Life Sciences Commons^™

Targeting Macrophytes: Increased Water Quality Through Optimized Vegetation Considerations For Constructed Wetlands, Austin Mcbrady

Masters Theses

---

This study of constructed wetland design investigated relationships between macrophyte species selection and planting density for water quality improvement. A lab-scale wetland was compared against a pilot-scale wetland in San Antonio, Texas at Mitchell Lake to measure differences in effluent water quality improvement using three native macrophyte species. Using a novel, two-phase method, a targeting macrophyte was identified from among other species based on its marked capability for improving water quality factors, then was planted in varied majority densities to compare differences in treatment effectiveness. The results of this study showed that this complimentary approach to wetland design displayed significant …

---

Peer Leader Perspectives From A Pltl Implementation In A Hispanic-Serving Institution, Madhavan Narayanan, Kasey Powers, Dhananjaya Premawardena, Davida S. Smyth, Et Al.

All Faculty Scholarship

---

Peer-Led Team Learning (PLTL) is a pedagogical approach that has been shown to benefit all students, especially underrepresented minority students and peer leaders in Science, Technology, Engineering, and Mathematics (STEM) disciplines. In this work, we present results from our study of the impact of PLTL on our peer leaders from a controlled implementation in general biology, general chemistry, and statistics courses at a Hispanic-serving, minority-serving institution. More specifically, we have measured our PLTL program’s impact on our peer leaders' skill development, engagement with the subject material, and sense of belonging as peer leaders. Weekly peer leader reflections analyzed using the …

---

The Addition Of Sprint Interval Training To Field Lacrosse Training Increases Rate Of Torque Development And Contractile Impulse In Female High School Field Lacrosse Players, T. Brock Symons, Alexandra H. Roberts, Kathleen A. Carter, John F. Caruso

Kinesiology Faculty Publications

---

Field lacrosse requires sudden directional changes and rapid acceleration/deceleration. The capacity to perform these skills is dependent on explosive muscle force production. Limited research exists on the potential of sprint interval training (SIT) to impact explosive muscle force production in field lacrosse players. The purpose of this study is to examine SIT, concurrent to field-lacrosse-specific training, on the rate of torque development (RTD), contractile impulse, and muscle function in female high school field lacrosse players (n = 12; 16 ± 1 yrs.). SIT was performed three times per week, concurrent to field-lacrosse-specific training, for 12 weeks. Right lower-limb muscle performance …

---

Playful Mouth-To-Mouth Interactions Of Belugas (Delphinapterus Leucas) In Managed Care, Jackson R. Ham, Malin K. Lilley, Riley J. Winchenski, Jesus Miranda, Ángel G. Velarde Dediós, Katie Kolodziej, Sergio M. Pellis, Heather M. Manitzas Hill

All Faculty Scholarship

---

Belugas (Delphinapterus leucas) engage in many forms of play (e.g., object, water, locomotor), but no play is quite as curious as the unusual form of cooperative social play involving mouth-to-mouth interactions. These playful interactions are characterized by two belugas approaching each other head-to-head and interlocking their jaws, clasping one another, as if they were shaking hands. Observed in belugas both in the wild and in managed care, it is seemingly an important type of social play that offers a unique way of socializing with conspecifics. To describe this unusual behavior, a group of belugas in managed care was …

---

Promoting Rapid Vaccine Science Education At The Onset Of The Covid-19 Pandemic, Davida S. Smyth, Trace Jordan, Robert Seiser, Et Al.

All Faculty Scholarship

---

At the onset of the 2019 coronavirus disease (COVID-19) pandemic, it was clear that we needed to support public education on the science of vaccines. This project was born of that need and led to the development of comprehensive educational materials that addressed the process of science, severe acute respiratory syndrome coronavirus 2 biology, vaccine development, and science communication and outreach. Called the “Online Vaccine Science Resources for COVID-19 Education,” the materials generated were designed to be implemented by educators and community groups in various contexts. They took the form of four modules and general audience informational videos available on …

---

The Effects Of Urban Landscape, Soundscape, And Light Pollution On Avian Diversity And Nesting In South San Antonio, Texas, Alfredo Llamas

Masters Theses

---

As critical habitat continues to dwindle due to the expansion of urbanization, alternative habitat in urban ecosystems becomes a necessary natural resource for the survival of birds. In the last decade, local San Antonio environmental authorities have focused their efforts on restoring the San Antonio Mission Reach. Ecological revitalization of the San Antonio Mission Reach could increase avian, and flora biodiversity with ongoing restoration, yet how birds use restored habitat has not been assessed. Additionally, south of the Reach, two more peri-urban sites have great potential to be high quality habitat for birds but have not been surveyed for nesting …

---

The Effects Of Anthropogenic Sensory Pollution On Arthropod Diversity And Pollinator Behavior, Sierra Dee Rodriguez, Jennifer N. Phillips Phd

Masters Theses

---

Pollinators provide a key ecological function in terrestrial ecosystems, yet in recent years, they have encountered unprecedented declines, likely due to anthropogenic change. Light and noise pollution, which can interfere with the visual and auditory systems of animals that regulate daily behaviors, are important factors to consider when communities are encroached by human development. While many researchers have looked at how vertebrate species behaviorally react to human caused habitat degradation and sensory pollution, little is known about how invertebrates, including arthropod pollinators, are affected, and whether there is a negative cascading effect on the plants that they pollinate. This research …

---

Wastewater Surveillance Of Sars-Cov-2 Genomic Populations On A Country-Wide Scale Through Targeted Sequencing, Florencia Cancela, Natalia Ramos, Davida S. Smyth, Et Al.

All Faculty Scholarship

---

SARS-CoV-2 surveillance of viral populations in wastewater samples is recognized as a useful tool for monitoring epidemic waves and boosting health preparedness. Next generation sequencing of viral RNA isolated from wastewater is a convenient and cost-effective strategy to understand the molecular epidemiology of SARS-CoV-2 and provide insights on the population dynamics of viral variants at the community level. However, in low- and middle-income countries, isolated groups have performed wastewater monitoring and data has not been extensively shared in the scientific community. Here we report the results of monitoring the co-circulation and abundance of variants of concern (VOCs) of SARS-CoV-2 in …

---

Editorial: Community Series In Tools, Techniques, And Strategies For Teaching In A Real-World Context With Microbiology, Volume Ii, Davida S. Smyth, Nicole A. Broderick, Carlos C. Goller

All Faculty Scholarship

---

This Research Topic is the second volume in the Community Series Tools, Techniques, and Strategies for Teaching in a Real-World Context with Microbiology. Making microbiology relevant to our students increases student engagement with science, which could not be more important as we emerge from the COVID-19 pandemic. We have learned much during this period as we adapted and modified our learning environments and strategies, all while demonstrating the many ways microbes impact our world beyond disease. Placing microbes at center stage leads to engaging and exciting curricula and assignments. Microbes also are wonderful tools as they are easy to manipulate …

---

How Getting Friendly With Bacteria Can Promote Student Appreciation Of Microbial Diversity And Their Civic Scientific Literacy, Davida S. Smyth, Simon Chen, Gina Sompanya, Molly Metz, Theresa Conefrey

Biology Faculty Publications

---

ePortfolios are digital repositories where students can curate papers, projects, and reflections from individual or multiple courses across the disciplines and in a variety of formats to showcase their learning. This transparent and portable medium, which enables students to document their knowledge and abilities for assessment and career development, has been recognized by the American Association of Colleges and Universities as one of 11 high-impact practices. Using tailored rubrics, student assessment of learning gain surveys, and end-of-course exam questions, this study demonstrates how an ePortfolio assignment can be used in microbiology courses taken by majors and nonmajors to measure student …

---

Humidity Reduces Rapid And Distant Airborne Dispersal Of Viable Viral Particles In Classroom Settings, Antun Skanata, Fabrizio Spagnolo, Molly Metz, Davida S. Smyth, John J. Dennehy

Biology Faculty Publications

---

The transmission of airborne pathogens is considered to be the main route through which a number of known and emerging respiratory diseases infect their hosts. While physical distancing and mask wearing may help mitigate short-range transmission, the extent of long-range transmission in closed spaces where a pathogen remains suspended in the air remains unknown. We have developed a method to detect viable virus particles by using an aerosolized bacteriophage Phi6 in combination with its host Pseudomonas phaseolicola, which when seeded on agar plates acts as a virus detector that can be placed at a range of distances away from …

---

Species Diversity And Barcoding Of Macroinvertebrates From The San Antonio River, Gabrielle Silva

Student Research Symposium 2022

---

Macroinvertebrates are important biological indicators of health and ecological change within aquatic ecosystems. Macroinvertebrate diversity of the San Antonio (SA) River Watershed (Texas), which traverses rural and urban regions (Bexar County, TX), remains understudied compared to vertebrate counterparts of economic and conservation importance. The SA River hosts a diversity of crustaceans (crayfish), insects (beetles, dragonflies), annelids (leeches), and unidentified larvae at intermediate developmental stages. To improve ecological records of the SA River, an integrative approach is used to establish a reference macroinvertebrate species inventory and a genetic barcoding database (mitochondrial COI and/or 16S rRNA) for the SA River Mission Reach …

---

Monitoring Sars-Cov-2 In Wastewater During New York City's Second Wave Of Covid-19: Sewershed-Level Trends And Relationships To Publicly Available Clinical Testing Data, Catherine Hoar, Francoise Chauvin, Alexander Clare, Hope Mcgibbon, Esmeraldo Castro, Davida S. Smyth, Et Al.

Biology Faculty Publications

---

New York City's wastewater monitoring program tracked trends in sewershed-level SARS-CoV-2 loads starting in the fall of 2020, just before the start of the city's second wave of the COVID-19 outbreak. During a five-month study period, from November 8, 2020 to April 11, 2021, viral loads in influent wastewater from each of New York City's 14 wastewater treatment plants were measured and compared to new laboratory-confirmed COVID-19 cases for the populations in each corresponding sewershed, estimated from publicly available clinical testing data. We found significant positive correlations between viral loads in wastewater and new COVID-19 cases. The strength of the …

---

Tracking Cryptic Sars-Cov-2 Lineages Detected In Nyc Wastewater, Davida S. Smyth, Monica Trujillo, Devon A. Gregory, Marc C. Johnson, John J. Dennehy, Et Al.

Biology Faculty Publications

---

Tracking SARS-CoV-2 genetic diversity is strongly indicated because diversifying selection may lead to the emergence of novel variants resistant to naturally acquired or vaccine-induced immunity. To monitor New York City (NYC) for the presence of novel variants, we deep sequence most of the receptor binding domain coding sequence of the S protein of SARS-CoV-2 isolated from the New York City wastewater. Here we report detecting increasing frequencies of novel cryptic SARS-CoV-2 lineages not recognized in GISAID’s EpiCoV database. These lineages contain mutations that had been rarely observed in clinical samples, including Q493K, Q498Y, E484A, and T572N and share many mutations …

---

Early Evidence Of The Sars-Cov-2 B.1.1.529 (Omicron) Variant In Community Wastewater: United States, November–December 2021, Amy Kirby, Rory M. Welsh, Zachary Marsh, Davida S. Smyth, Et Al.

Biology Faculty Publications

---

Notes from the Field: Early Evidence of the SARS-CoV-2 B.1.1.529 (Omicron) Variant in Community Wastewater — United States, November–December 2021

Covers: California, Colorado, New York City, Houston

---

Exercise Training Attenuates Ovariectomy-Induced Alterations In Skeletal Muscle Remodeling, Apoptotic Signaling, And Atrophy Signaling In Rat Skeletal Muscle, Eun-Jeong Cho, Youngju Choi, Jiyeon Kim, Jun Hyun Bae, Jinkyung Cho, Dong-Ho Park, Ju-Hee Kang, Jin Hwan Yoon, Eunmi Park, Dae Yun Seo, Sukho Lee, Hyo-Bum Kwak

Kinesiology Faculty Publications

---

Purpose

The effects of aerobic exercise training on soleus muscle morphology, mitochondria-mediated apoptotic signaling, and atrophy/hypertrophy signaling in ovariectomized rat skeletal muscle were investigated.

Methods

Female Sprague-Dawley rats were divided into control (CON), ovariectomy (OVX), and ovariectomy plus exercise (OVX+EX) groups. After ovarian excision, exercise training was performed using a rat treadmill at 20 m/min, 50 min/day, 5 days/week for 12 weeks. Protein levels of mitochondria-mediated apoptotic signaling and atrophy/hypertrophy signaling in the skeletal muscle (soleus) were examined through western immunoblot analysis.

Results

The number of myocytes and myocyte cross-sectional area (CSA) were increased and the extramyocyte space was decreased …

---

Effects Of Brief Dry Cupping On Muscle Soreness In The Gastrocnemius Muscle And Flexibility Of The Ankle, John Smith, Amy Morrison, Myra Villarreal

Kinesiology Faculty Publications

---

OBJECTIVES

The purpose of this study was to analyze the effects of brief dry cupping on muscle soreness of the gastrocnemius muscle and range of motion (ROM) in the ankle.

METHODS

Thirty-six participants (age=29±10 yrs, ht=173.8±10.3 cm, wt=75.3±15.9 kg) were randomly assigned to three groups: A (no exercise), B (bilateral heel drops to exhaustion), and C (right unilateral heel drops to exhaustion). Dorsiflexion ROM was assessed bilaterally for all groups. All participants received the cupping protocol on the right gastrocnemius, but C also received it on the left. Dry cupping was applied using four two-inch cups in four quadrants on …

---

Correlates Of Balance And Aerobic Indices In Lower-Limb Prostheses Users On Arm Crank Exercise, Gary Guerra, John Smith

Kinesiology Faculty Publications

---

Background: The HUMAC Balance System (HBS) offers valid measurement of balance, and the arm crank exercise test (ACE) is a valid measure of physiological capacity. Neither have been used to evaluate associations between balance and physiological capacity in lower-limb amputees. Methods: Thirty-five participants with lower-limb amputations were recruited. Standing balance (center of pressure) was evaluated during eyes opened (EO) and eyes closed (EC) conditions using the HBS. Participants performed ACE graded exercise testing (GXT) to evaluate aerobic capacity. Spearman’s rho was used to identify relationships between variables. Cut-points for three groups were generated for time on ACE. Mann–Whitney U tests …

---

The Effects Of Low Volume Versus High Volume Sled-Push Training On Muscular Adaptation, Jeffrey R. Bernard, Yi-Hung Liao, Christian O. Madrigal, Joshua D. Levesque, Matthew B. Fraze, Isaac Del Torro, Sukho Lee

Kinesiology Faculty Publications

---

PURPOSE

This study aimed to compare the effects of low-volume and high-volume sled-push resistance training on muscle strength, power, and body composition.

METHODS

Twenty-four college students were recruited and matched based on baseline one-repetition maximum (1-RM) into one of the three groups: 1) low volume (LV) resistance training, 2) high volume (HV) resistance training, or 3) control (CON) (n=8 per group). The LV training consisted of five single repetitions of pushing a weighted sled for 9.1 m. The HV training consisted of three sets of five repetitions of pushing a weighted sled for 9.1 m. Training consisted of three weekly …

---

Quantifying Step Count And Oxygen Consumption With Portable Technology During The 2-Min Walk Test In People With Lower Limb Amputation, John Smith, Gary Guerra

Kinesiology Faculty Publications

---

Step counts and oxygen consumption have yet to be reported during the 2-min walk test (2MWT) test in persons with lower-limb amputations (LLA). The purpose of this study was to determine step counts and oxygen consumption during the 2MWT in LLA. Thirty-five men and women walked for two minutes as quickly as possible while wearing activity monitors (ActiGraph Link on the wrist (LW) and ankle (LA), Garmin vivofit3 on the wrist (VW) and ankle (VA), and a modus StepWatch on the ankle (SA), and a portable oxygen analyzer. The StepWatch on the ankle (SA) and the vivofit3 on the wrist …

---

Effect Of Treadmill Exercise And Probiotic Ingestion On Motor Coordination And Brain Activity In Adolescent Mice, Junechul Kim, Bo-Eun Yoon

Kinesiology Faculty Publications

---

High-intensity exercise can lead to chronic fatigue, which reduces athletic performance. On the contrary, probiotic supplements have many health benefits, including improvement of gastrointestinal health and immunoregulation. However, the effects of probiotics combined with exercise interventions on motor functions and brain activity have not been fully explored. Therefore, this study aimed to identify the effects of probiotic supplements and aerobic exercise on motor function, immune response, and exercise intensity and probiotic ingestion. After four weeks of intervention, the motor functions were assessed by rotarod test, then the levels of cytokines, gamma-aminobutyric acid (GABA), and glutamate were detected. The improvement caused …

---

Effects Of A Four-Week Core Stability Exercise On Functional Movement And Balance In People With Mild Lower-Limb Discomfort, Jiyeon Kim, Joungbo Ko, Jongil Lim, Hyejung Choi, Kyoungho Seo, Sukho Lee

Kinesiology Faculty Publications

---

This study aimed to investigate the effects of a short-term core stability exercise on functional movement and balance in people with mild lower-limb discomfort. Twenty people with mild lower-limb discomfort were randomly assigned to control (CG) and core stability exercise training groups (SG, n=10 each). The SG completed twenty 30-min training sessions consisting of Pilates exercises for four weeks. Functional movement, balance, and discomfort level were assessed before and after core stability exercise, using a functional movement test, balance test and visual analogue scale (VAS), respectively. A mixed ANOVA with repeated measures was performed to determine the differences. SG demonstrated …

---

Locomotor Coordination, Visual Perception And Head Stability During Running, Joseph Hamill, Jongil Lim, Richard Van Emmerik

Kinesiology Faculty Publications

---

Perception and action are coupled such that information from the perceptual system is related to the dynamics of action in order to regulate behavior adaptively. Using running as a model of a cyclic behavior, this coupling involves a continuous, cyclic relationship between the runner’s perception of the environment and the necessary adjustments of the body that ultimately result in a stable pattern of behavior. The purpose of this paper is to illustrate how individuals relate visual perception to rhythmic locomotor coordination patterns in conditions during which foot–ground collisions and visual task demands are altered. We review the findings of studies …

---

Maternal Weight Affects Placental Dna Methylation Of Genes Involved In Metabolic Pathways In The Common Marmoset Monkey (Callithrix Jacchus), Laren Narapareddy, Derek E. Wildman, Don L. Armstrong, Amy Weckle, Aleeca F. Bell, Crystal L. Patil, Suzette D. Tardif, Corinna N. Ross, Julienne N. Rutherford

Biology Faculty Publications

---

Accumulating evidence suggests that dysregulation of placental DNA methylation (DNAm) is a mechanism linking maternal weight during pregnancy to metabolic programming outcomes. The common marmoset, Callithrix jaccus, is a platyrrhine primate species that has provided much insight into studies of the primate placenta, maternal condition, and metabolic programming, yet the relationships between maternal weight and placental DNAm are unknown. Here, we report genome-wide DNAm from term marmoset placentas using reduced representation bisulfite sequencing. We identified 74 genes whose DNAm pattern is associated with maternal weight during gestation. These genes are predominantly involved in energy metabolism and homeostasis, including the regulation …

---

Vector Mosquito Surveillance Using Centers For Disease Control And Prevention Autocidal Gravid Ovitraps In San Antonio, Texas, Joel A. Obregón, Michelle A. Ximenez, Estefany E. Villalobos, Megan R. Wise De Valdez

Biology Faculty Publications

---

Mosquito surveillance in large urban areas of the southern USA that border Mexico has become increasingly important due to recent transmission of Zika virus and chikungunya virus in the Americas as well as the continued threat of dengue and West Nile viruses. The vectors of these viruses, Aedes aegypti, Ae. albopictus, and Culex quinquefasciatus, co-occur in residential areas, requiring vector control entities to deploy several different trap types, often expensive and labor-intensive, to surveil these ecologically different species. We evaluated the use of a single trap type, the US Centers for Disease Control and Prevention autocidal gravid …

---

Diet, Digestion And Energy Intake In Captive Common Marmosets (Callithrix Jacchus): Research And Management Implications, Michael L. Power, Jessica Adams, Kirsten Solonika, Ricki J. Colman, Corinna N. Ross, Suzette D. Tardif

Biology Faculty Publications

---

Common marmosets (Callithrix jacchus) are susceptible to intestinal inflammation which leads to chronic diarrhea, weight loss, and vitamin D deficiency. We examined food intake and digestion in three mixed-sex groups of adult marmosets maintained on three commercial base diets. Animals underwent two consecutive 4-day digestion trials. Body mass stayed constant. Feces and diet were assayed for Mn, fat, and gross energy (GE). Apparent digestibility of dry matter (ADDM) was calculated by the total collection method and from dietary and fecal Mn; the methods produced correlated results (r = 0.658, p < 0.001). Apparent digestibility of energy (ADE) was calculated from ADDM and the GE of feces and diet; apparent digestibility of fat (ADfat) was calculated from ADDM and fecal fat. ADDM and ADE varied by diet (p < 0.001). We found poor digesters on all three diets. The concentration of fecal fat was inversely related to ADE (r = −0.729, p < 0.001). High fecal fat (>10%) was associated with ADfat of zero, consistent …

---

Adaptation Of A Microbial Detection Array As A Monitoring Tool Revealed The Presence 2 Of Mosquito-Borne Viruses And Insect-Specific Viruses In Field-Collected Mosquitoes, Estelle Martin, Monica K. Boruck, James Thissen, Selene Garcia -Luna, Mona Hwang, Megan R. Wise De Valdez, Crystal J. Jaing, Gabriel L. Hamer, Matthias Frank

Biology Faculty Publications

---

Several mosquito-borne diseases affecting humans are emerging or re-emerging in the United States. The early detection of pathogens in mosquito populations is essential to prevent and control the spread of these diseases. In this study, we tested the potential applicability of the Lawrence Livermore Microbial Detection Array (LLMDA) to enhance bio-surveillance by detecting microbes present in Aedes aegypti, Aedes albopictus and Culex mosquitoes that are major vector species globally, including in Texas. The sensitivity and reproducibility of the LLMDA was tested in mosquito samples spiked with different concentrations of dengue virus (DENV) revealing a detection limit of >100 but <1000 pfu/mL. Additionally, field-collected mosquitoes from Chicago, Illinois and College Station, Texas of known infection status (West Nile virus (WNV) and Culex flavivirus (CxFLAV) positive) were tested on the LLMDA to confirm its efficiency. Mosquito field samples of unknown infection status, collected in San Antonio, TX and the Lower Rio Grande Valley (LRGV), TX were run on the LLMDA and further confirmed by PCR or qPCR. The analysis of the field samples with the LLMDA revealed the presence of cell fusing agent virus (CFAV) in Ae. …

---

Go to article