Life Sciences Commons^™

A Comprehensive Study On The Molecular Characterization Of Tomato Spotted Wilt Orthotospovirus Isolates And Resistance Genes In Pepper And Tomato, Qurat Ul Ain Sajid, Emi̇nur Elçi̇

Turkish Journal of Botany

Tomato spotted wilt orthotospovirus (TSWV, Orthotospovirus tomatomaculae) resistance genes (Tsw, Sw5) have been identified in pepper and tomato plants. The development of resistant cultivars is one of the popular management strategies for overcoming viral infections. However, the breakdown of resistance genes has been documented from many places where resistant cultivars have been developed. This has mainly been due to the emergence of resistance-breaking (RB) lines because of the consecutive use of these cultivars. The development of these isolates may cause great losses in both tomato and pepper plants in Türkiye. To investigate the incidence of TSWV, 150 symptomatic samples were …

Screening For Dmi And Mbc Fungicide Resistance In Monilinia Fructicola And Evaluation Of Biorational Products For Control Of Brown Rot On Peach In The Southeast United States, William Gura

All Theses

Monilinia fructicola (G. Winter) Honey is a fungal pathogen and is the causal agent of blossom blight, twig blight, green fruit rot, preharvest brown rot, and postharvest brown rot of peach (Prunus persica (L.) Batsch). Especially pre-and postharvest brown rot can have devastating economic impacts and negatively effects yield for peach growers throughout the southeastern United States. The most effective method for the control of pre- and postharvest brown rot is the application of synthetic fungicides during preharvest season. However, the consecutive use of fungicides with the same mode of action potentially give rise to resistance. This thesis focuses …

Study Of Population Dynamics Of Sugarcane Aphid (Melanaphis Sacchari) In Rio Grande Valley, Texas, Neetu Khanal

Theses and Dissertations

Chapter 1: This chapter incorporates detailed information about the biotype concept, aphids, their types and their biotypes, importance of studying insect biotypes and their role in mediating host plant defenses.

Chapter 2: This chapter explains in detail about the biology, biotypes, feeding behavior, damage, and economic loss caused due to sugarcane aphid infestation. This chapter further elaborates on the need for studying population level differences and justifies the objectives and significance of this research study.

Chapter 3: This chapter provides information about the comprehensive work done on three different populations of sugarcane aphid collected from three different locations in Rio …

Addressing Meloidogyne Enterolobii Spread In The Sweetpotato Industry: Development Of A High Throughput Survey Detection Method For Root-Knot Nematodes And Quantification Of M. Enterolobii Damage On Storage Roots In Long-Term Assays, Julianna Culbreath

All Theses

Meloidogyne enterolobii is an aggressive root-knot nematode (RKN) species that has emerged as a significant pathogen of sweetpotato in the Southeastern US. Meloidogyne enterolobii is spread through the movement of infected ‘seed’ sweetpotatoes used for propagation, and the RKN resistance in commercial sweetpotato cultivars has proven ineffective against this nematode. This has prompted regulatory agencies to impose quarantines on regions infected with M. enterolobii. Sweetpotato storage roots can be rendered unmarketable due to M. enterolobii infection, resulting in potential overall yield loss. Visual detection of RKN in sweetpotato can be unreliable, and further distinguishing M. enterolobii from other RKN species …

Investigation Of Basil Downy Mildew Pathogen Survival, New Pathotype Development And Sources Of Quantitative, Kelly S. Allen

Doctoral Dissertations

Basil downy mildew (BDM) caused by the oomycete pathogen Peronospora belbahrii, threatens sweet basil (Ocimum basilicum) production worldwide. Chemical and cultural control options for BDM are limited, and resistant cultivars have only recently become available for commercial production. To address this challenging agricultural disease, this research investigates BDM epidemiology, occurrences of new pathotypes, and molecular plant-pathogen interactions leading to host resistance or susceptibility. A reproducible low-resource inoculation protocol was developed to harvest P. belbahrii inoculum and propagate BDM for further research. The survival of P. belbahrii sporangia was examined using an in vitro assay to assess germination …

Compensatory Phenolic Induction Dynamics In Aspen After Aphid Infestation, Rajarshi Kumar Gaur, Ilka Nacif De Abreu, Benedicte Riber Albrectsen

Aspen Bibliography

Condensed tannins (CTs) are polyphenolics and part of the total phenolic (TP) pool that shape resistance in aspen (Populus tremula). CTs are negatively associated with pathogens, but their resistance properties against herbivores are less understood. CTs shape resistance to pathogens and chewing herbivores and could also shape resistance to aphids. Being chemical pools that are highly variable it can further be questioned whether CT-shaped resistance is better described by constitutive levels, by the induced response potential, or by both. Here, aspen genotypes were propagated and selected to represent a range of inherent abilities to produce and store foliar …

Plant Community Responses To Interactive Anthropogenic Disturbances Along A Natural-Wildland-Urban Gradient And Undergraduate Students’ Attitudes Toward Disturbances, Mali M. Hubert

Doctoral Dissertations

Anthropogenic disturbances are defined as any change caused by human activity that alters biodiversity. Wildfire and urbanization disturbances are among the most influential on the landscape because of their individual and interactive properties. Areas deemed wildland-urban interfaces (WUI; area where environment intermingles with human-built structures) are increasing near protected lands because of human population growth and movement, which often facilitates fire ignitions by humans. Houses that are adjacent to or overlap with wildland vegetation can complicate protection of urban development and wildlands from fires. The expansion of the WUI due to population growth will exacerbate fire risk, which can ultimately …

Marker-Trait Association Mapping Of Sorghum Mosaic Virus Resistance In Sugarcane, Chenie Zamora

LSU Master's Theses

Mosaic is a potentially devastating disease of sugarcane that had severe economic impact on Louisiana’s sugarcane industry in the 1920’s and has caused periodic problems ever since. The disease is vectored by migrating aphids that transmit Sugarcane mosaic virus (SCMV) and Sorghum mosaic virus (SrMV) in a non-persistent manner. Mosaic in Louisiana is currently caused by strains of SrMV. Mosaic has been controlled primarily by developing resistant cultivars. Recently, mosaic was detected in some near-commercial clones in the cultivar selection program. This prompted extensive screening of breeding program parent populations that detected infiltration of susceptibility and revealed the need for …

Confirmation And Control Of Imazamox-Resistant Shattercane, V. Kumar, R. Liu, T. L. Lambert, R. Perumal, B. Bean

Kansas Agricultural Experiment Station Research Reports

Shattercane is a summer annual grass weed species commonly found in grain sorghum producing regions, including Kansas. Recent development and commercialization of grain sorghum hybrids with tolerance to acetolactate synthase (ALS) and acetyl-CoA-carboxylase (ACCase) inhibiting herbicides will allow producers to use these herbicides for in-season control of shattercane. In a recent field survey, three shattercane populations (DC8, GH4, and PL8) collected from sorghum fields in northwestern Kansas survived the field-use rate (6 fl oz/a) of postemergence (POST) applied IMIFLEX (imazamox). The main objectives of this research were to (1) confirm and characterize the level of resistance to imazamox in those …

Genetic Resistance To The Downy Mildew Pathogen And Breeding Towards Durable Disease Management In Spinach, Bazgha Zia

Graduate Theses and Dissertations

Spinach (Spinacia oleracea) is a self-pollinated, dioecious winter crop. Prevalent challenges to the production of spinach include disease pressure imposed by downy mildew, which is caused by Peronospora effusa (=P. farinosa f. sp. spinaciae [Pfs]). A total of 19 new races of P. effusa have emerged, imposing serious challenges to the disease management in spinach production. Accordingly, this study was designed to explore the genetic components for establishing the basis of durable disease resistance development against the downy mildew pathogen (P. effusa 13) in spinach, through the use of various genome engineering approaches.

Our results have led (Chapter 2) to …

Effects Of Thinning On Dynamics And Drought Resistance Of Aspen-White Spruce Mixtures: Results From Two Study Sites In Saskatchewan, Philip G. Comeau

Aspen Bibliography

Drought stress associated with warm temperatures is causing increased mortality and reduced growth of trees in drier portions of the boreal forests of western Canada with both warming and drought expected to increase over the coming decades. While thinning is often shown to reduce drought stress, there is little information on its effects in stands comprised of mixtures of trembling aspen and white spruce that are common in the forests of this region. This study examined effects of pre-commercial thinning on aspen and spruce growth, response to drought stress, and stand dynamics for two study sites located in Saskatchewan, Canada. …

Evaluation Of Bell Pepper Cultivars With And Without Resistance To Bacterial Leaf Spot And Phytophthora, West Central Minnesota, Nathan Dalman, Steve Poppe

Midwest Vegetable Trial Reports

Bacterial leaf spot (BLS) and Phytophthora (PHY) diseases are a common problem for Minnesota bell pepper producers and if not detected and treated early enough, these diseases can kill the plants. There are cultivars that have resistance to these particular diseases but these cultivars must maintain yields similar to traditional cultivars in order to be desired by producers and buyers. Our goal was to determine any differences in performance between cultivars with and without resistance. Yield, fruit size and number of fruit per plant were the evaluated characteristics.

Resistance To Aflatoxin Accumulation In Maize Mediated By Host-Induced Gene Silencing Of Aspergillus Flavus Alkaline Protease And O-Methyltransferase-A Genes, Olanike Omotola Omolehin

LSU Doctoral Dissertations

Aspergillus flavus is a soil-borne fungal pathogen that infects maize and produces aflatoxins. In the current study, portions of the alkaline protease (alk) and the O-methyl transferase (omtA) genes, which are key in A. flavus virulence and aflatoxin biosynthesis, respectively, were targeted for suppression through an RNAi (RNA interference) approach known as Host-Induced Gene Silencing (HIGS). Separate RNAi vectors were designed to carry regions of the alk and omtA gene fragments (Alk-RNAi and OmtA-RNAi) and introduced into B104 maize zygotic embryos. Eight and six transformation events were positive for the alk and omtA transgene, respectively. …

The Trade-Off Between Uvb Sensitivity And Tolerance Against Other Stresses In African Ricespecies, Gideon Sadikiel Mmbando, Jun Hidema

Turkish Journal of Botany

Climate change and ozone depletion have caused increased ultraviolet B (UVB; 280-315nm) radiation levels on earth, which has been predicted to cause decreased growth and yield of various crops, including rice, the most important staple food worldwide. UVB radiation sensitivity varies extensively in Asian rice (Oryza sativa L.) and African rice (Oryza glaberrima Steud. and Oryza barthii A. Chev.) cultivars, and the activity of cyclobutane pyrimidine dimer (CPD) photolyase that repairs UVB-induced CPD is an essential factor underlying UVB sensitivity in rice. Unlike Asian varieties, African rice possesses different origins, and it is cultivated in the African continent under environmental …

Public Relations Of Cal Poly Avocado Rootstock Trial, Angel Daniel Carrillo

Agricultural Education and Communication

Avocados have been one of California’s specialty crops for quite some time now. The industry has been motivating growers to implement the best management practices to ensure stable and increased production as much as they possibly can. California is the leading state in the country for avocado production. In 2019, California alone produced 109 tons of avocados (US Department of Agriculture, 2020). Unfortunately, root rot has made it a challenge to do so.

Root rot is a disease derived from the Phytophthora cinnamomi pathogen. This is an issue for avocado production worldwide. In efforts to find a method of decreasing …

Mapping Quantitative Trait Loci For Peach (Prunus Persica) Resistance To Xanthomonas Arboricola Pv. Pruni (Xap) And Determining The Diversity And Virulence Of A United States Xap Collection, Maxwell Vonkreuzhof

Graduate Theses and Dissertations

Bacterial spot, caused by the bacterium Xanthomonas arboricola pv. pruni (Xap), is a threat to the peach [Prunus persica (L.) Batsch], Japanese and European plum (P. salicina L. and P. domestica L.), and tart and sweet cherry (P. cerasus L. and P. avium L.) industries. Markers for fruit resistance to bacterial spot have been developed however, markers associated with foliar resistance have yet to be developed. A total of 130 progeny and 13 parents (n=143) were evaluated for foliar and fruit Xap resistance in 2013, 2014, and 2015, and 162 progeny and eight parents (n=170) in 2017 and 2018 as …

Use Of Acetolactate Synthase-Inhibiting Herbicides In Inzen Grain Sorghum (Sorghum Bicolor L. Moench Ssp. Bicolor), Hunter Bowman

Graduate Theses and Dissertations

Grain sorghum is typically grown as a rotational crop in Arkansas because of its many benefits, one being the effective control of Palmer amaranth through the use of atrazine. However, limited options exist for postemergence (POST) control of weedy grasses within the crop. Inzen™ grain sorghum is the result of a nicosulfuron resistant weedy sorghum biotype cross-bred with a commercial line of grain sorghum. Inzen™ allows for safe use of over-the-top applications of nicosulfuron within the crop. Nicosulfuron is an acetolactate synthase (ALS)-inhibiting herbicide, which has historically been used in corn for control of weedy grasses. Experiments were conducted in …

Exploring Putative Herbicide Resistance In Two Summer Annual Grassy Weeds, Benjamin D. Pritchard

Chancellor’s Honors Program Projects

No abstract provided.

Geographic Distribution Of Bacillus Thuringiensis Cry1f Toxin Resistance In Western Bean Cutworm (Lepidoptera: Noctuidae) Populations In The United States, Brad S. Coates, Craig A. Abel, Katharine A. Swoboda-Bhattarai, Debra E. Palmquist, Débora Goulart Montezano, Sarah N. Zukoff, Yangzhou Wang, Jeffery D. Bradshaw, Christina D. Difonzo, Elson Shields, Kelley J. Tilmon, Thomas Hunt, Julie A. Peterson

West Central Research and Extension Center, North Platte

The western bean cutworm (WBC), Striacosta albicosta (Lepidoptera: Noctuidae), can be a severe pest of transgenic corn in the western Plains and Great Lakes regions of North America, including on hybrids expressing the Bacillus thuringiensis (Bt) Cry1F toxin. The level and geographic distribution of Cry1F resistance are not completely known. Neonate S. albicosta from 10 locations between Nebraska and New York state were subjected to dose–response trypsin-activated native Cry1F toxin overlay bioassays. In 2017, the mean estimated lethal concentration causing 50% larval mortality (LC50) ranged from 15.1 to 18.4 μg Cry1F cm−2, and were not significantly different among locations. In …

Phenotypic Study Of Anthracnose Resistance In Black Walnut And Building A Mapping Population, Sadie D. Land

MSU Graduate Theses

Black walnut anthracnose, caused by Gnomonia leptostyla, is the most widespread and destructive disease affecting black walnut trees (Juglans nigra). Breeding cultivars for a higher resistance to anthracnose is a natural and efficient strategy for improving the health and production quality of black walnut trees. The two goals of this study were to reveal that the ‘Sparrow’ cultivar of black walnut contains a significantly higher resistance to anthracnose than the ‘Football’ cultivar when separated from environmental factors, and to expand the ‘Football’ × ‘Sparrow’ F1 mapping population to evaluate how the trait of resistance is inherited in the progeny. A …

Control Of Protoporphyrinogen Oxidase-Resistant Palmer Amaranth, Michael Mckinley Houston

Graduate Theses and Dissertations

Already one of the most troublesome weeds in row crop production in the southern U.S., protoporphyrinogen oxidase (PPO)-resistant Palmer amaranth [Amaranthus palmeri (S.) Wats.] was first documented in Arkansas in 2015. Since this confirmation, PPO-resistant Palmer amaranth has been identified throughout the Midsouth. The following research evaluated both current and future herbicide programs for controlling PPO-resistant Palmer amaranth and quantified field-level resistance to PPO-inhibiting herbicides. On-farm research, located in fields with confirmed PPO-resistant Palmer amaranth, was conducted in 2016 and 2017. In preemergence (PRE) herbicide experiments, PPO-inhibiting herbicides still proved useful when combined with herbicides such as metribuzin and/or pyroxasulfone. …

Mapping A New Disease Resistance Locus In An F1 Progeny Derived From Two Grape Wild Relatives, Gaurab Bhattarai

MSU Graduate Theses

Linkage maps and quantitative trait loci (QTL) analysis have become essential tools for the positional cloning of agronomically important genes and for marker-assisted breeding. In this study, two North American grape species, Vitis rupestris and Vitis riparia, and their 294 F₁ progeny were used to construct parental linkage maps and to perform QTL analysis for downy mildew resistance. Single nucleotide polymorphism (SNP) discovery was accomplished using genotyping-by-sequencing (GBS) and resulted in 348,888 SNPs. Of these, 11,063 informative SNP markers (3.17% of the original SNP dataset) were derived after filtering for various quality parameters and missing data. A two-way …

Response Of Sorghum Enhanced In Monolignol Biosynthesis To Stalk Rot Pathogens, Deanna L. Funnell-Harris, Scott E. Sattler, Patrick M. O'Neill, Tammy Gries, Hannah M. Tetreault, Thomas E. Clemente

Department of Plant Pathology: Faculty Publications

To increase phenylpropanoid constituents and energy content in the versatile C4 grass sorghum (Sorghum bicolor [L.] Moench), sorghum genes for protiens related to monolignol biosynthesis were overexpressed: SbMyb60 (transcriptional activator), SbPAL (phenylalanine ammonia ase), Bmr2 (4-coumarate: CoA ligase), and SbC3H (coumaroyl shikimate 3-hydroxylase). Overexpression lines were evaluted for responses to stalk pahtogens under greenhouse and field conditions. Greenhouse-grown plants were inoculated with Fusarium thapsinum (Fusarium stalk rot) and Macrophomia phaseolina (charocal rot), which cause yield-reducing diseases. F. thapsinum-inoculated overexpression plants had mean lesion lengths not significantly different than wild-type, except for significantly smaller lesions on two of three SbMyb60 and …

Genetic Regulation Of The Elicitation Of Glyceollin Biosynthesis In Soybean, Md. Asraful Jahan

Graduate Theses, Dissertations, and Problem Reports

Glyceollin phytoalexins are the pathogen-elicited defense metabolites that belong to the isoflavonoid family of molecules of soybean (Glycine max L. Merr). Phytophthora root and stem rot of soybean caused by Phytophthora sojae is a destructive disease throughout the soybean-growing regions worldwide causing devastating economic damages (globally $1-2 billion and over $250 million in the USA) every year. Engineering soybean plants that produce higher levels of glyceollins could confer resistance against this pathogen. Glyceollins also show anticancer and neuroprotective activities in mammals, therefore they are important for agriculture and medical research. Firstly, we were interested in understanding how biotic and …

Molecular Basis Of Pathogenesis And Host Determination In Cercospora Sojina: From Phenotypic To Genotypic Patterns, Wagner Calegari Fagundes

Graduate Theses and Dissertations

Frogeye leaf spot (FLS), caused by Cercospora sojina, is an important and recurrent disease of soybean in many production regions. Genetic resistance is potentially one of the most cost-effective and sustainable strategies to control FLS. However, C. sojina has already demonstrated the ability to overcome resistance conveyed by single R-genes (resistance genes) of soybeans, followed by the emergence of new physiological races. Although understanding population genomics and the virulence gene inventories in fungal plant pathogens is extremely important to improve disease control measures, studies regarding host specificity and pathogenesis in C. sojina are very limited. Therefore, the overarching goal of …

Epidemiological Studies Of Soybean Vein Necrosis Virus And Potential Resistance Mechanisms To Its Vector Neohydatothrips Variabilis (Beach), Jing Zhou

Graduate Theses and Dissertations

Soybean (Glycine max (L.) Merrill) is one the most important crops in global agriculture with annual production of over 260 million metric tons. As the dependence of a growing global population to soybean has increased, so does the importance of soybean diseases and pests. Over 200 pathogens attack soybean; among them, viruses pose a major threat to the soybean industries accounting for approximately 10% of the annual yield reduction caused by diseases in the past two decades. Soybean vein necrosis virus (SVNV) is a relatively newly discovered virus causing the homonymous disease. The widespread occurrence of the disease in major …

Double-Stranded Rna Binding Protein, Staufen, Is Required For The Initiation Of Rnai In Coleopteran Insects, June-Sun Yoon, Kanakachari Mogilicherla, Dhandapani Gurusamy, Xien Chen, Shankar C. R. R. Chereddy, Subba R. Palli

Entomology Faculty Publications

RNA interference (RNAi) is being used to develop methods to control pests and disease vectors. RNAi is robust and systemic in coleopteran insects but is quite variable in other insects. The determinants of efficient RNAi in coleopterans, as well as its potential mechanisms of resistance, are not known. RNAi screen identified a double-stranded RNA binding protein (StaufenC) as a major player in RNAi. StaufenC homologs have been identified in only coleopteran insects. Experiments in two coleopteran insects, Leptinotarsa decemlineata and Tribolium castaneum, showed the requirement of StaufenC for RNAi, especially for processing of double-stranded RNA (dsRNA) to small interfering …

Variability, Inheritance Of Fiber Length In 4-5 Specific And Backcross Hybrids, Tolerance Of Cotton Hybrids To Bollworm In Depending Of The Level Of Gossypol, Sayfulla Boboyev, Fakhriddin Kushanov, Ikrom Amanturdiev, Gulnoza Akhmedjanova

Bulletin of National University of Uzbekistan: Mathematics and Natural Sciences

In this paper presents data of researches about fiber length in the 4-5 species. The largest number of plants with the indicated analyzed trait in hybrid combinations, obtained with the participation of the Omad variety, appeared with a number of variations in fiber length at 35.0-36.0 mm and above. Investigation of 4-species hybrids of F2 and back cross hybridization allowed some improvement in the average value of trait when compared with F1. Despite the emergence of transgressive plants with fiber length 36.1-37.0 mm and above, the average trait of composite 5 species hybrids F2 remained almost at the level of …

Genetic And Phytopathological Studies On Charcoal Rot Resistance In Soybean [Glycine Max (L) Merr.], Marcos Paulo Da Silva

Graduate Theses and Dissertations

Charcoal rot of soybean (Glycine max (L.), caused by Macrophomina phaseolina is a disease of economic significance in the United States. The identification and quantification of the resistance is difficult, and very little is known about the genetics and markers linked to the charcoal rot (CR) resistance genes. Current assay methods can be time consuming, and data may vary between tests. The objectives of this study were to 1) create a robust seed plate assay (SPA) for CR resistance by comparing results with cut-stem and CFUI assays; 2) correlate and compare field data disease assessments with SPA; 3) identify QTLs …

Breeding For Resistance In California Strawberry To Verticillium Dahliae, Zachary Christman

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

This article focuses on breeding resistant strawberries to the fungus Verticillium dahliae, common name Verticillium wilt. This is a serious fungal disease that can result in a loss of 50% or more of a strawberry harvest when grown in infested soil. The main goal is to provide an example of how a cultivar can be made more resistant to a plant pathogen with the use of plant breeding methods.

Since 1930 the University of California, Davis, has been developing strawberry cultivars that are adapted to the agricultural industry and regional farms. Developing cultivars that require fewer inputs are of …