Life Sciences Commons^™

Nutrient Limitation In Three Lowland Tropical Forests In Southern China Receiving High Nitrogen Deposition: Insights From Fine Root Responses To Nutrient Additions, Feifei Zhu, Muneoki Yoh, Frank S. Gilliam, Xiankai Lu, Jiangming Mo

Biological Sciences Faculty Research

Elevated nitrogen (N) deposition to tropical forests may accelerate ecosystem phosphorus (P) limitation. This study examined responses of fine root biomass, nutrient concentrations, and acid phosphatase activity (APA) of bulk soil to five years of N and P additions in one old-growth and two younger lowland tropical forests in southern China. The old-growth forest had higher N capital than the two younger forests from long-term N accumulation. From February 2007 to July 2012, four experimental treatments were established at the following levels: Control, N-addition (150 kg N ha^–1 yr^–1), P-addition (150 kg P ha^–1 yr^{–1 …}

A New Species Of Euscorpius From Tinos Island, Greece (Scorpiones: Euscorpiidae), Victor Fet, Michael E. Soleglad, Aristeidis Parmakelis, Panayiota Kotsakiozi, Iasmi Stathi

Biological Sciences Faculty Research

The scorpion genus Euscorpius has been insufficiently studied on the Aegean Islands of Greece. We describe a new species from the Western Cyclades, E. kritscheri sp. n., from Tinos Island. The species-level status of this form is confirmed by a phylogenetic study based on multiple DNA markers. In addition, a population from nearby Andros Island is characterized as E. cf. kritscheri, which could be potentially a separate species.

Changes In Soil Carbon Sequestration In Pinus Massoniana Forests Along An Urban-To-Rural Gradient Of Southern China, H. Chen, W. Zhang, Frank S. Gilliam, L. Liu, J. Huang, T. Zhang, W. Wang, J. Mo

Biological Sciences Faculty Research

Urbanization is accelerating globally, causing a variety of environmental changes such as increases in air temperature, precipitation, atmospheric CO₂, and nitrogen (N) deposition. However, the effects of these changes on forest soil carbon (C) sequestration remain largely unclear. Here, we used urban-to-rural environmental gradients in Guangdong Province, southern China, to address the potential effects of these environmental changes on soil C sequestration in Pinus massoniana forests. In contrast to our expectations and earlier observations, soil C content in urban sites was significantly lower than that in suburban and rural sites. Lower soil C pools in urban sites were …

Involvement Of Reactive Oxygen Species In A Feed-Forward Mechanism Of Na/K-Atpase Mediated Signaling, Yanling Yan, Anna P. Shapiro, Steven Haller, Vinal Katragadda, Lijun Liu, Jiang Tian, Venkatesha Basrur, Deepak Malhotra, Zi-Jian Xie, Nader G. Abraham, Joseph I. Shapiro Md, Jiang Liu

Biochemistry and Microbiology

Cardiotonic steroids (such as ouabain) signaling through Na/K-ATPase regulate sodium reabsorption in the renal proximal tubule. We report here that reactive oxygen species are required to initiate ouabain-stimulated Na/K-ATPase·c-Src signaling. Pretreatment with the antioxidant N-acetyl-L-cysteine prevented ouabain-stimulated Na/K-ATPase·c-Src signaling, protein carbonylation, redistribution of Na/K-ATPase and sodium/proton exchanger isoform 3, and inhibition of active transepithelial ²²Na⁺ transport. Disruption of the Na/K-ATPase·c-Src signaling complex attenuated ouabain-stimulated protein carbonylation. Ouabain-stimulated protein carbonylation is reversed after removal of ouabain, and this reversibility is largely independent of de novo protein synthesis and degradation by either the lysosome or the proteasome pathways. Furthermore, …

Microclimate Moderates Plant Responses To Macroclimate Warming, Pieter De Frenne, Francisco Rodríguez-Sánchez, David Anthony Coomes, Lander Baeten, Gorik Verstraeten, Mark Vellend, Markus Bernhardt-Römermann, Carissa D. Brownd, Jörg Brunet, Johnny Cornelis, Guillaume M. Decocq, Hartmut Dierschke, Ove Eriksson, Frank S. Gilliam, Radim Hédl, Thilo Heinken, Martin Hermy, Patrick Hommel, Michael A. Jenkins, Daniel L. Kelly, Keith J. Kirby, Fraser J. G. Mitchell, Tobias Naaf, Miles Newman, George Peterken, Petr Petrík, Jan Schultz, Grégory Sonnier, Hans Van Calster, Donald M. Waller, Gian-Reto Walther, Peter S. White, Kerry D. Woods, Monika Wulf, Bente Jessen Graae, Kris Verheyen

Biological Sciences Faculty Research

Recent global warming is acting across marine, freshwater, and terrestrial ecosystems to favor species adapted to warmer conditions and/or reduce the abundance of cold-adapted organisms (i.e., “thermophilization” of communities). Lack of community responses to increased temperature, however, has also been reported for several taxa and regions, suggesting that “climatic lags” may be frequent. Here we show that microclimatic effects brought about by forest canopy closure can buffer biotic responses to macroclimate warming, thus explaining an apparent climatic lag. Using data from 1,409 vegetation plots in European and North American temperate forests, each surveyed at least twice over an interval of …

Draft Genome Sequence Of A Stable Mucoid Strain Of Pseudomonas Aeruginosa Pao581 With A Muca25 Mutation, Yeshi Yin, T. Ryan Withers, John R. W. Govan, Shannon L. Johnson, Hongwei D. Yu

Biochemistry and Microbiology

A mutation in the mucA gene, which encodes a negative regulator of alginate production in Pseudomonas aeruginosa, is the main mechanism underlying the conversion to mucoidy in clinical isolates from patients with cystic fibrosis (CF). Here, we announce the draft genome sequence of the stable alginate-overproducing mucoid strain P. aeruginosa PAO581 with a mucA25 mutation, a derivative from the nonmucoid strains P. aeruginosa PAO381 and PAO1.

Draft Genome Sequence Of A Mucoid Isolate Of Pseudomonas Aeruginosa Strain C7447m From A Patient With Cystic Fibrosis, Yeshi Yin, T. Ryan Withers, Shannon L. Johnson, Hongwei D. Yu

Biochemistry and Microbiology

Alginate overproduction by Pseudomonas aeruginosa, or mucoidy, plays an important role in the pathogenesis of chronic lung infections in cystic fibrosis (CF) patients. Here we report the draft genome sequence of a clinical isolate of mucoid P. aeruginosa strain C7447m from a CF patient with chronic lung infection.

Evidence For Sigma Factor Competition In The Regulation Of Alginate Production By Pseudomonas Aeruginosa, Yeshi Yin, T. Ryan Withers, Xin Wang, Hongwei D. Yu

Biochemistry and Microbiology

Alginate overproduction, or mucoidy, plays an important role in the pathogenesis of P. aeruginosa lung infection in cystic fibrosis (CF). Mucoid strains with mucA mutations predominantly populate in chronically-infected patients. However, the mucoid strains can revert to nonmucoidy in vitro through suppressor mutations. We screened a mariner transposon library using CF149, a non-mucoid clinical isolate with a misssense mutation in algU(AlgU^A61V). The wild type AlgU is a stress-related sigma factor that activates transcription of alginate biosynthesis. Three mucoid mutants were identified with transposon insertions that caused 1) an overexpression of AlgU^A61V, 2) an overexpression of …

Long-Term Nitrogen Addition Decreases Carbon Leaching In A Nitrogen-Rich Forest Ecosystem, X. Lu, Frank S. Gilliam, G. Yu, H. Chen, J. Mo

Biological Sciences Faculty Research

Dissolved organic carbon (DOC) plays a critical role in the carbon (C) cycle of forest soils, and has been recently connected with global increases in nitrogen (N) deposition. Most studies on effects of elevated N deposition on DOC have been carried out in N-limited temperate regions, with far fewer data available from N-rich ecosystems, especially in the context of chronically elevated N deposition. Furthermore, mechanisms for excess N-induced changes of DOC dynamics have been suggested to be different between the two kinds of ecosystems, because of the different ecosystem N status. The purpose of this study was to experimentally examine …

Truncation Of Type Iv Pilin Induces Mucoidy In Pseudomonas Aeruginosa Strain Pao579, T. Ryan Withers, F. Heath Damron, Yeshi Yin, Hongwei D. Yu

Biochemistry and Microbiology

Pseudomonas aeruginosa is a Gram negative, opportunistic pathogen that uses the overproduction of alginate, a surface polysaccharide, to form biofilms in vivo. Overproduction of alginate, also known as mucoidy, affords the bacterium protection from the host's defenses and facilitates the establishment of chronic lung infections in individuals with cystic fibrosis. Expression of the alginate biosynthetic operon is primarily controlled by the alternative sigma factor AlgU (AlgT/σ²²). In a nonmucoid strain, AlgU is sequestered by the transmembrane antisigma factor MucA to the cytoplasmic membrane. AlgU can be released from MucA via regulated intramembrane proteolysis by proteases AlgW and MucP …

Using Student-Produced Time-Lapse Plant Movies To Communicate Concepts In Plant Biology, Marcia Harrison-Pitaniello Phd

Biological Sciences Faculty Research

Why do students think plants are “boring”? One factor may be that they do not see plant movement in real (i.e., their) time. This attitude may negatively impact their understanding of plant biology. Time-lapse movies of plants allow students to see the sophistication of movements involved in both organ development and orientation.

The objective of this project was to develop simple methods to capture image sequences for lab analysis and for converting to movies. The technology for making time-lapse movies is now easily attainable and fairly inexpensive, allowing its use for skill levels from grade school through college undergraduates. In …

Etudes On Iurids, Vi. Further Revision Of Calchas Birula, 1899 (Scorpiones: Iuridae), With A Description Of A New Genus And Two New Species., Ersen Aydın Yağmur, Michael E. Soleglad, Victor Fet, František Kovařík

Euscorpius

Several new Calchas populations are studied from Turkey, including specimens from Hakkari Province, which borders the northern edge of Iraq. A new genus, Neocalchas, gen. nov., and two new species, Calchas anlasi, sp. nov. and C. kosswigi, sp. nov., are described. The two genera, Calchas and Neocalchas, are diagnosed by their hemispermatophore structure, chelal finger dentition, telson morphometrics and setation, and trichobothrial topology of the pedipalp chela. Genus Calchas Birula, 1899 includes four species: C. anlasi, sp. nov., C. birulai, C. kosswigi, sp. nov., and C. nordmanni; genus …

Interactive Effects Of Nitrogen And Phosphorus On Soil Microbial Communities In A Tropical Forest, Lei Liu, Tao Zhang, Frank S. Gilliam, Per Gundersen, Wei Zhang, Hao Chen, Jiangming Mo

Biological Sciences Faculty Research

Elevated nitrogen (N) deposition in humid tropical regions may exacerbate phosphorus (P) deficiency in forests on highly weathered soils. However, it is not clear how P availability affects soil microbes and soil carbon (C), or how P processes interact with N deposition in tropical forests. We examined the effects of N and P additions on soil microbes and soil C pools in a N-saturated old-growth tropical forest in southern China to test the hypotheses that (1) N and P addition will have opposing effects on soil microbial biomass and activity, (2) N and P addition will alter the composition of …

The First Molecular Phylogeny Of Buthidae (Scorpiones), Victor Fet, Benjamin Gantenbein, Alexander Gromov, Graeme Lowe, Wilson R. Lourenço

Euscorpius

The first partial phylogeny of family Buthidae (17 genera) is presented, based on molecular data (16S rRNA mitochondrial DNA). The strong support for a monophyletic Old World group of 13 genera (mainly Palearctic desert forms) is demonstrated, while representative genera from Madagascar (Grosphus) and Southeast Asia (Lychas) group outside, as well as New World genera Centruroides and Rhopalurus. A very strong support is observed for the first time for three groups of Old World genera: (a) Compsobuthus, Mesobuthus, Liobuthus, Kraepelinia; (b) Hottentotta, Buthacus; (c) Orthochirus, Anomalobuthus. Phylogenetic …

Morphology Analysis Supports Presence Of More Than One Species In The “Euscorpius Carpathicus” Complex (Scorpiones: Euscorpiidae), Victor Fet, Michael E. Soleglad

Euscorpius

We investigate a number of scorpion populations from southern and central Europe, commonly classified under a “catch-all” name of Euscorpius carpathicus (L., 1767). This species includes a high number of described subspecies but its composition is not resolved. The detailed morphology analysis in the present paper includes a number of new characters, in particular individually mapped external patellar accessory trichobothria. It suggests that several clearly separated lineages are present. E. carpathicus (L.) is restricted here to geographically marginal populations from Romania (terra typica), which exhibit loss of one trichobothrium in the patellar series em (= 3). Another lineage (Austria, Croatia, …

Two New Andean Species Of Brachistosternus Pocock (Scorpiones: Bothriuridae), Jose A. Ochoa, Louis E. Acosta

Euscorpius

Two new Andean species of the genus Brachistosternus Pocock from southern Peru and northern Chile are described: B. titicaca sp. n. from the Titicaca basin (Departamento Puno, Peru), at 3850-3900 m, and B. quiscapata sp. n. from Departamento Tacna (Peru) and Provincia Arica (Chile), at 3100-3400 m. Both species belong to the subgenus Brachistosternus (Leptosternus) Maury. They are related to the Argentinean species B. (L.) intermedius Lönnberg and B.(L.) montanus Roig Alsina. Comparisons between these four species are provided, including a combination of characters: length/width ratio of metasomal segment V, number of setae of metasomal segment V and tarsus III, …

Etudes On Iurids, V. Further Revision Of Iurus Thorell, 1876 (Scorpiones: Iuridae), With A Description Of A New Genus And Two New Species, Michael E. Soleglad, Victor Fet, František Kovařík, Ersen Aydın Yağmur

Euscorpius

Iurus populations from the Aegean area are studied, including the Greek islands of Crete, Karpathos, Kythira, Rhodes, and Samos. A new genus, Protoiurus gen. nov., and two new species, Protoiurus rhodiensis sp. nov. and P. stathiae sp. nov., are described. The two genera, Iurus and Protoiurus, are diagnosed by their hemispermatophore structure; a cladistic analysis based on this structure is presented. Genus Iurus Thorell, 1876 includes three species: I. dekanum, I. dufoureius, and I. kinzelbachi; genus Protoiurus includes five species: P. asiaticus comb. nov., P. kadleci comb. nov., P. kraepelini comb. nov., P. rhodiensis sp. nov., and P. …

Euscorpiops Neradi Sp. N. From Thailand (Scorpiones: Euscorpiidae: Scorpiopinae), František Kovařík, Jana Plíšková, František Šťáhlavský

Euscorpius

Euscorpiops neradi sp. n. from Thailand is described and compared with other species of the genus Euscorpiops Vachon, 1980. It is the smallest species of the genus, with total length about 25 mm in both sexes. In E. neradi sp. n. external trichobothria on the patella number 16 (5 eb, 2 esb, 2 em, 3 est, 4 et) and ventral trichobothria on the patella number 6. Pedipalp fingers are flexed in males and straight in females.

Alloscorpiops Citadelle Sp. N. From Thailand (Scorpiones: Euscorpiidae: Scorpiopinae)., František Kovařík

Euscorpius

Alloscorpiops citadelle sp. n. from Thailand is described and compared with A. anthracinus (Simon, 1887). A. citadelle sp. n. is characterized mainly by a higher number of trichobothria on the patella, which has 29–34 external (23–24 in A. anthracinus) and 19–21 ventral (15–19 in A. anthracinus) trichobothria.

Evolution Of Scorpion Orthobothriotaxy: A Cladistic Approach, Michael E. Soleglad, Victor Fet

Euscorpius

This study presents a cladistic analysis of the derivation of orthobothriotaxic patterns in scorpions. Included in this analysis are the original three orthobothriotaxic patterns defined by Vachon (1972, 1974), the pattern of the unique scorpion Pseudochactas ovchinnikovi Gromov, 1998, and two trichobothrial patterns of fossil scorpions, the Upper Carboniferous palaeopisthacanthids and the Lower Cretaceous archaeobuthids. An overview of all fossil scorpion material where trichobothria are reported is presented in detail. The approach used in this analysis is to model the existence of an individual trichobothrium, adopting the ‘absence of’, ‘petite size’ and ‘full size’ as incremental stages of a trichobothrium’s …

Contributions To Scorpion Systematics. I. On Recent Changes In High-Level Taxonomy, Victor Fet, Michael E. Soleglad

Euscorpius

Prendini & Wheeler (2005) criticized the methods of phylogenetic analyses by Soleglad, Fet, and their coauthors, and executed an unprecedented taxonomic action: without analyzing any of these taxa, they performed a wholesale synonymization of four parvorders, eight superfamilies, one family, 11 subfamilies, eight tribes, two subtribes, and three genera (in total, 37 taxa) of scorpions, and made other taxonomic changes. No alternative new classification has been proposed (instead, they revert to a previous classification), and no results of original work on this subject by Prendini & Wheeler (2005) have been presented. Here, we reverse all taxonomic changes performed by Prendini …

Etudes On Iurids, Ii. Revision Of Genus Calchas Birula, 1899, With The Description Of Two New Species (Scorpiones: Iuridae), Victor Fet, Michael E. Soleglad, František Kovařík

Euscorpius

The relict, phylogenetically important scorpion genus Calchas Birula, 1899 (Iuridae) remained monotypic since its description. Its sole species, Calchas nordmanni Birula, 1899, was known only from northeastern Turkey until Kinzelbach (1980) published first records from southern and southeastern Turkey. A few more localities have been reported from Turkey; the species was also found on two Greek islands, Samos and Megisti. We analyzed significant material (63 specimens, including a previously unpublished large series from Naturhistorisches Museum Wien), and concluded that three distinct, disjunct species exist rather than one widespread species as previously thought. Two new species are described: Calchas birulai sp. …

Ecological Niche Modeling Of Two Scorpion Species Mesobuthus Eupeus (C. L. Koch, 1839) And M. Phillipsii (Pocock, 1889) From The Iranian Plateau And Zagros Region (Arachnida: Scorpiones), Omid Mirshamsi

Euscorpius

Ecological niche modeling has allowed several advances in the process of species delimitation. In the present study, I used this method to evaluate the climatic divergence between two scorpion species, Mesobuthus eupeus and M. phillipsii. The ecological niche models (ENMs) were created based on presence-only data with the maximum entropy method. The created models, results of spatial analysis (PCA and Hotelling discriminant), and an identity test suggested that the divergence between these two species is associated with significant divergence in their ecological niches. The results of this study provide additional support for the taxonomic validity the studied species.

A New Species Of Tityus C. L. Koch, 1836 (Scorpiones: Buthidae) From Dominican Amber, Wilson R. Lourenço

Euscorpius

Tityus azari sp. n., a new species of fossil scorpion belonging to the genus Tityus C. L. Koch, 1836 is described based on a specimen in amber from the Dominican Republic. Although the new species can be associated with the extant fauna of the Neotropical region, it presents some particular morphological features such as the presence of sharp denticles on the edge of pedipalp fingers. Due to the incompleteness of the specimen it cannot be assigned to any precise extant subgenera. Once again, this discovery attests to a considerable degree of diversity in the Dominican amber-producing forests.

The Cretaceous Scorpion Genus, Archaeobuthus, Revisited (Scorpiones: Archaeobuthidae), Chris Baptista, Jorge A. Santiago-Blay, Victor Fet, Michael E. Soleglad

Euscorpius

No abstract provided.

The Scorpions Of Hainan Island, China (Arachnida: Scorpiones), Zhi-Yong Di, Zhi-Jian Cao, Ying-Liang Wu, Lin Zhu, Hui Liu, Wen-Xin Li

Euscorpius

The redescriptions and illustrations of three species, Isometrus (Isometrus) maculatus (DeGeer, 1778), Lychas mucronatus (Fabricius, 1798) (Buthidae), and Liocheles australasiae (Fabricius, 1775) (Hemiscorpiidae) from Hainan Island, China are presented. Distribution data and updated key of Hainan scorpions are provided.

Review Of The Subgenus Pandinurus Fet, 1997 With Descriptions Of Three New Species (Scorpiones, Scorpionidae, Pandinus)., František Kovařík

Euscorpius

Pandinus (Pandinurus) awashensis sp. n. from Ethiopia, P. (P.) somalilandus sp. n. from Somaliland, and P. (P.) lowei sp. n. from Democratic Republic of Congo are described and compared with other species of the subgenus. P. (P.) sudanicus Hirst, 1911 stat. n. previously considered a synonym of P. (P.) magrettii Borelli, 1901 is recognized as a valid species. New data on taxonomic characters and distribution of the subgenus Pandinurus are presented. Also presented are a map of distribution, photos of the localities and a key to species using hitherto unpublished characters of the tarsomere spination formula and sexual …

Estimated Losses Of Plant Biodiversity Across The U.S. From Historical N Deposition From 1985—2010., Christopher M. Clark, Philip E. Morefield, Frank S. Gilliam, Linda H. Pardo

Biological Sciences Faculty Research

Although nitrogen (N) deposition is a significant threat to herbaceous plant biodiversity worldwide, it is not a new stressor for many developed regions. Only recently has it become possible to estimate historical impacts nationally for the United States. We used 26 years (1985–2010) of deposition data, with ecosystem-specific functional responses from local field experiments and a national critical loads (CL) database, to generate scenario-based estimates of herbaceous species loss. Here we show that, in scenarios using the low end of the CL range, N deposition exceeded critical loads over 0.38, 6.5, 13.1, 88.6, and 222.1 million ha for the Mediterranean …

Cyclooxygenase-2 Dependent Metabolism Of 20-Hete Increases Adiposity And Adipocyte Enlargement In Mesenchymal Stem Cell-Derived Adipocytes, Dong Hyun Kim, Nitin Puri, Komal Sodhi, John R. Falck, Nader G. Abraham, Joseph I. Shapiro M.D., Michal L. Schwartzman

Biochemistry and Microbiology

Abstract 20-Hydroxy-5,8,11,14-eicosatetraenoic acid (20-HETE), a product of the cytochrome P450 (CYP)-catalyzed [1] -hydroxylation of arachidonic acid, induces oxidative stress and, in clinical studies, is associated with increased body mass index (BMI) and the metabolic syndrome. This study was designed to examine the effects of exogenous 20- HETE on mesenchymal stem cell (MSC)-derived adipocytes.

The expression levels of CYP4A11 and CYP4F2 (major 20-HETE synthases in humans) in MSCs decreased during adipocyte differentiation; however, exogenous administration of 20-HETE (0.1–1 M) increased adipogenesis in a dose dependent manner in these cells ( P < 0.05). The inability of a 20-HETE analog to reproduce these effects suggested the involvement of a metabolic product of 20-HETE in mediating its pro-adipogenic effects. A cyclooxygenase (COX)-1 selective inhibitor enhanced, whereas a COX-2 selective or a dual COX-1/2 inhibitor attenuated adipogenesis induced by 20-HETE. The COX-derived metabolite of 20-HETE, 20-OH-PGE 2 , enhanced adipogenesis and lipid accumulation in MSCs. The pro-adipogenic effects of 20-HETE and 20-OH-PGE 2 resulted in the increased expression of the adipogenic regulators PPAR and -catenin in MSC-derived adipocytes. Taken together we show for the fi rst time that 20-HETE-derived COX-2-dependent 20-OH-PGE 2 enhances mature infl amed adipocyte hypertrophy in MSC undergoing adipogenic differentiation. — Kim, D. H., N. Puri, K. Sodhi, J. R. Falck, N. G. Abraham, J. Shapiro, and M. L. Schwartzman. Cyclooxygenase-2 dependent metabolism of 20-HETE increasesadiposity and adipocyte enlargement in mesenchymal stem cell-derived adipocytes.

Effectiveness Of Manual Palpation In The Northern Water Snake, Nerodia Sipedon Sipedon, As A Method To Extract Gut Contents For Dietary Studies, Marcella Ann Cruz

Theses, Dissertations and Capstones

The Common Water Snake, Nerodia sipedon sipedon, is one of six subspecies, and the only species of Nerodia to inhabit West Virginia. Because it is abundant and information on the species is lacking within the state, it was used as my study organism. The effectiveness of manual palpation, the most commonly used method in snake diet related studies, was tested against museum dissection by comparing presence and absence of gut contents. Nineteen individuals of 76 manually palpated collected snakes were compared to 6 individuals of 37 dissected snakes using a Pearson chi-square analysis. Results suggested manual palpation is an effective …