Life Sciences Commons^™

Quantifying Wastewater Contributions To The Upper Clark Fork River, Claire Utzman

Graduate Student Theses, Dissertations, & Professional Papers

Though algae are at the base of food webs in many rivers, large algal blooms are increasing in frequency and can cause problems with nutrient cycling, depletion of oxygen supplies at night, and release of toxic chemicals. One leading cause of algal blooms is nutrient loading into rivers, and controlling nutrient release in wastewater is one approach that can help limit algal growth. To reduce the intensity of algal blooms in the Clark Fork River in western Montana, numeric nutrient standards were put in place that regulated the release of the nutrients nitrogen and phosphorus into the river from wastewater. …

A Tale Of Two Working Landscapes, Sage C. Sutcliffe

Graduate Student Theses, Dissertations, & Professional Papers

No abstract provided.

Bloom: A Microbial Self-Portrait, Emily Lauren Mulvaney

Graduate Student Theses, Dissertations, & Professional Papers

No abstract provided.

Csn-5: A Tumor's Friend Or Foe In The C. Elegans Germline?, Kellie C. Kuch

Graduate Student Theses, Dissertations, & Professional Papers

The COP9 signalosome is a highly conserved eukaryotic complex regulating protein degradation via deneddylation of Cullin-RING E3 ligases. CSN5, the COP9’s fifth component, contains the catalytically active domain for CSN deneddylation. The complex is inactive without CSN5; however, CSN5 engages in COP9-independent binding with several other proteins, typically promoting either destruction or stabilization of its partners. Many of its confirmed interaction partners are also implicated in tumorigenesis (prominent examples being p27 and p53) and a complex cancer interactome has been established for CSN5. Additionally, CSN5 overexpression has been documented in a staggering array of cancers of diverse origins. This discovery …

The Birds And The Trees: Quantifying The Drivers Of Whitebark Pine Decline And Clark's Nutcracker Habitat Use In Glacier National Park, Vladimir Kovalenko

Graduate Student Theses, Dissertations, & Professional Papers

Whitebark pine (Pinus albicaulis), recently listed as threatened under the Endangered Species Act, is in steep decline in Glacier National Park, Montana, USA due to the non-native pathogen Cronartium ribicola, causal agent of the fatal disease white pine blister rust. A sample of the park’s population suggests that approximately 70 percent of whitebark pines have died, while 65 percent of the remaining trees are infected. Using landscape and climate variables, we show how geographic location, elevation, aspect, solar radiation, relative humidity, and snowpack interact with tree diameter to affect mortality, disease incidence, cone production, and regeneration. We also examine how …

Individual And Population Responses To Hydrologic Variability In A Headwater Stream Salamander, Madaline Cochrane

Graduate Student Theses, Dissertations, & Professional Papers

Understanding how organisms respond to environmental variability is a central goal in ecology – a goal made even more pressing by the herculean challenge global climate change presents to all organisms. Climate change is increasing the frequency and intensity of floods and droughts, which will likely have disproportionate effects on freshwater organisms. Many stream-associated species have multi-stage life histories. However, we lack an empirical understanding of life history and movement responses of these organisms to hydrologic disturbances, and how these responses may influence demographic rates. In my dissertation, I used a combination of growth, developmental, movement, and demographic data to …

A Comparison Of Barriers To Traditional And Home-Based Cardiopulmonary Rehabilitation Participation: Potential Implications For The Maintenance Phase, Erin Rose Madison

Graduate Student Theses, Dissertations, & Professional Papers

Cardiac rehabilitation provides medically supervised therapeutic exercise and multifaceted risk factor modification as a form of secondary prevention for cardiovascular disease, a persistent leading cause of morbidity and mortality in the United States and internationally. Despite robust evidence of compelling patient outcomes, decreased disease recurrence, and the indications from the ACC/AHA endorsing phase II cardiac rehabilitation (CR) as a crucial aspect of recovery from cardiac events and qualifying conditions, CR is widely underutilized. A variety of patient barriers can serve as mitigating factors to CR referral, enrollment, participation, and completion contributing to, in part, the underutilization of CR. Barriers to …

"Our Loons": Participant Attachments And Motivations Within A Community-Based Monitoring Program, Taylor Tewksbury

Graduate Student Theses, Dissertations, & Professional Papers

Organizations can benefit from understanding person-place relationships and volunteer motivations as they recruit and sustain involvement in their community-based monitoring (CBM) programs. Place attachment, or the bond between people and their meaningful environments, is one lens through which to explore these relationships. Past studies have associated place attachment with environmentally responsible behaviors (ERB), such as CBM involvement. However, few studies have explored the relationship between place attachment and CBM in the context of volunteers’ attachment to the species of study.

The purpose of this research study was to explore the place-based relationships and motivations among volunteers of the Loon Preservation …

Predicting Mountain Lion Resource Selection And Abundance In North America, William Connor O'Malley

Graduate Student Theses, Dissertations, & Professional Papers

The relationship between habitat quality and density is well documented in lower trophic levels but to what extent it can be extended to higher trophic levels is unknown. I tested the relationship between habitat quality, home-range size and density using a wide-ranging, well-studied, top carnivore, the mountain lion (Puma concolor). First, I created a second-order resource selection function (RSF) for mountain lions in their current North American range using GPS collar data from 476 individuals in 20 study sites and remotely-sensed landscape data. I used the RSF and home range estimates derived from collared animals to quantify mountain …

Association Between Baseline Field Test Performance And Match Physical Performance In D1 Female Soccer Players, Benito Joel Cecenas

Graduate Student Theses, Dissertations, & Professional Papers

Background: Fitness testing is utilized by numerous soccer programs as a means for evaluation of player physical capacity. Previous literature has shown Yo-Yo Intermittent Recovery Test Level 1 (YYIR1) performance is associated with match physical performance in elite adult and youth soccer players. Until now, these relationships have not been investigated in the collegiate soccer setting, despite the YYIR1 being regularly utilized at the collegiate level to determine eligibility for competition, influence playing time, and to assess adaptation to training programs. For these reasons the association between the YYIR1 and match physical performance was investigated in women’s collegiate soccer.

Aims: …

Umfc 140 A Comprehensive Case Report, Daniel D. Warila

Graduate Student Theses, Dissertations, & Professional Papers

UMFC 140 Is a teaching specimen from purchased from China assigned To Daniel Warila B.A. for the purpose of a Forensic case study. This case study covers a wide variety of forensic procedures that can be applied to these remains. The forensic procedures used consist of past as well as current procedures were applied to the remains with the resulting findings discussed and analyzed. This case study was focused on finding as many forensic answers as possible on the remains in their current condition.

Responses Of Elk To Mangement Actions And Hunter Access In The Northern Sapphire Mountains, Montana, Usa, Peter O. Mumford

Graduate Student Theses, Dissertations, & Professional Papers

Chapter 1

Regulation of rifle hunting of adult female elk is the main tool wildlife managers use to manage the abundance of elk (Cervus canadensis) in the western United States. However, elk are increasingly located in areas where hunting access is restricted during rifle-hunting season, decreasing the ability of managers to reduce elk abundance through hunter harvest. Management actions that restricted hunter access in a 26 km2 area and closed 62 kms of predominantly 2-wheel motorized routes occurred in the northern Sapphire Mountains, Montana, USA. We collected data on elk locations before and two years after the management actions and …

How Aquatic Insects Mitigate Temperature-Oxygen Challenges Via Behavioral, Morphological, And Physiological Plasticity, Jackson H. Birrell

Graduate Student Theses, Dissertations, & Professional Papers

How do organisms respond to environmental challenges and to environmental change? These questions occupy a central place in ecology and answering them will help us to understand why species live where they do, how organisms are affected by human activities, and, ultimately, how to choose among alternative conservation strategies. These questions are difficult, however, for two reasons. First, environmental challenges often involve multiple, interacting stressors. Second, individual responses can be modified by behavioral, morphological, and physiological plasticity. My dissertation investigates how interactions between temperature and oxygen influence the performance and survival of aquatic insects and how plasticity allows individuals to …

Assessing The Impact Of Parallel Burnout Fires On Flank Rate Of Spread, Erik Borke

Graduate Student Theses, Dissertations, & Professional Papers

The effects of flank-parallel suppression fires on the local rate of spread (ROS) of freely burning headfires through fully cured homogeneous grass fuels are assessed. Data sets include: one thermal image stack of a prescribed burn recorded by drone, and a suite of simulation experiments carried out in Wildland Urban Interface Fire Dynamics Simulator (WFDS). A new approach to computing ROS, curvature proxy driven normals to convex polylines, was developed to carry out this analysis. ROS time series depicting flank acceleration of the prescribed burn and simulation experiments, observable under coarse and fine directional classification schemes respectively, are the primary …

Evaluating The Relative Influence Of Soil Water Potential, Soil Moisture, And Vapor Pressure Deficit On Semi-Arid Vegetation Dynamics, Kayla R. Jamerson

Graduate Student Theses, Dissertations, & Professional Papers

Knowledge of vegetation’s response to soil water availability and atmospheric demand is critical to understanding the impact of climate change on semi-arid ecosystems. However, limited field-based research has been conducted to assess the relative importance of these drivers and previous research has simplified the assessment of soil water availability by relying on soil volumetric water content (VWC) as a primary control on plant growth, which, as opposed to soil water potential (Ψsoil), does not account for the effects of soil texture on plant available water. To address these gaps, we compared remotely sensed indicators of vegetation response to field based …

A Biophysical Approach To Modeling Elevational Range Shifts In Colorado Mammal Communities, Ryan T. Mahar

Graduate Student Theses, Dissertations, & Professional Papers

Species geographic ranges are shifting in the face of contemporary climate warming, and documenting range shifts is crucial to our understanding of the underlying drivers mediating movement in geographic range limits. Studies on elevational range shifts with climate change are beginning to accrue within the literature, though observed shifts are idiosyncratic and difficult to predict. Some species may respond to warming temperatures by shifting their range limits upslope, where temperatures are cooler owing to the adiabatic lapse rate. However, species may also respond to warming temperatures in an elevation-dependent manner: if changes in snow depth expose overwintering organisms to colder …

Vibes: A Workflow For Annotating And Visualizing Viral Sequences Integrated Into Bacterial Genomes, Conner J. Copeland

Graduate Student Theses, Dissertations, & Professional Papers

Bacteriophages are viruses that infect bacteria. Many bacteriophages integrate their genomes into the bacterial chromosome and become prophages. Prophages may substantially burden or benefit host bacteria fitness, acting in some cases as parasites and in others as mutualists, and have been demonstrated to increase host virulence. The increasing ease of bacterial genome se- quencing provides an opportunity to deeply explore prophage prevalence and insertion sites. Here we present VIBES, a workflow intended to automate prophage annotation in complete bacterial genome sequences. VIBES provides additional context to prophage annotations by annotating bac- terial genes and viral proteins in user-provided bacterial and …

Investigating Changes In Er-To-Golgi Protein Transport Following A Short Calcium Pulse: Roles Of Alg-2 And Peflin, Alaa Mohammed Yosri Shaheen

Graduate Student Theses, Dissertations, & Professional Papers

The ER-Golgi interface is a very dynamic environment that involves the movement of protein-loaded vesicles forward and backward. The movement of COPII-coated vesicles from the ER to the Golgi is the initial step in the movement of secreted, organellar, and cell surface proteins toward their final destinations. Many factors can regulate this step, including cytosolic calcium increases. In this study, we examined the effect of a transient calcium pulse on recruitment to ER exit sites of cargo proteins for ER export, the calcium-sensitive regulatory proteins apoptosis-linked gene 2 (ALG-2) and peflin, and the COPII outer coat subunits Sec31A and Sec13. …

Traditional Ecological Philosophy, Michael J. Desrosier

Graduate Student Theses, Dissertations, & Professional Papers

A collection of creative essays that span a range of topics centered on Indigenous environmental wisdom.

The Effects Of Weather On Facilitating The Intensification And Collapse Of Bark Beetle Outbreaks In Ponderosa Pine Forests Of The Northern Rocky Mountains And The Black Hills, Jordan T. Lestina

Graduate Student Theses, Dissertations, & Professional Papers

Bark beetles are a diverse family of insect herbivores, of which the most aggressive species can cause significant tree mortality, and are integral components of disturbance regimes in conifer dominated forests of North America. Recent drought events across the western U.S. have been broadly associated with the initiation of multiple bark beetle outbreaks in ponderosa pine forests during the last two decades. Changing weather conditions, such as those observed during the onset of drought, affect outbreak progression through their influence on bark beetle physiology and life history traits and the overall vigor and defensiveness of host trees. This study used …

Federal Funding Statutes And State-Federal Wildlife Authority: Did Congress Demonstrate A Preference For State Wildlife Management Authority With Pittman-Robertson And Dingell-Johnson?, James Vaughan Branch

Graduate Student Theses, Dissertations, & Professional Papers

The Federal Aid in Wildlife Restoration Act of 1937 now known as Pittman-Robertson and Federal Aid in Sport Fish Restoration Act of 1950 now known as Dingell-Johnson are federal statutes which stand as the original and perhaps most significant federal funding statutes supporting state wildlife conservation and management. Congress’s decision to pass these statutes may be argued to be a prima facie endorsement of state wildlife agencies (SWA) as the primary managers of wildlife since each statute dedicated substantial federal excise revenue to SWAs. We hypothesized we would find consistent evidence in favor of primary state management authority over wildlife. …

Impacts Of Climate And Wildfire On Western Larch Regeneration, Spencer T. Vieira

Graduate Student Theses, Dissertations, & Professional Papers

Fire plays a critical role in forests of the western United States (US), but as wildfire and climate deviate from historical patterns, increasing fire activity may significantly alter forest ecosystems. To understand the impacts of changing climate and wildfire activity on conifer forests, we studied the impact of wildfire and annual post-fire climate on western larch (Larix occidentalis) regeneration. We destructively sampled 1651 seedlings from 57 sites within 32 fires that burned at moderate or high severity from 2000-2015 in the northwestern US. Using dendrochronological methods, we estimated germination years of seedlings to calculate annual recruitment rates. We …

Genetic And Environmental Contributions To Wolbachia-Induced Cytoplasmic Incompatibility, Kelley Van Vaerenberghe

Graduate Student Theses, Dissertations, & Professional Papers

Maternally-transmitted Wolbachia infect the cells of most insect species, but their frequencies in host populations vary. While much of their success can be attributed to their ability to manipulate host reproduction, these manipulations are context-dependent, varying due to several biotic and abiotic factors. Wolbachia’s most common manipulation, cytoplasmic incompatibility (CI), is a conditional sterility phenotype where male-female host compatibility depends on their infection status. Specifically, CI occurs when infected males produce modified sperm that cause increased embryonic lethality unless the female carries a similar infection. Rescuing their eggs from CI increases the relative fitness of infected females, promoting Wolbachia spread …

Investigating Intellectual Diversity: A Critical Examination Of Academic Publishing Practices And Their Effects On Wildlife Conservation, Madeline M. Damon

Graduate Student Theses, Dissertations, & Professional Papers

Academic publishing processes and standards play a fundamental role in communicating, reviewing, and expanding scientific knowledge in wildlife conservation. However, various publishing biases privilege some research perspectives and worldviews while limiting others. These biases directly impact intellectual diversity, or differences in ontology, axiology, and epistemology. This study aims to quantify intellectual diversity in the field of wildlife conservation and identify how publishing biases affect knowledge available to researchers and decision-makers worldwide.

The study employed a sample of 50,000 articles published between 2018 and 2022, collected from the Web of Science database. To analyze the vast amount of article records, natural …

Seedy Business: Unveiling Fruit-Frugivore Interactions In Loango National Park, Gabon, Diandra Mary Lewis

Graduate Student Theses, Dissertations, & Professional Papers

Fruit-frugivore interactions within forest ecosystems are intricate and are critical determinants of community structure, function, and composition. Increasing anthropogenic impacts on biodiversity in general and forests in particular highlight the need to better understand these plant-animal relationships. This thesis focuses on connections between fruit-bearing plants and the animals that eat their fruits in a relatively undisturbed rainforest in Gabon. The work combines two studies: one scrutinising fruit trait clustering, and the other delving into the difference between using dispersers versus consumers in seed dispersal networks.

In chapter 1, we focused on fruit traits and how they group together in order …

Catch My Drift? Perceptions And Experiences Of Pesticide Contamination Of Organic Crops In Montana, Sarah Rodgers

Graduate Student Theses, Dissertations, & Professional Papers

Pesticide drift and inadvertent contamination pose particular risks to organic production. Some organic producers have lost their crops, certification, and/or organic markets because of contamination events. Through this thesis research, I explain the perceptions and experiences that certified organic farmers in Montana have about drift and inadvertent pesticide contamination. I conducted semi-structured interviews with eleven certified organic farmers from various regions of Montana. Along with one-on-one interviews with organic farmers, interviews with industry and regulatory officials were conducted to better understand the policies and procedures that control what happens when drift occurs at the state level. Industry and regulatory official …

The Effects Of Fatigue On Landing Impact Forces And Postural Steadiness In Collegiate Volleyball Players, Zebadiah P. Boos

Graduate Student Theses, Dissertations, & Professional Papers

Background: The onset of exhaustion can reduce the performance of an athlete and may add to the risk of injury. This establishes the necessity to understand when and how the athlete’s performance is altered as they become fatigued in competition or practice. The aim of this study was to determine the effects of fatigue on dynamic and static tasks in collegiate volleyball athletes by implementing a fatiguing jump protocol. Methods: To replicate an in-game or in-practice situation, five sets of 30 countermovement jumps (CMJ) at 85% maximal height was implemented. Prior to the fatigue protocol, a baseline measure of CMJ …

Looking To The Future Of Wildlife Conservation: Durable Wildlife Policy For The 21st Century, Charlie R. Booher

Graduate Student Theses, Dissertations, & Professional Papers

Wildlife conservation in the United States was built by the dollars of consumptive users. Monies from the sale of hunting licenses, as well as excise taxes on firearms, ammunition, and archery tackle through the Pittman-Robertson Federal Aid in Wildlife Restoration Act (PR), currently fuel a complex system of wildlife conservation via multiple levels of government. However, the number of hunters in this country is rapidly declining, the sale of firearms and ammunition is increasingly unrelated to hunting, and contemporary consumers tend to express different values than traditional hunters. These changes pose significant challenges of relevancy and funding to state and …

Invasive Earthworms In The Crown Of The Continent System And Implications For Land Management, Meghan Elizabeth Scott

Graduate Student Theses, Dissertations, & Professional Papers

The United States contains invasive earthworms originating from Europe and Asia; the majority are European lumbricids. Direct introduction occurs primarily through human activity and, once established, earthworm populations are difficult to address. When exotic earthworms engage in bioturbation, they negatively alter subterranean food webs and nutrient cycling by disrupting soil layering systems. The most prominent form of physical alteration is the change and removal of the topmost organic layer. This disruption is associated with altered nitrogen and carbon cycling, as well as altered forest floor plant communities.

The Crown of the Continent ecosystem is located in southwestern Alberta, southeastern British …

Lidar-Landsat Covariance For Predicting Canopy Fuels, Margaret D. Epstein

Graduate Student Theses, Dissertations, & Professional Papers

Managing wildfires in the western United States is becoming increasingly complex. Visualizing and quantifying canopy structures allows fire managers to both plan for fire and track recovery. Light detecting and ranging, or LiDAR can measure forests in three dimensions, but has limited spatial and temporal coverage. LiDAR-Landsat covariance uses machine learning to fill in the spatial and temporal gaps of LiDAR coverage with supplemental Landsat imagery. However, in order to capture real forest dynamics, a model needs to be stable enough to detect long term trends, sensitive to episodic disturbance, and general enough to work on multiple landcovers. The purpose …