Life Sciences Commons^™

Management And Characterization Of Root-Knot Nematode (Meloidogyne Spp.) In Kentucky High Tunnels, Victoria Bajek

Theses and Dissertations--Plant and Soil Sciences

Kentucky is one of the most active adopters of high tunnels in the United States. Across the state, high tunnel growers have reaped the benefits of greater marketable yields, season extension, and protection from harsh weather. However, the high tunnel environment has increased soil temperatures and intensive crop production which has the potential to encourage root-knot nematode (RKN; Meloidogyne spp.) infestations. The extent and distribution of RKN in Kentucky were previously unknown. Two on-farm trials in infested high tunnels were conducted to determine whether grafting with RKN-resistant tomato rootstock is a viable management strategy. A statewide soil census to determine …

Building A Kentucky Baguette: Agronomic Traits, Bread Baking Quality Measurements, And Sensory Evaluation Of Modern And Landrace Wheat Cultivars Grown Under Conventional And Organic Nitrogen Management, Bryan Brady

Theses and Dissertations--Plant and Soil Sciences

The demand by artisan bread bakers across the United States for local wheat varieties has increased in recent years. The southeast is traditionally a soft winter wheat (SWW) region, producing low gluten flours more suitable for biscuits and cookies. Recently, hard winter wheat (HWW) varieties have been bred to produce acceptable yields in the high humidity environment of the southeastern United States. Artisan bread bakers in Kentucky would like to create a niche food value chain benefitting farmers, small-scale millers, bakers, consumers, and their local and regional food systems (LRFS). The increased demand and the availability of adapted hard wheat …

Effects Of Fungicide Programs And Lower Leaf Removal On Wrapper Leaf Production In Connecticut Broadleaf Cigar Wrapper Tobacco, Caleb Haygan Perkins

Theses and Dissertations--Plant and Soil Sciences

In recent years, there has been increased demand for natural leaf cigar wrappers. Kentucky and Tennessee have been of recent interest as a new area for Connecticut Broadleaf production. Initial production experiences have shown that late-season frogeye leaf spot caused by the pathogen Cercospora nicotianae Ellis & Everh. may result in ‘green spot’ in cured leaf and cause a significant problem for producers of Connecticut Broadleaf cigar wrapper tobacco. Field trials were established in 2021 at Princeton, KY and 2022 in Mayfield, KY and Springfield, TN to evaluate effects of fungicide programs and lower leaf removal on wrapper production and …

Comparison Of Botanical Composition Methods And Change Over Time In Kentucky Pastures, Echo Elizabeth Gotsick

Theses and Dissertations--Plant and Soil Sciences

Botanical composition of pastures has been measured with numerous methods over the last century, but there have been limited direct comparisons between methods. The objective of this study was to compare botanical composition methods, to determine the most accurate and efficient method, and to access pasture composition change over time. Six farms with two pastures each were monitored across the state of Kentucky. Sampling occurred fall 2020 through fall 2022, three times a year using the following methods: step point, visual estimation, occupancy grid, and point quadrat (used as a reference method). The occupancy grid showed the highest similarity to …

Evaluation Of Chemical Control Options, Environmental Factors, And Management Practices Associated With Angular Leaf Spot (Pseudomonas Syringae Pv. Tabaci), Andrea Brooke Webb

Theses and Dissertations--Plant and Soil Sciences

Pseudomonas syringae pv. tabaci tox^- is the causal agent of angular leaf spot in dark tobacco. Since 2015, angular leaf spot has become the most significant foliar disease in dark tobacco production in Kentucky and Tennessee. Dark tobacco producers utilize one main tool, streptomycin sulfate, for the management of this bacterial disease. Resistance to streptomycin sulfate in P. syringae pv. tabaci isolates from dark tobacco fields in western Kentucky was first observed in 2015.

Field spray trials were developed to evaluate the efficacy of alternative active ingredients compared to the grower’s standard, streptomycin sulfate. Two separate field trials were …

Winter Rye (Secale Cereale L.) Management And Production Profitability In Kentucky, And Heritability Of Sensory Attributes, Elzbieta Szuleta

Theses and Dissertations--Plant and Soil Sciences

Winter rye (Secale cereale L.) is a small grain crop characterized by outstanding tolerance to drought, low temperatures, soil salinity and relatively low nutritional requirements. Rye is widely used as a cover crop, well known for its deep root system and outstanding nitrogen scavenging ability. This crop is widely used as a feed for livestock but also it is beneficial in human nutrition. Because of its versatile use, nutritional benefits and unique aroma and flavor, especially for bread and whiskey, there is an increasing interest in this crop in the United States. Unfortunately, rye grain production in the United …

Improving Baking Quality Of Soft Red Winter Wheat In Kentucky Through Breeding And Sulfur-Nitrogen Fertility Management, Maria Paula Castellari

Theses and Dissertations--Plant and Soil Sciences

Soft Red Winter (SRW) wheat is an important crop grown on about 400,000 acres in Kentucky as a pivotal cash crop in the 3-crops-in-2-years rotation of corn, wheat, and soybean. The humid environment of Kentucky generates a high yielding wheat crop, with low protein concentration and weak gluten strength. This wheat is mainly sold to millers and used by the industry for cakes, pastries, cookies, and crackers. Conversely, there is a rapidly growing interest in identifying other value-added markets for this wheat different to commodity commercialization, such as artisan-baked goods and craft-distilled beverages. Evaluating the quality characteristics of wheat grown …

Molecular Analysis Of Epigenetic Memory Of Stress Establishment And Long-Term Maintenance In A Perennial Woody Plant, Jia Wen Tan

Theses and Dissertations--Plant and Soil Sciences

Plants adapt to extreme environmental conditions through physiological adaptations, which are usually transient. Recent research has suggested that environmental conditions can activate a memory of stress that can result in a primed response to subsequent stress events. While the effect of priming has been observed in many plants, the underlying mechanisms are puzzling and seldom studied. A large body of research has been developed in the last decade linking response to stress, stress priming, and memory of stress with epigenetic mechanisms. This understanding of plant epigenetics has opened the door to the application of epigenetics to crop improvement, such as …

Manipulating Species Diversity: Environmental Impacts In Row Crop, Livestock, And Grassland Agroecosystems, Alayna A. Jacobs

Theses and Dissertations--Plant and Soil Sciences

The diversity of living species in an agroecosystem affects both natural resources and agricultural production efficiency. The rise of managed plant monocultures has allowed agricultural yields to increase over time. However, simplifying agroecosystems affects the capacity of the system to sustainably provide clean air, water, and productive soils essential for continued food and fiber production. This dissertation manipulates species diversity in row crop and forage agroecosystems prevalent in the Eastern United States and tracks the associated environmental and agricultural production consequences.

In row crop agroecosystems, increasing plant diversity with winter cover crops has been suggested as a strategy to increase …

The Impact Of Plant Secondary Metabolites On Auxin And Cytokinin Signaling, Timothy E. Shull

Theses and Dissertations--Plant and Soil Sciences

Secondary metabolites are a broad class of specialized compounds that mediate plant-environment interactions and mitigate stress. It is increasingly clear that many phenylalanine-derived secondary metabolites are nearly indispensable for plant survival and that plants adjust their growth according to their secondary metabolic outputs. Consequently, many phenylalanine-derived secondary metabolites have influence over hormone activity. For instance, multiple phenylpropanoid intermediates and catecholamines alter the sensitivity of plants to the central hormone auxin, which in concert with cytokinin directs most aspects of plant growth and development. This dissertation reviews previous research on the influence of phenylpropanoid intermediates and catecholamines on plants, with a …

Remote Sensing For Quantifying C3 And C4 Grass Ratios In Pastures, Jordyn Alyssa Bush

Theses and Dissertations--Plant and Soil Sciences

The following studies investigate the accuracy and practicality of exploiting the color dichotomy present between C₃ and C₄ grass species to estimate their respective proportions from drone or camera captured imagery. Understanding the proportions of C₃ and C₄ grasses in pastures is vital to sound decision making for livestock production. The ability to monitor these proportions remotely will also allow for large scale monitoring as well as detection of changes in botanical composition over time and in response to weather events, management, or climate change. A free green canopy cover (GCC) analyzing software, Canopeo, was used …

Understanding The Cellular And Physiological Mechanisms Of Fertilization And Early-Stage Seed Development, Mohammad Foteh Ali

Theses and Dissertations--Plant and Soil Sciences

Flowering plants have evolved a unique double-fertilization process. Two sperm cells fuse with two female gametophytic cells, the egg and central cells within the ovule, giving rise to the embryo and endosperm, respectively. Sperm cells in flowering plants are nonmotile and delivered in close proximity to the egg and central cells by the pollen tube. Flowering plants have established filamentous actin (F-actin) based sperm nuclear migration system for successful fertilization. Prior to fertilization, the female gamete forms a mesh-like structure of F-actin that shows constant inward movement from the plasma membrane periphery to the center of the cell where the …

Regulatory Mechanisms In Arabidopsis Embryogenesis, Sanjay Joshi

Theses and Dissertations--Plant and Soil Sciences

Plants have amazing regeneration properties with single somatic cells, or groups of cells able to give rise to fully formed plants. One means of regeneration is Somatic Embryogenesis (SE), by which an embryonic structure is formed that “converts” into a plantlet. Somatic embryogenesis has been used as a model for zygotic processes that are buried within layers of maternal tissues. Understanding mechanisms of somatic embryo induction and development are important as a more accessible model for seed development. We rely on seed development not only for most of our caloric intake, but also as a delivery system for engineered crops …

Survey Of Herbicide Resistance And Seed Fate Of Italian Ryegrass (Lolium Perenne Ssp. Multiflorum) In Kentucky, Amber Lynn Herman

Theses and Dissertations--Plant and Soil Sciences

Herbicide resistance is not a new problem for farmers in Kentucky, although the identification of herbicide resistant weed species continues to increase. Italian ryegrass (Lolium perenne ssp. multiflorum) is a problematic weed in Kentucky’s soft red winter wheat that has historically been documented as herbicide resistant in isolated locations. A greenhouse herbicide screen was conducted to further understand the level of glyphosate, pinoxaden, and pinoxaden plus fenoxaprop resistance in Kentucky Italian ryegrass populations. The preliminary screen and dose responses indicate there is one Italian ryegrass population resistant to glyphosate and two populations resistant to pinoxaden along with pinoxaden …

An Evaluation Of Eragrostis Tef For Future Cultivar Development, Eric Wayne Luteyn

Theses and Dissertations--Plant and Soil Sciences

The many benefits of utilizing teff (Eragrostis tef) as small grain is well documented in journal publications. Over time the domestication of this species has become essential to the diets of the local population and the livestock living in the African highlands. Current research points to a high diversity of trait characteristics found in many teff populations and the potential utilization of these traits to increase desirable characteristics in both grain and forage varieties. With the overarching goal of adding to what is already known about teff, this study evaluates the different traits that are of interest to …

Building Capacity For Cool Season Vegetable Production In Kentucky: Strengthening Supply Chains Through Crop Model Development And Analysis Of A Farm-To-Institution Market, Chelsea Jo Maupin

Theses and Dissertations--Plant and Soil Sciences

Cool season vegetable crops are suitable for both direct-to-consumer (DTC) and farm-to-institution (FTI) markets in central Kentucky. However, crop planning for predictable harvest is challenging. Seasonality issues can be detrimental to FTI markets wherein institutions require consistent, large volumes of product. This research investigates both production and market aspects of salad crops in central Kentucky, through development of growing degree day (GDD) crop models for loose-leaf lettuce (Latuca sativa), carrots (Daucus carota subsp. sativus), and spinach (Spinacia oleracea), and through a case study analysis for a FTI initiative called the Salad Bar Program. Simple …

Optimizing Nitrogen Management In Winter Wheat Production Systems For Improved Bread Baking Quality, Ammar Sadiq Mahdi Al Zubade

Theses and Dissertations--Plant and Soil Sciences

In Kentucky, there is growing interest among farmers to produce high protein and strong gluten wheat that is suitable for bread baking to meet the demand of local artisanal bakers. Soft red winter wheat (SRW) is the most commonly wheat grown in the state and throughout the Southeastern US. Flours produced from SRW are relatively low in grain nitrogen (N) due to the region’s moderate winters and warm humid conditions during grain filling. As such, SRW is used in baking products where lower protein flours are preferred, such as cookies, cakes, pastries and crackers. Unlike SRW, hard red winter wheat …

Quantifying Crop Phenology For Food Sustainability Under Climate Change: Integration Of Remote Sensing, Machine Learning, And Ecosystem Modeling, Yanjun Yang

Theses and Dissertations--Plant and Soil Sciences

Climate change is projected to continue and accelerate significantly in the future if global greenhouse gas emissions are not curbed. Previous studies have shown that crop growth and production in agroecosystems are primarily determined by the weather conditions over the growing season. Crop phenology represents one of the most critical indicators in determining crop yield and adjusting the adaptation of crops to climate change. It provides essential information for monitoring and modeling crop growth dynamics and productivity. Therefore, understanding and quantifying the impacts of climate change on crop phenology and then agricultural production is crucial to formulate feasible climatic adaptation …

Enhancing Agroecosystem Phosphorus Management: Root Phenotyping And Decomposition For Improved Phosphorus Cycling, Rebecca Kay Mcgrail

Theses and Dissertations--Plant and Soil Sciences

Plant roots are often overlooked when making nutrient management decisions. Evaluating differences in P acquisition strategies and cycling resulting from years of shoot-specific plant breeding will aid in reducing fertilizer inputs, with the ultimate goal of improving economic sustainability of crop production and preservation of ecosystem services. To achieve this goal, this research screened a diverse panel of winter wheat cultivars that included old and modern, dwarfed and wild type varieties for physical and chemical root phenotypes related to P acquisition. Old cultivars had larger root systems with more roots that grew two times faster than intermediate/modern cultivars. Wild type …

Genomic Selection Strategies To Predict Grain Yield And Disease Resistance Traits In A Wheat Breeding Program, Virginia Laura Verges

Theses and Dissertations--Plant and Soil Sciences

Genomic selection (GS) is a form of marker-assisted selection (MAS) that simultaneously estimates all locus, haplotype or marker effects across the entire genome to calculate genomic estimated breeding values (GEBVs). Since its inception, it has had the attention of breeders keen on finding tools to accelerate genetic gain and reduce phenotyping costs in the breeding program. A first objective of this study was to evaluate strategies to design the training population (TP) and validating population (VP) to estimate GEBVs for grain yield and agronomic traits for wheat breeding lines. Our results demonstrate that, despite the small family size, an approach …

Leveraging Chemical And Computational Biology To Probe The Cellulose Synthase Complex, B. Kirtley Amos

Theses and Dissertations--Plant and Soil Sciences

Cellular expansion in plants is a complex process driven by the constraint of internal cellular turgor pressure by an expansible cell wall. The main structural element of the cell wall is cellulose. Cellulose is vital to plant fitness and the protein complex that creates it is an excellent target for small molecule inhibition to create herbicides. In the following thesis many small molecules (SMs) from a diverse library were screened in search of new cellulose biosynthesis inhibitors (CBI). Loss of cellular expansion was the primary phenotype used to search for putative CBIs. As such, this was approached in a forward …

Optical Seed Sorter-Based Selection Lowers Deoxynivalenol Accumulation In Soft Red Winter Wheat, William Jesse Carmack

Theses and Dissertations--Plant and Soil Sciences

Fusarium head blight (FHB) of wheat (Triticum aestivum L.) results in discolored grain contaminated with deoxynivalenol (DON). DON accumulation, an indicator of FHB resistance, can be quantified and used as the basis for direct phenotypic selection, but testing is expensive. The primary objective of this study was to evaluate an optical seed sorter as an alternative to DON testing for FHB resistance breeding. Three hundred F4 derived soft red winter wheat (SRWW) breeding lines were grown in an inoculated FHB nursery over several years in Lexington, KY. Grain from each breeding line was sorted using an optical seed sorter calibrated …

Evaluation Of Corn Agronomic Management Practices Following A Rye Cover Crop, Daniel John Quinn

Theses and Dissertations--Plant and Soil Sciences

Fall implementation of a rye (Secale cereale L.) cover crop (RCC) prior to spring corn (Zea mays L.) planting is a management practice used to improve soil conservation, water quality, and limit herbicide dependence. However, corn growth and yield following a RCC is often reduced due to early-season nitrogen (N) stress and decreased plant emergence, which can limit RCC adoption. The objective(s) of this research were to evaluate corn agronomic management practices (e.g., N and seeding rate management, in-furrow (IF) starter use) following a RCC and determine which management practices can be used to limit corn stress following …

Incorporation Of Summer Annual Mixtures Into Grazing Systems In Kentucky, Kelly Marie Mercier

Theses and Dissertations--Plant and Soil Sciences

Utilizing summer annual grass-legume forage mixtures has the potential to improve forage yield and nutritive characteristics, and/or animal performance during times when cool-season pasture growth is limited by high temperatures. Legumes can utilize atmospheric nitrogen, which can increase crude protein and forage digestibility in mixtures. As nitrogen application generally improves both the yield and nutritive characteristics of summer annual forages, but can have a negative effect on legume competitiveness, nitrogen fertilizer recommendations for legume-containing summer annual mixtures are not well established.

Two experiments were conducted to determine the feasibility of utilizing summer annual mixtures in Kentucky, USA. The first experiment …

Efficacy And Mechanism Of Acs811 In Tomato Immune Responses, Layne Ellen Harris

Theses and Dissertations--Plant and Soil Sciences

Biologicals are increasingly becoming an important part of sustainable integrated pest management in agricultural crop production and encompass a wide variety of products with varying degrees of efficacy and available research data. As biologicals become more integrated into commercial production systems, it is critical to rigorously evaluate biological product efficacy and mode(s) of action in crops. The better that biologicals are understood in terms of effective application, integration into commercial programs, and their specific mechanisms in crop growth and protection, then the greater the opportunity for increasing yields and food security.

ACS811 is a microbial fermentation-based biological product from Alltech …

Evaluation Of The Influence Of Dicamba Exposure On Crop Injury And Canopy Closure Of Glufosinate Resistant Soybean, Zachary K. Perry

Theses and Dissertations--Plant and Soil Sciences

Dicamba-resistant soybean along with lower volatility dicamba formulations have been introduced in an attempt to control herbicide resistant weeds such as Amaranthus palmeri. This introduction has increased the amount of dicamba being applied later in the growing season increasing the prevalence of dicamba off-target movement. Dicamba damage was simulated by applying low rates of dicamba directly on soybeans at rates (0.5 g ae ha^-1, 1 g ae ha^-1 and 5 g ae ha^-1 dicamba) and five-exposure timings from June 1 to July 10. The experimental design was a randomized complete block with four replications at …

Nickel Speciation, Microbial Community Structure, And Chemical Attributes In The Rhizosphere Of Nickel Hyperaccumulating And Non-Accumulating Plants Growing In Serpentine Soils, James W. Morris

Theses and Dissertations--Plant and Soil Sciences

Serpentine soils are formed from weathering of serpentinite, the ultramafic parent material that provides serpentine soils with their unique identity. Weathering of serpentinite results in a plethora of edaphic factors that impose strong selection pressures on plant life, with high magnesium (Mg) to calcium (Ca) ratio, low fertility, and high levels of geologically derived metals such as cobalt (Co), chromium (Cr), and nickel (Ni). Appropriately, plant life on serpentine soils is often specialized, sparse, and endemic which in turn affects the ecosystems that develop on serpentine soils from the landscape scale down to the physiology of their inhabitants. At the …

Plant-Soil Interactions Dominate Soil Microbial Respiration And Soil Organic Carbon Sequestration In A Subtropical Moist Evergreen Broadleaved Forest In China, Zhijie Yang

Theses and Dissertations--Plant and Soil Sciences

Tropical forest soils contain one-third of global soil carbon (C). The warm and moist climate in tropical forests leads to rapid soil organic carbon (SOC) decomposition, with the highest soil microbial respiration rates in the world, so even a slight change in soil C and microbial respiration could affect atmospheric carbon dioxide concentration. However, there remains a lack of understanding of the mechanisms driving microbial respiration in tropical forests, due to different climate and biophysical drivers compared to temperate or boreal forests. Furthermore, forest conversions (from natural forests to plantations) are most widespread in tropical regions, leading to a loss …

Improving Kentucky's Winter Wheat And Double Crop Soybean Rotation, Katherine Susan Rod

Theses and Dissertations--Plant and Soil Sciences

The winter wheat double crop soybean rotation is an economically viable rotation for Kentucky farmers. Recent decreases in commodity prices has warranted the need to evaluate intensive management practices that can increase yields and profitability in this crop rotation. There were three goals of this dissertation: 1.) identify management practices that would decrease deoxynivalenol (DON) in harvested wheat grain and increase wheat heading and anthesis uniformity, 2.) evaluate double crop soybean planting timing and identify intensive management practices to increase seed yield, and 3.) determine the profitability of these management options. These studies were conducted in Princeton KY between 2016 …

In Pursuit Of Understanding Barrel Variation: Surveying The Lignocellulose Composition And Content Changes In Quercus Alba Barrel Staves During Cooperage And Bourbon Whiskey Maturation, Jarrad Wade Gollihue

Theses and Dissertations--Plant and Soil Sciences

Bourbon whiskey is a distilled spirit which is a uniquely American with several legal requirements including 1) the major grain in the mash is corn, 2) must be aged in a new charred white oak barrel, and 3) made in the United States of America. Kentucky is the whiskey historical home, producing most of the bourbon in the United States. Interest in whiskey has developed a need to understand more about the underlying chemistry of bourbon. The charred white oak barrel used in bourbon production is of substantial interest because the barrel has been implicated in giving American whiskey its …