Life Sciences Commons^™

Effects Of Habitat Alteration On Ecomorphology Of Fish Communities In A Restored Stream, Carl Anthony Favata

Masters Theses

Decades of anthropogenic pressure have devastated lotic ecosystems across the riverscapes of North America, resulting in degradation of critical habitat and contributing to sharp declines in biotic integrity. In response, local stream restoration projects have increased in frequency. However, little effort has been allocated to monitoring and project success has been limited. In addition, restoration projects typically focus on ecological effects above the population-level, while relationships with physiological processes are seldom assessed. Lessons from the long-term restoration and ecological monitoring of Kickapoo Creek highlight some of the complex dynamics driving reach-scale restoration projects. Following instream restoration, I predicted that alterations …

Seeing Red In A Sea Of Green: Anthocyanin Production In A Carnivorous Plant, Pinguicula Planifolia, Jenna Annis

Masters Theses

The Southeastern United States is a biological hot-spot for carnivorous plants, with over half of the North American species occurring along the Gulf Coast. Pinguicula planifolia Chapman is one of six carnivorous perennial butterwort species found in the Florida Panhandle. Among these species, only P. planifolia expresses a distinct variation of red coloration on its leaves. The functional role of foliar anthocyanins may include stress response to drought and nutrient deficiency, herbivory defense, free radical scavenging, and photoprotection. Carnivorous plant leaves face strong selection pressures to optimize prey capture and nutrient absorption. Given the frequency of these red pigments in …

Diversity Of The Beneficial Bacterium Oxalobacter Formigenes Isolated From The Human Gut, Karen Shaw

Masters Theses

Oxalobacter formigenes is an anaerobic, oxalate degrading organism that colonizes in the mammalian intestinal tract. Currently, O. formigenes is divided into two groups via PCR of the oxc gene. Pulsed field gel electrophoresis (PFGE) is a technique used to resolve large pieces of DNA. Typically, PFGE is used to identify differences between strains for pathogenic bacteria, but this study sought to use it to further understand the diversity of a probiotic organism. This study aimed to develop a methodology for utilizing PFGE to examine O. formigenes. The methodology involved lysing O. formigenes cells in plugs, first in proteinase K, …

Assessing The Feasibility Of Wastewater Effluent As A Nutrient Source For Algae In The Context Of Biofuel Production, Justin Ryan Dore

Masters Theses

Algae have the potential to support the production of biodiesel due to their ability to produce large volumes of oils in relatively small footprints. However, algae production for biodiesel is hampered by the expenses associated with water and nutrients required for sufficient growth. A possible source of inexpensive and nutrient-rich water is the effluent of traditional wastewater treatment facilities. If wastewater effluent can support algae growth, the added benefit of reducing high nutrient loads to natural water systems can be realized. The overarching goal of the current research was to explore the feasibility of growing algae (Scenedesmus) using wastewater effluent …

Sampling Efficiency, Population Characteristics, And Potential Impacts Of Harvest Regulations On Three Riverine Species Of Catfish, Zachary Adam Mitchell

Masters Theses

No abstract provided.

Genetic Structure And Diversity Of Channel Catfish (Ictalurus Punctatus) In Three Large Midwestern Rivers, Vaclav Alexei Sotola

Masters Theses

Little information is available regarding the genetic structure and diversity of sportfishes in large rivers, which can be vital to continuing the sustainable exploitation of these fisheries. Additionally, impoundments often have vast impacts on riverine systems. These impacts include altering the flow regime, changing the nutrient load, and preventing migratory fish from reaching their spawning grounds. If fishes are prevented from reaching their spawning grounds, their genetic diversity and structuring could begin to change relative to historic measures, potentially decreasing their fitness and ability to survive. I screened microsatellite loci to assess the genetic population structure and diversity of channel …

Stopover Ecology Of Neotropical Migratory Songbirds In The Northern Yucatan Peninsula, Mexico, Lauren E. Solomon

Masters Theses

Chapter I. Full-service hotels, convenience stores or fire escapes? Evaluating function of stopover sites for Neotropical migrants in the northern Yucatan Peninsula

Nearctic-Neotropical migratory songbirds incur the highest mortality rates during their annual migrations. Migratory songbirds use a network of stopover sites to rest, refuel, or seek refuge during times of poor weather conditions; and the time and energy expended at these sites exceeds that of migratory flight. In order to conserve stopover sites with the highest value to Neotropical migrants, a conceptual framework was developed to classify stop over sites into three functional categories based on their function for …

Quantifying Bat Detection Survey Methods And Activity Patterns, Tara C. Hohoff

Masters Theses

Bats have an astonishing diversity and provide vital ecosystem services in an array of different niches. In North America, most species of bats are insectivores and tend to be frequently overlooked for their important ecosystem role providing insect control. As bat populations have declined in recent years, farmers, land managers, conservationists, and bat enthusiasts have wondered what we can do to protect our local bat populations. As a first step, we need to develop methods that more effectively survey for rare species of bats. By performing inefficient surveys, we are doing a disservice to our funding agencies providing misinformation that …

Artificial Neural Network Approach To Predict Blast-Induced Ground Vibration, Airblast And Rock Fragmentation, Raymond Ninnang Tiile

Masters Theses

"Blasting has been widely used as an economical and cheap way of rock breakage in mining and civil engineering applications. An optimal blast yields the best fragmentation in a safe, economic and environmentally friendly manner. The degree of fragmentation is vital as it determines to a large extent the utilization of equipment, productivity and mill throughput. Explosive energy, besides rock fragmentation, creates health and safety issues such as ground vibration, air blast, fly rock, and back breaks among others. As a result, the explosive energy impacts structures and buildings located in the vicinity of the blasting operation, and causes human …

Impact Of Transcription Factors On Fibroblast Specific Gene Silencing In Somatic Cell Hybrids, Tania Ray

Masters Theses

As totipotent cells differentiate to specific cell types in multicellular organisms, certain sets of genes are turned off (gene silencing/gene extinction) while others are turned on (gene activation). Cell type specific gene silencing and gene activation is the basis of cell differentiation. Somatic cell hybrids which are produced by fusing different types of somatic cells from two different tissues have been used as a valuable resource to discern the phenomenon of lineage- specific gene extinction. Identification of regulatory factors that mediate gene extinction in hybrids are key to understanding regulatory mechanisms that govern cell differentiation in a multicellular organism. Transcription …

Characterization Of Insertion Sequence Is605 In Halanaerobium Hydrogeniformans, Michael C. Sadler

Masters Theses

"Insertion sequences are the smallest prokaryotic transposable elements. These genes play a significant evolutionary role by promoting genome plasticity. Insertion sequences are highly diverse elements that have largely been uncharacterized. As such, the ability to accurately identify, annotate, and infer genomic impact of insertion sequences is lacking. The study of new insertion sequences contributes knowledge to their annotation and evolution. Halanaerobium hydrogeniformans is a unique organism with an abnormally high number of insertion sequences. A family of insertion sequences, IS200/605, showed several interesting distinctions from other elements in the genome, including severe open reading frame degradation, and was characterized in …

Demographics And Parasites Of Spotted Bass In The Wabash River, Evan C. Boone

Masters Theses

Spotted Bass Micropterus punctulatus Rafinesque are a popular sport fish primarily found in the streams and reservoirs of the south. The Wabash River, a large tributary of the Ohio River, contains a naturally reproducing population on the northern boundary of their range. Currently, the lower Wabash River is monitored using two different sampling designs, the Long Term Electrofishing Program monitors community assemblages using stratified random sampling whereas the Illinois Department of Natural Resources uses a fixed sampling design. Due to the wide distribution but low abundance of Spotted Bass throughout this drainage, captures from each design were compared to assess …

Successional Changes In Leaf Nutrient Concentrations Of Woody And Herbaceous Species, Daniel Walter Kuchta

Masters Theses

Leaf nutrient concentrations are an example of a functional trait, a trait that can be used to understand community dynamics by observing how plants interact with their environment. I explored how leaf nutrient concentrations were affected over successional time by environmental changes. The majority of prior research on functional traits focuses on either woody or herbaceous species, but not both life forms simultaneously. To address this, I also explored the successional changes to leaf nutrient concentrations, separating the plant community into woody and herbaceous species.

Healthy, mature leaves were taken from 122 taxa of woody and herbaceous species in a …

Diel And Seasonal Patterns Of Channel Catfish Movement And Habitat Use In The Lower Wabash River, Hanna Gibbs Kruckman

Masters Theses

Channel catfish Ictalurus punctatus are commonly found throughout the Mississippi River basin and support commercial and recreational fisheries in many large river systems. Understanding population demographics as well as movement patterns and habitat usage can provide a more holistic approach to species management and conservation. Within a 16-km stretch of the lower Wabash River, 27 channel catfish were implanted with acoustic transmitters to monitor fine scale movement and habitat use from September 2014 through April 2016. Channel catfish were located using active tracking during two types of tracking events. Site tracking occurred only during daylight hours and diel tracking monitored …