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Articles 1 - 30 of 65
Full-Text Articles in Life Sciences
Demographics And Seasonal Abundance Of Sportfish In Three Thermal Habitats Of Coffeen Lake, Anthony Paul Porreca
Demographics And Seasonal Abundance Of Sportfish In Three Thermal Habitats Of Coffeen Lake, Anthony Paul Porreca
Masters Theses
No abstract provided.
Late Embryogenesis Abundant Proteins Protect Human Hepatoma Cells During Acute Desiccation, Shumin Li, Nilay Chakraborty, Apurva Borcar, Michael A. Menze, Mehmet Toner, Steven C. Hand
Late Embryogenesis Abundant Proteins Protect Human Hepatoma Cells During Acute Desiccation, Shumin Li, Nilay Chakraborty, Apurva Borcar, Michael A. Menze, Mehmet Toner, Steven C. Hand
Faculty Research & Creative Activity
Expression of late embryogenesis abundant (LEA) proteins is highly correlated with desiccation tolerance in anhydrobiotic animals, selected land plants, and bacteria. Genes encoding two LEA proteins, one localized to the cytoplasm/nucleus (AfrLEA2) and one targeted to mitochondria (AfrLEA3m), were stably transfected into human HepG2 cells. A trehalose transporterwas used for intracellular loading of this disaccharide. Cellswere rapidly and uniformly desiccated to low water content (<0.12 g H2O/g dry weight) with a recently developed spin-drying technique. Immediately on rehydration, control cells without LEA proteins or trehalose exhibited 0% membrane integrity, comparedwith 98% in cells loaded with trehalose and expressing AfrLEA2 or AfrLEA3m; surprisingly, AfrLEA3m without trehalose conferred 94% protection. Cell proliferation across 7 d showed an 18-fold increase for cells dried with AfrLEA3m and trehalose, compared with 27-fold for nondried controls. LEA proteins dramatically enhance desiccation tolerance in mammalian cells and offer the opportunity for engineering biostability in the dried state.
Metabolic Preconditioning Of Mammalian Cells: Mimetic Agents For Hypoxia Lack Fidelity In Promoting Phosphorylation Of Pyruvate Dehydrogenase, Apurva Borcar, Michael A. Menze, Mehmet Toner, Steven C. Hand
Metabolic Preconditioning Of Mammalian Cells: Mimetic Agents For Hypoxia Lack Fidelity In Promoting Phosphorylation Of Pyruvate Dehydrogenase, Apurva Borcar, Michael A. Menze, Mehmet Toner, Steven C. Hand
Faculty Research & Creative Activity
Induction of HIF-1α by oxygen limitation promotes increased phosphorylation and catalytic depression of mitochondrial pyruvate dehydrogenase (PDH) and an enhanced glycolytic poise in cells. Cobalt chloride and desferrioxamine are widely used as mimics for hypoxia because they increase the levels of HIF-1α. We evaluated the ability of these agents to elicit selected physiological responses to hypoxia as a means to metabolically precondition mammalian cells, but without the detrimental effects of hypoxia. We show that, while CoCl2 does increase HIF-1α in a dose-dependent manner, it unexpectedly and strikingly decreases PDH phosphorylation at E1α sites 1, 2, and 3 (Ser293, Ser300, and …
Intracellular Expression Of An Ice Nucleation Protein Reduces Cryoinjury In Insect Cells, Avril M. Harder
Intracellular Expression Of An Ice Nucleation Protein Reduces Cryoinjury In Insect Cells, Avril M. Harder
Student Honors Theses
Exposure of insect cells to subzero temperatures typically leads to cell membrane disruption and lethal intracellular ice formation. This study seeks to examine the cryoprotective value of trangenically expressing a bacterial ice nucleation protein (INP) in Spodoptera frugiperda (Sf-21) cells. The bacterium Pseudomonas syringae naturally produces a membrane-bound INP (inaZ), capable of structuring water and initiating ice formation at temperatures as high as -2 °C. I hypothesized that intracellular expression of an altered form of inaZ (PsINP) in Sf-21 cells will mediate highly regulated ice nucleation when cells are cooled to -80 °C in a slow, controlled manner, …
Long-Term Effects Of Estradiol Replacement In The Olfactory System, Britto P. Nathan, Michael Tonsor, Robert G. Struble
Long-Term Effects Of Estradiol Replacement In The Olfactory System, Britto P. Nathan, Michael Tonsor, Robert G. Struble
Britto P. Nathan
Olfactory dysfunction often precedes other clinical symptoms in chronic neurodegenerative diseases like Alzheimer’s and Parkinson’s disease. Estrogen deficiency and apoE genotype are known risk factors in these diseases and these factors also affect olfaction. Therefore we examined the effects of estradiol replacement following ovariectomy on expression of apoE and markers of cell proliferation, neuronal maturation, synaptogenesis and reactive gliosis in the primary olfactory pathway of wild-type (WT) and apoE knockout (KO) mice. Estradiol replacement increased apoE staining in the olfactory nerve and glomerular layers. Estradiol increased astrocyte density and olfactory epithelium (OE) thickness regardless of the genotype. In addition estradiol …
Long-Term Effects Of Estradiol Replacement In The Olfactory System, Britto P. Nathan, Michael Tonsor, Robert G. Struble
Long-Term Effects Of Estradiol Replacement In The Olfactory System, Britto P. Nathan, Michael Tonsor, Robert G. Struble
Faculty Research & Creative Activity
Olfactory dysfunction often precedes other clinical symptoms in chronic neurodegenerative diseases like Alzheimer’s and Parkinson’s disease. Estrogen deficiency and apoE genotype are known risk factors in these diseases and these factors also affect olfaction. Therefore we examined the effects of estradiol replacement following ovariectomy on expression of apoE and markers of cell proliferation, neuronal maturation, synaptogenesis and reactive gliosis in the primary olfactory pathway of wild-type (WT) and apoE knockout (KO) mice. Estradiol replacement increased apoE staining in the olfactory nerve and glomerular layers. Estradiol increased astrocyte density and olfactory epithelium (OE) thickness regardless of the genotype. In addition estradiol …
Long-Term Effects Of Estradiol Replacement In The Olfactory System, Britto Nathan, Michael Tonsor, Robert Struble
Long-Term Effects Of Estradiol Replacement In The Olfactory System, Britto Nathan, Michael Tonsor, Robert Struble
Faculty Research & Creative Activity
Olfactory dysfunction often precedes other clinical symptoms in chronic neurodegenerative diseases like Alzheimer’s and Parkinson’s disease. Estrogen deficiency and apoE genotype are known risk factors in these diseases and these factors also affect olfaction. Therefore we examined the effects of estradiol replacement following ovariectomy on expression of apoE and markers of cell proliferation, neuronal maturation, synaptogenesis and reactive gliosis in the primary olfactory pathway of wild-type (WT) and apoE knockout (KO) mice. Estradiol replacement increased apoE staining in the olfactory nerve and glomerular layers. Estradiol increased astrocyte density and olfactory epithelium (OE) thickness regardless of the genotype. In addition estradiol …
Verbena Urticifolia L., Gordon C. Tucker
Verbena Urticifolia L., Gordon C. Tucker
Acer Negundo L., Wayne Longbottom
Long-Term Survival Of Anoxia Despite Rapid Atp Decline In Embryos Of The Annual Killifish Austrofundulus Limnaeus, Jason E. Podrabsky, Michael A. Menze, Steven C. Hand
Long-Term Survival Of Anoxia Despite Rapid Atp Decline In Embryos Of The Annual Killifish Austrofundulus Limnaeus, Jason E. Podrabsky, Michael A. Menze, Steven C. Hand
Faculty Research & Creative Activity
Embryos of the annual killifish Austrofundulus limnaeus can survive for months in the complete absence of oxygen. Survival of anoxia is associated with entry into a state of metabolic dormancy known as diapause. However, extreme tolerance of anoxia is retained for several days of post-diapause development. Rates of heat dissipation in diapause II and 4 days post-diapause II embryos were measured under aerobic conditions and during the transition into anoxia. Phosphorylated adenylate compounds were quantified in embryos during entry into anoxia and after 12 hr of aerobic recovery. Rates of heat dissipation were not affected by exposure to anoxia in …
A New Species Of Saphonecrus (Hymenoptera, Cynipoidea) Associated With Plant Galls On Castanopsis (Fagaceae) In China, Zhiwei Liu, Xiao-Hui Yang, Dao-Hong Zhu, Yi-Yuan He
A New Species Of Saphonecrus (Hymenoptera, Cynipoidea) Associated With Plant Galls On Castanopsis (Fagaceae) In China, Zhiwei Liu, Xiao-Hui Yang, Dao-Hong Zhu, Yi-Yuan He
Zhiwei Liu
A new cynipid species, Saphonecrus hupingshanensis Liu, Yang, et Zhu, sp. nov. (Hymenoptera: Cynipidae: Synergini), is described from China. This is the first species of the inquilinous tribe Synergini ever known to have an association with chinquapins (Fagaceae: Castanopsis). The biology and implication to species diversity of Cynipidae in eastern and southeast Asia are discussed.
A New Species Of Saphonecrus (Hymenoptera, Cynipoidea) Associated With Plant Galls On Castanopsis (Fagaceae) In China, Zhiwei Liu, Xiao-Hui Yang, Dao-Hong Zhu, Yi-Yuan He
A New Species Of Saphonecrus (Hymenoptera, Cynipoidea) Associated With Plant Galls On Castanopsis (Fagaceae) In China, Zhiwei Liu, Xiao-Hui Yang, Dao-Hong Zhu, Yi-Yuan He
Faculty Research & Creative Activity
A new cynipid species, Saphonecrus hupingshanensis Liu, Yang, et Zhu, sp. nov. (Hymenoptera: Cynipidae: Synergini), is described from China. This is the first species of the inquilinous tribe Synergini ever known to have an association with chinquapins (Fagaceae: Castanopsis). The biology and implication to species diversity of Cynipidae in eastern and southeast Asia are discussed.
A New Species Of Saphonecrus (Hymenoptera, Cynipoidea) Associated With Plant Galls On Castanopsis (Fagaceae) In China, Zhiwei Liu, Xiao-Hui Yang, Dao-Hong Zhu, Yi-Yuan He
A New Species Of Saphonecrus (Hymenoptera, Cynipoidea) Associated With Plant Galls On Castanopsis (Fagaceae) In China, Zhiwei Liu, Xiao-Hui Yang, Dao-Hong Zhu, Yi-Yuan He
Faculty Research & Creative Activity
A new cynipid species, Saphonecrus hupingshanensis Liu, Yang, et Zhu, sp. nov. (Hymenoptera: Cynipidae: Synergini), is described from China. This is the first species of the inquilinous tribe Synergini ever known to have an association with chinquapins (Fagaceae: Castanopsis). The biology and implication to species diversity of Cynipidae in eastern and southeast Asia are discussed.
Samolus Parviflorus Raf., Loy R. Phillippe
Morus Rubra L., Loy R. Phillippe, Connie Carroll-Cunningham, Richard L. Larimore, Danielle Ruffatto
Morus Rubra L., Loy R. Phillippe, Connie Carroll-Cunningham, Richard L. Larimore, Danielle Ruffatto
Specimens by Name
No abstract provided.
Comparing Thigh Muscle Cross-Sectional Area And Squat Strength Among National Class Olympic Weightlifters, Power Lifters, And Bodybuilders, James J. Di Naso, Brian L. Pritschet, John D. Emmett, Jill W. Owen, Jeffrey Willardson, Travis W. Beck, Jason M. Defreitas, Fabio E. Fontana
Comparing Thigh Muscle Cross-Sectional Area And Squat Strength Among National Class Olympic Weightlifters, Power Lifters, And Bodybuilders, James J. Di Naso, Brian L. Pritschet, John D. Emmett, Jill W. Owen, Jeffrey Willardson, Travis W. Beck, Jason M. Defreitas, Fabio E. Fontana
Faculty Research and Creative Activity
Few studies have compared anthropometric characteristics among national class athletes from different resistance training disciplines, such as Olympic Weightlifting (OL), Power Lifting (PL), and Bodybuilding (BB). Objective: The purpose of the current study was to determine if significant differences exist in the relationship between thigh muscle cross-sectional area and back squat strength among national class athletes from the sports of OL, PL, and BB. Methods: Fifteen national class athletes were assessed for back squat strength, mid-thigh circumference, and mid-thigh skinfold from which total thigh cross-sectional was estimated. A series of One-Way ANOVAs and Pearson Product Moment Correlations were used to …
Vitis Riparia Michx., Gordon C. Tucker
Fraxinus Pennsylvanica Marsh., Loy R. Phillippe
Fraxinus Pennsylvanica Marsh., Loy R. Phillippe
Specimens by Name
No abstract provided.
Viola Striata Aiton, Loy R. Phillippe
Genome Wide Analysis Of Hepatic Gene Silencing In Mammalian Cell Variants, Jeffrey L. Kurkewich
Genome Wide Analysis Of Hepatic Gene Silencing In Mammalian Cell Variants, Jeffrey L. Kurkewich
Undergraduate Honors Theses
Using microarray data, a genome wide analysis of hepatic gene-silencing in four hepatoma variant cell lines was carried out. The purpose of this analysis was to identify candidate genes that may be able to restore liver function in non-functional cell variants, ultimately giving insight into the mechanisms behind global hepatic gene expression. Based on a selection scheme allowing only for genes activated or repressed at least 5 fold in 2 out of the 4 variant cell lines, 225 genes were found to be repressed while a total of 76 genes were found to be activated. Of the repressed genes identified, …
Taxonomic Revision Of True Morels (Morchella) In Canada And The United States, Michael Kuo, Damon R. Dewsbury, Kerry O'Donnell, M. Carol Carter, John David Moore, Stephen A. Renner, Jean-Marc Moncalvo, Stephen A. Canfield, Steven L. Stephenson, Andrew S. Methven, Thomas J. Volk
Taxonomic Revision Of True Morels (Morchella) In Canada And The United States, Michael Kuo, Damon R. Dewsbury, Kerry O'Donnell, M. Carol Carter, John David Moore, Stephen A. Renner, Jean-Marc Moncalvo, Stephen A. Canfield, Steven L. Stephenson, Andrew S. Methven, Thomas J. Volk
Andrew S. Methven
Recent molecular phylogenetic studies have revealed the existence of at least 50 species of Morchella worldwide and demonstrated a high degree of continental endemism within the genus. Here we describe 19 phylogenetic species of Morchella from North America, 14 of which are new (M. diminutiva, M. virginiana, M. esculentoides, M. prava, M. cryptica, M. frustrata, M. populiphila, M. sextelata, M. septimelata, M. capitata, M. importuna, M. snyderi, M. brunnea and M. septentrionalis). Existing species names (M. rufobrunnea, M. tomentosa, M. punctipes and M. angusticeps) are applied to four phylogenetic species, and formal description of one species (M. sp. "Mel-8") is …
Effects Of Hot Water On Breaking Seed Dormancy Of The Endangered Kankakee Mallow (Iliamna Remota Greene (Malvaceae), April Mcdonnell, Marissa Grant, Janice M. Coons
Effects Of Hot Water On Breaking Seed Dormancy Of The Endangered Kankakee Mallow (Iliamna Remota Greene (Malvaceae), April Mcdonnell, Marissa Grant, Janice M. Coons
Faculty Research & Creative Activity
Iliamna remota Greene (Kankakee mallow, Malvaceae) is listed as endangered in Illinois and is endemic to Langham Island in the Kankakee River, Kankakee County, Illinois. Information on ways to break seed dormancy of I. remota would be useful for restoration and management. The purpose of this study was to determine if hot water at different temperatures and for different lengths of time would break seed dormancy. Seeds were dipped for 60 seconds into water at 70, 80, 90 or 100 degrees C with 22 degrees C dips as a control. In another trial, seeds were dipped into 80 degrees C …
Taxonomic Revision Of True Morels (Morchella) In Canada And The United States, Michael Kuo, Damon R. Dewsbury, Kerry O'Donnell, M. Carol Carter, John David Moore, Stephen A. Renner, Jean-Marc Moncalvo, Stephen A. Canfield, Steven L. Stephenson, Andrew S. Methven, Thomas J. Volk
Taxonomic Revision Of True Morels (Morchella) In Canada And The United States, Michael Kuo, Damon R. Dewsbury, Kerry O'Donnell, M. Carol Carter, John David Moore, Stephen A. Renner, Jean-Marc Moncalvo, Stephen A. Canfield, Steven L. Stephenson, Andrew S. Methven, Thomas J. Volk
Faculty Research & Creative Activity
Recent molecular phylogenetic studies have revealed the existence of at least 50 species of Morchella worldwide and demonstrated a high degree of continental endemism within the genus. Here we describe 19 phylogenetic species of Morchella from North America, 14 of which are new (M. diminutiva, M. virginiana, M. esculentoides, M. prava, M. cryptica, M. frustrata, M. populiphila, M. sextelata, M. septimelata, M. capitata, M. importuna, M. snyderi, M. brunnea and M. septentrionalis). Existing species names (M. rufobrunnea, M. tomentosa, M. punctipes and M. angusticeps) are applied to four phylogenetic species, and formal description of one species (M. sp. "Mel-8") is …
Trehalose Transporter From African Chironomid Larvae Improves Desiccation Tolerance Of Chinese Hamster Ovary Cells, Nilay Chakraborty, Michael A. Menze, Heidi Elmoazzen, Halong Vu, Martin Yarmush, Steven C. Hand, Mehmet Toner
Trehalose Transporter From African Chironomid Larvae Improves Desiccation Tolerance Of Chinese Hamster Ovary Cells, Nilay Chakraborty, Michael A. Menze, Heidi Elmoazzen, Halong Vu, Martin Yarmush, Steven C. Hand, Mehmet Toner
Faculty Research & Creative Activity
Dry preservation has been explored as an energy-efficient alternative to cryopreservation, but the high sensitivity of mammalian cells to desiccation stress has been one of the major hurdles in storing cells in the desiccated state. An important strategy to reduce desiccation sensitivity involves use of the disaccharide trehalose. Trehalose is known to improve desiccation tolerance in mammalian cells when present on both sides of the cell membrane. Because trehalose is membrane impermeant the development of desiccation strategies involving this promising sugar is hindered. We explored the potential of using a high-capacity trehalose transporter (TRET1) from the African chironomid Polypedilum vanderplanki[21] …
Using Comparative Genomics For Inquiry-Based Learning To Dissect Virulence Of Escherichia Coli O157:H7 And Yersinia Pestis, David J. Baumler, Lois M. Banta, Kai F. Hung, Jodi A. Schwarz, Eric L. Cabot, Jeremy D. Glasner, Nicole T. Perna
Using Comparative Genomics For Inquiry-Based Learning To Dissect Virulence Of Escherichia Coli O157:H7 And Yersinia Pestis, David J. Baumler, Lois M. Banta, Kai F. Hung, Jodi A. Schwarz, Eric L. Cabot, Jeremy D. Glasner, Nicole T. Perna
Faculty Research & Creative Activity
Genomics and bioinformatics are topics of increasing interest in undergraduate biological science curricula. Many existing exercises focus on gene annotation and analysis of a single genome. In this paper, we present two educational modules designed to enable students to learn and apply fundamental concepts in comparative genomics using examples related to bacterial pathogenesis. Students first examine alignments of genomes of Escherichia coli O157:H7 strains isolated from three food-poisoning outbreaks using the multiple-genome alignment tool Mauve. Students investigate conservation of virulence factors using the Mauve viewer and by browsing annotations available at the A Systematic Annotation Package for Community Analysis of …
Taxonomic Revision Of True Morels (Morchella) In Canada And The United States, Michael Kuo, Damon Dewsbury, Kerry O'Donnell, M. Carter, John Moore, Stephen Renner, Jean-Marc Moncalvo, Stephen Canfield, Steven Stephenson, Andrew Methven, Thomas Volk
Taxonomic Revision Of True Morels (Morchella) In Canada And The United States, Michael Kuo, Damon Dewsbury, Kerry O'Donnell, M. Carter, John Moore, Stephen Renner, Jean-Marc Moncalvo, Stephen Canfield, Steven Stephenson, Andrew Methven, Thomas Volk
Faculty Research & Creative Activity
Recent molecular phylogenetic studies have revealed the existence of at least 50 species of Morchella worldwide and demonstrated a high degree of continental endemism within the genus. Here we describe 19 phylogenetic species of Morchella from North America, 14 of which are new (M. diminutiva, M. virginiana, M. esculentoides, M. prava, M. cryptica, M. frustrata, M. populiphila, M. sextelata, M. septimelata, M. capitata, M. importuna, M. snyderi, M. brunnea and M. septentrionalis). Existing species names (M. rufobrunnea, M. tomentosa, M. punctipes and M. angusticeps) are applied to four phylogenetic species, and formal description of one species (M. sp. "Mel-8") is …
Size Assortment In Mixed-Species Groups Of Juvenile-Phase Striped Parrotfish (Scarus Iserti) In The Bahamas, Paul Switzer, Daniel Quinn
Size Assortment In Mixed-Species Groups Of Juvenile-Phase Striped Parrotfish (Scarus Iserti) In The Bahamas, Paul Switzer, Daniel Quinn
Paul V. Switzer
Striped parrotfish (Scarus iserti) often form heterospecific groups with other reef fishes. In this study, we examined the species and body size composition of these groups on reefs in The Bahamas. Groups averaged approximately 4 S. iserti and 2 associated species, with surgeonfish (Acanthurus chirurgus and A. bahianus), slippery dick (Halichoeres bivittatus), and bluehead wrasse (Thalassoma bifasciatum) as the most common associates. Fewer groups than expected had only 1 associate; groups with 3 or more associates were more common than expected. Both the S. iserti and associated species tended to be closely sizematched within a group, perhaps due to benefits …
Using Comparative Genomics For Inquiry-Based Learning To Dissect Virulence Of Escherichia Coli O157:H7 And Yersinia Pestis, David J. Baumler, Lois M. Banta, Kai F. Hung, Jodi A. Schwarz, Eric L. Cabot, Jeremy D. Glasner, Nicole T. Perna
Using Comparative Genomics For Inquiry-Based Learning To Dissect Virulence Of Escherichia Coli O157:H7 And Yersinia Pestis, David J. Baumler, Lois M. Banta, Kai F. Hung, Jodi A. Schwarz, Eric L. Cabot, Jeremy D. Glasner, Nicole T. Perna
Kai F. Hung
Genomics and bioinformatics are topics of increasing interest in undergraduate biological science curricula. Many existing exercises focus on gene annotation and analysis of a single genome. In this paper, we present two educational modules designed to enable students to learn and apply fundamental concepts in comparative genomics using examples related to bacterial pathogenesis. Students first examine alignments of genomes of Escherichia coli O157:H7 strains isolated from three food-poisoning outbreaks using the multiple-genome alignment tool Mauve. Students investigate conservation of virulence factors using the Mauve viewer and by browsing annotations available at the A Systematic Annotation Package for Community Analysis of …
Isolation And Characterization Of Galactinol Synthases From Hybrid Poplar, Faride Unda, Thomas Canam, Lindsay Preston, Shawn D. Mansfield
Isolation And Characterization Of Galactinol Synthases From Hybrid Poplar, Faride Unda, Thomas Canam, Lindsay Preston, Shawn D. Mansfield
Thomas Canam
The raffinose family of oligosaccharides (RFOs) serve as transport carbohydrates in the phloem, storage compounds in sink tissues, and putative biological agents to combat both abiotic and biotic stress in several plant species. To investigate further the functional roles of this class of compounds in trees, two cDNAs encoding galactinol synthase (GolS, EC 2.4.1.123), which catalyses the first step in the biosynthesis of RFOs, were identified and cloned from hybrid poplar (Populus alba3grandidentata). Phylogenetic analyses of the Populus GolS isoforms with other known GolS proteins suggested a putative role for these enzymes during biotic or abiotic stress in hybrid poplar. …