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Implementation Of A Genome-Wide Survey Of Induced Mutations To Identify Agronomically Valuable Variants In Chenopodium Quinoa, Andrew Alarcon Parker Apr 2022

Implementation Of A Genome-Wide Survey Of Induced Mutations To Identify Agronomically Valuable Variants In Chenopodium Quinoa, Andrew Alarcon Parker

Theses and Dissertations

Quinoa has been utilized for millennia in the Andes region of South America as a nutritious and hardy food crop. In recent years interest in quinoa has grown as need increases for an alternative to traditional cereal crops that can tolerate marginal environments while offering superior nutrition. Growers outside the Andes have experienced several complications adopting quinoa, including undesirable secondary metabolites, poor yield, lodging, and height inconsistency. Unfortunately, access to native ecotypes for crop improvement is limited, and desirable traits are difficult to introduce into available quinoa cultivars because of its allotetraploid genome and tendency to self-pollinate. A genome-wide survey …


Testing The Potential Of Novel Grain Crop Cultivation In Rural Malawi During The Dry Season Through Irrigation And Soil Modification, Jessica Truman Apr 2018

Testing The Potential Of Novel Grain Crop Cultivation In Rural Malawi During The Dry Season Through Irrigation And Soil Modification, Jessica Truman

Undergraduate Honors Theses

This research project studied the germination and growth rates of oat and quinoa crops in Mtalimanja, Malawi. This project was part of a larger effort by General Mills and Brigham Young University researchers to increase the diversity and nutrient content of crops in impoverished countries worldwide. It was conducted from May to August 2017 during Malawi’s dry season. Tetraploid oats and quinoa, both modified to increase the protein content of harvested grains, were planted under three different soil conditions: unamended soil, soil mixed with composted chicken litter, and soil with surface-applied granular fertilizer. The research plots were watered daily except …


Characterization Of The Granule-Bound Starch Synthase I Gene In Chenopodium, Douglass C. Brown Jun 2014

Characterization Of The Granule-Bound Starch Synthase I Gene In Chenopodium, Douglass C. Brown

Theses and Dissertations

Chenopodium L. is a relatively under-studied genus that includes the cultivated seed crop quinoa (Chenopodium quinoa Willd.). Quinoa is an allotetraploid (2n=4x=36, AABB genomes) that is cultivated by subsistence farmers and commercial growers in the Andean regions of South America. Approximately 60% of a quinoa seed is starch, a glucose polymer that is an important carbohydrate energy source in the human diet. Seed starch is normally comprised of amylose and amylopectin in a 1:3 ratio, but starches with different amylose:amylopectin ratios have different properties and potential uses. The accumulation of the amylose fraction of starch is controlled by a single …


Application Of Genome Reduction, Next Generation Sequencing, And Kaspar Genotyping In Development, Characterization, And Linkage Mapping Of Single Nucleotide Polymorphisms In The Grain Amaranths And Quinoa, Scott Matthew Smith Mar 2013

Application Of Genome Reduction, Next Generation Sequencing, And Kaspar Genotyping In Development, Characterization, And Linkage Mapping Of Single Nucleotide Polymorphisms In The Grain Amaranths And Quinoa, Scott Matthew Smith

Theses and Dissertations

The grain amaranths (Amaranthus sp.) and quinoa (Chenopodium quinoa Willd.) are important seed crops in South America. These crops have gained international attention in recent years for their nutritional quality and tolerance to abiotic stress. We report the identification and development of functional single nucleotide polymorphism (SNP) assays for both amaranth and quinoa. SNPs were identified using a genome reduction protocol and next generation sequencing. SNP assays are based on KASPar genotyping chemistry and were detected using the Fluidigm dynamic array platform. A diversity screen consisting of 41 amaranth accessions showed that the minor allele frequency (MAF) of the amaranth …


Physiological Assessment Of Chenopodium Quinoa To Salt Stress, Arturo Jason Morales Jul 2009

Physiological Assessment Of Chenopodium Quinoa To Salt Stress, Arturo Jason Morales

Theses and Dissertations

The physiological responses to salt stress were measured in Chenopodium quinoa. In a greenhouse experiment, salt water was applied to the quinoa varieties, Chipaya and KU-2, and to the model halophyte Thellungiella halophila to assess their relative responses to salt stress. Height and weight data from a seven-week time course demonstrated that both cultivars exhibited greater tolerance to salt than T. halophila. In a growth chamber experiment, three quinoa cultivars, Chipaya, Ollague, and CICA 17 were hydroponically grown and physiological responses were measured with four salt treatments. Tissues collected from the growth chamber treatments were used to obtain …


Physical Mapping Of Ribosomal Genes In New World Members Of The Genus Chenopodium Using Fluorescence In Situ Hybridization, Maria C. Sederberg Oct 2008

Physical Mapping Of Ribosomal Genes In New World Members Of The Genus Chenopodium Using Fluorescence In Situ Hybridization, Maria C. Sederberg

Theses and Dissertations

The genus Chenopodium contains many economically important species in the New World, but is relatively understudied and poorly understood, especially in terms of evolutionary relationships. A better understanding of the structure of this genus could significantly help in breeding efforts on its cultivated members, notably the tetraploid C. quinoa and also certain varieties of C. berlandieri, also tetraploid. Of special concern is determining which diploid weed species are the most likely ancestors for C. quinoa, C. berlandieri, and the other tetraploid members of subsection Cellulata. The phylogeny can be understood in part by examining the ribosomal RNA loci and observing …


Evaluation Of Downy Mildew (Peronospora Farinosa F.Sp. Chenopodii) Resistance Among Quinoa Genotypes And Investigation Of P. Farinosa Growth Using Scanning Electron Microscopy, Leilani Kitz Jul 2008

Evaluation Of Downy Mildew (Peronospora Farinosa F.Sp. Chenopodii) Resistance Among Quinoa Genotypes And Investigation Of P. Farinosa Growth Using Scanning Electron Microscopy, Leilani Kitz

Theses and Dissertations

Quinoa (Chenopodium quinoa Willd.) is a pseudocereal native to the Andean region of South America and a staple crop for subsistence farmers in the altiplano of Bolivia and Peru. Downy mildew is the most significant disease of quinoa caused by the pathogen Peronospora farinosa f.sp. chenopodii Byford. This disease greatly impacts quinoa crops with yield losses up to 99%. As fungicides are expensive for farmers, the development of resistant cultivars appears to be the most efficient means for controlling downy mildew. The quinoa germplasm bank contains high amounts of genetic diversity, some of which exhibit mildew resistance. Methods for evaluating …


Identification, Sequencing, Expression And Evolutionary Relationships Of The 11s Seed Storage Protein Gene In Chenopodium Quinoa Willd., Marie Renee Barrett Balzotti Jul 2006

Identification, Sequencing, Expression And Evolutionary Relationships Of The 11s Seed Storage Protein Gene In Chenopodium Quinoa Willd., Marie Renee Barrett Balzotti

Theses and Dissertations

Quinoa (Chenopodium quinoa) is an Andean crop adapted to harsh environmental conditions and containing a high and well-balanced protein composition. Two seed storage proteins, the 2S albumin and 11S globulin, are the major amino acid reservoirs for the developing seedling. An in-depth study of the genes encoding these proteins is necessary to understand the source of quinoa's protein quality. Our objectives include identification and sequencing of the 11S genomic and cDNA clones, analysis of 11S expression profiles in different quinoa accessions and evaluation of evolutionary relationships between the sequence of the 11S gene in quinoa and homologous genes in other …


Simple Sequence Repeat Development, Polymorphism And Genetic Mapping In Quinoa (Chenopodium Quinoa Willd.), David Jarvis Jul 2006

Simple Sequence Repeat Development, Polymorphism And Genetic Mapping In Quinoa (Chenopodium Quinoa Willd.), David Jarvis

Theses and Dissertations

Quinoa is an important, highly nutritional grain crop in the Andean region of South America. DNA markers and linkage maps are important tools for the improvement of underdeveloped crops such as quinoa. The objectives of this study were to (i) develop a new set of SSR markers to augment the number of SSR markers available in quinoa, and (ii) construct a new genetic linkage map of quinoa based on SSRs using multiple recombinant-inbred line (RIL) populations. Here we report the development of 216 new polymorphic SSR markers from libraries enriched for GA, CAA, and AAT repeats, as well as 6 …


Application Of Different Levels Of Byproducts From Quinua (Chenopodium Quinoa Willd.) In The Preparation Of Rations For Guinea Pigs (Cavia Porcellus L.) In The Growing And Fattening Stages, Grover Antonio Aduviri Paredes Jan 2006

Application Of Different Levels Of Byproducts From Quinua (Chenopodium Quinoa Willd.) In The Preparation Of Rations For Guinea Pigs (Cavia Porcellus L.) In The Growing And Fattening Stages, Grover Antonio Aduviri Paredes

Theses and Dissertations

From quinua crop residue it is possible to obtain byproducts that can be used to feed small animals, especially guinea pigs. These byproducts can become an alternative feed to ameliorate food deficiencies generally present in the Altiplano. This study compared the effect of consumed quinua meal rations on guinea pig body weight increase and food and economic conversion. This project was developed in two phases: pre-experimental and experimental. In the first phase, genetic material appropriate for the project and the initial rations for consumption was acquired. The second phase included the experimental design where the treatments were developed. The study …


Metabolic Profile And Nitrogen Balance In Llamas (Lama Glama) Fed With Jipi Quinua And Barley Hay, Viacha Municipality - Department Of La Paz, Meliton Ajata Avircata Jan 2006

Metabolic Profile And Nitrogen Balance In Llamas (Lama Glama) Fed With Jipi Quinua And Barley Hay, Viacha Municipality - Department Of La Paz, Meliton Ajata Avircata

Theses and Dissertations

This research was completed in Letanías, Viacha, La Paz, Bolivia, to determine the metabolic profile in blood plasma (total protein, glucose, urea, albumin, total lipids, creatinine, triglycerides, and cholesterol concentrations), live weight gain, and Nitrogen balance in adult llamas fed with 4 rations of barley and quinoa residue. Eight adult (4-5 year old) Q’ara type llamas were used in this study. Study llamas were trained to stay in metabolic cages with feces collection harnesses. Llamas were given one of the following feed rations: ration A (20% quinoa residue, 80% barley), ration B (40% quinoa residue, 60% barley), ration C (60% …


Evaluation Of Quinoa (Chenopodium Quinoa Willd) At Different Spacings Between Furrows And Plants In The Mamani Community, José Ferrufino Miranda Jan 2003

Evaluation Of Quinoa (Chenopodium Quinoa Willd) At Different Spacings Between Furrows And Plants In The Mamani Community, José Ferrufino Miranda

Theses and Dissertations

This study addressed spacing between furrows and plants in the cultivation of the quinoa variety Patacamaya. This study took place from 1999 to 2000 in the Mamani community, Ingavi, La Paz, Bolivia. The Patacamaya variety is a cross between Samaranti (sweet) and Kaslala (bitter), with a vegetative cycle of 145 days (semi-early). It has large grains, is sweet, and has a high grain yield. The spaces between furrows were 40, 60, and 80 cm in an experimental design of randomly divided plots with four repetitions. The spaces between furrows were implemented in large plots and the plant spaces as sub-treatments …


Analysis Of Genetic Variability Of Quinoa (Chenopodium Quinoa Wild.) Germ Plasm Around Lake Titicaca, Milton Víctor Pinto Porcel Jan 2002

Analysis Of Genetic Variability Of Quinoa (Chenopodium Quinoa Wild.) Germ Plasm Around Lake Titicaca, Milton Víctor Pinto Porcel

Theses and Dissertations

With the goal of analyzing the genetic variability of quinoa (Chenopodium quinoa Willd) germ plasm around Lake Titicaca, which is conserved in the National Bank of High Andean Grains of the PROINPA Altiplano Regional Foundation, the agromorphological behavior of 432 quinoa samples from the surrounding area (both Bolivian and Peruvian) were characterized and evaluated. This activity occurred at agricultural step 99/2000 of Belén Agricultural Station (16°1' South by 68°42' West), with the San Andrés Higher University Faculty of Agronomy, which because of its proximity to the lake represents climate conditions like those of the studied material's origin. In order to …