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An Ecological Perspective Of American Rodent-Borne Orthohantavirus Surveillance, Nathaniel Mull May 2023

An Ecological Perspective Of American Rodent-Borne Orthohantavirus Surveillance, Nathaniel Mull

Graduate Theses and Dissertations

Orthohantaviruses are a global group of viruses found primarily in rodents, though several viruses have also been found in shrews and moles. Many rodent-borne orthohantaviruses are capable of causing one of several diseases in humans, and the mortality associated with these diseases ranges from < 0.1% - 50% depending on the specific etiological virus. In North and South America, orthohantavirus research was ignited by an outbreak of severe disease in the Four Corners region of the United States in 1993. However, despite the discovery of over 20 orthohantaviruses in the Americas, our understanding of orthohantavirus ecology and virus-host dynamics in this region is still limited, and orthohantavirus surveillance is generally restricted in scope to select regions and small portions of host distributional ranges. In Chapter I, I present a literature review on the current understanding of American rodent-borne orthohantavirus ecology. This review focused on under-studied orthohantaviruses, addressing gaps in knowledge by extrapolating information from well-studied orthohantaviruses, general rodent ecology, and occassionally from Eurasian orthohantavirus-host ecology. There were several key conclusions generated from this review that warrant further research: 1) the large number of putative orthohantaviruses and gaps in orthohantavirus evolution necessitate further surveillance and characterization, 2) orthohantavirus traits differ and are more generalizable based on host taxonomy rather than geography, and 3) orthohantavirus host species are disproportionately found in grasslands and disturbed habitats. In Chapter II, I present a prioritized list of rodent species to target for orthohantavirus surveillance based on predictive modeling using machine learning. Probable orthohantavirus hosts were predicted based on traits of known orthohantavirus hosts using two different types of evidence: RT-PCR and virus isolation. Predicted host distributions were also mapped to identify geographic hotspots to spatially guide future surveillance efforts. In Chapter III, I present a framework for understanding and predicting orthohantavirus traits based on reservoir host phylogeny, as opposed to the traditional geographic dichotomy used to group orthohantaviruses. This framework establishes three distinct orthohantavirus groups: murid-borne orthohantaviruses, arvicoline-borne orthohantaviruses, and non-arvicoline cricetid-borne orthohantaviruses, which differ in several key traits, including the human disease they cause, transmission routes, and virus-host fidelity. In Chapter IV, I compare rodent communities and orthohantavirus prevalence among grassland management regimes. Sites that were periodically burned had high rodent diversity and a high proportion of grassland species. However, rodent seroprevalence for orthohantavirus was also highest in burned sites, representing a trade-off in habitat management outcomes. The high seroprevalence in burned sites is likely due to the robust populations supported by the high quality habitat resulting from prescribed burning. In Chapters V and VI, I describe Ozark virus and Sager Creek virus, two novel orthohantaviruses discovered from specimens collected during Chapter IV. Both chapters report full genome sequences of the respective viruses and compare both nucleotide and protein phylogenies with related orthohantaviruses. Additionally in Chapter VI, I support the genetic analyses with molecular and ecological characterizations, including seasonal fluctuations in host abundance, correlates of prevalence, evidence of virus shedding, and information on host cell susceptibility to Sager Creek virus.


Exploring A Potential Bias In Detection Of Mesopredators By Cameras, Rylee Gibson May 2023

Exploring A Potential Bias In Detection Of Mesopredators By Cameras, Rylee Gibson

Biological Sciences Undergraduate Honors Theses

Mesopredators, such as the raccoon (Procyon locor), Virginia opossum (Didpelphis virginiana), and striped skunk (Mephitis mephitis) play crucial ecological roles as predators, prey, and disease vectors across much of the United States. Because of their importance and the way that populations of these mesopredators can dramatically increase due to human-subsidized resources, it is imperative that studies attempting to quantify mesopredator community composition are accurate and unbiased. However, it has recently been suggested that not all mammals trigger motion-activated wildlife game cameras at the same rate and for some species detection probability may be biased. My goals for this thesis were …


Life After Death – Does Carcass Biodiversity Scale With Carcass Body Size?, Troy Warfield May 2022

Life After Death – Does Carcass Biodiversity Scale With Carcass Body Size?, Troy Warfield

Biological Sciences Undergraduate Honors Theses

Mammals play a large role in the ecosystems where some, especially large-bodied mammals, act as ecosystem engineers. Mammal carcasses, particularly those of large body mass act as a temporary island of dense nutrients that support other organisms, including other mammal species, for an extended period. Research in this field currently focuses on the link between mammal carcass size and nutrient availably or on non-mammalian size and biodiversity, but little is available on the correlation between mammal carcass size and its influence on ecosystem biodiversity. Here we ask, does the available biomass (i.e., body size) of the carcass affect its role …


Seasonality Of Orthohantavirus Seroprevalence In Northwest Arkansas Rodents, Amy Schexnayder May 2022

Seasonality Of Orthohantavirus Seroprevalence In Northwest Arkansas Rodents, Amy Schexnayder

Biological Sciences Undergraduate Honors Theses

Zoonotic viruses are viruses that can be transmitted from animals to humans. Rodent species are likely to be reservoirs for zoonotic viruses, and particular rodent-borne viruses, such as orthohantaviruses, may greatly threaten human health. Orthohantaviruses are a group of rodent-borne viruses that are at risk for spillover to human populations. Many aspects of orthohantaviruses have been well-researched, yet the seasonality of orthohantaviruses has not yet been thoroughly examined, especially in the southern United States. In this study, we captured 616 rodents trapped over 5953 trap nights across 13 grassland sites in Northwest Arkansas. Rodents were trapped for two consecutive nights …


Sublethal Effects Of Red Imported Fire Ant Envenomation On Hatchlings Of North American Oviparous Snakes, Hannah Warner, Meredith Swartwout May 2021

Sublethal Effects Of Red Imported Fire Ant Envenomation On Hatchlings Of North American Oviparous Snakes, Hannah Warner, Meredith Swartwout

Crop, Soil and Environmental Sciences Undergraduate Honors Theses

Invasive species cause major ecological and economic damage. The Red Imported Fire Ant (RIFA; Solenopsis invicta) has successfully invaded much of the southeastern United States and has caused both widespread economic damage and is suspected to be the driver of enigmatic declines of several oviparous snake species. This study aimed to determine the sublethal effects of RIFA on hatchlings of six species of oviparous snakes (Coluber constrictor, Lampropeltis calligaster, L. holbrooki, Opheodrys aestivus, Pantherophis emoryi, and P. obsoletus) by exposing hatchlings to envenomation by RIFA and then measuring two performance metrics: righting response and …


Examining The Invasion Of A Bush Honeysuckle Using Climate Analysis, Andrew Palmer May 2021

Examining The Invasion Of A Bush Honeysuckle Using Climate Analysis, Andrew Palmer

Biological Sciences Undergraduate Honors Theses

Within the study of invasive plants, particular importance is placed on elucidating the mechanisms by which these plants proliferate and dominate within their introduced ranges. Several theories have been advanced to explain these invasions, each with different implications for the predicted range of invasive plants. Recent studies have provided support for the application of several invasion theories to Lonicera maackii, or what is more commonly referred to as bush honeysuckle. This species provides a unique opportunity to examine the efficacy of these theories in explaining the range expansion of invasive plants. L. maackii is endemic to eastern Asia, but …


Distribution And Reproduction By The Purple Gallinule (Porphyrio Martinica) In Arkansas, C. Renn Tumlison, Terry L. Tumlison, Tamzen T. Bryant Jan 2020

Distribution And Reproduction By The Purple Gallinule (Porphyrio Martinica) In Arkansas, C. Renn Tumlison, Terry L. Tumlison, Tamzen T. Bryant

Journal of the Arkansas Academy of Science

The Purple Gallinule (Porphyrio martinica) is a rare bird in Arkansas, and its populations likely have declined due to loss of marshy areas with emergent vegetation. By use of online sources for citizen science combined with a field study, we elucidate the current distribution of this bird in Arkansas, and document characteristics of reproduction and development. Purple Gallinules arrive in Arkansas as early as April and remain to late October. Nesting occurs from early May into July, and nests may represent second broods. Ontogenetic changes in hatchlings are described.


The Impact Of Prescribed Fire On Moth Assemblages In The Boston Mountains And Ozark Highlands, In Arkansas, Erin E. Guerra, Cristina M. Blanco, Jorista Garrie Jan 2019

The Impact Of Prescribed Fire On Moth Assemblages In The Boston Mountains And Ozark Highlands, In Arkansas, Erin E. Guerra, Cristina M. Blanco, Jorista Garrie

Journal of the Arkansas Academy of Science

In addition to the impacts of prescribed fires on forest vegetation, this ecosystem process also has dramatic impacts on associated insect assemblages. For herbivorous, terrestrial insects, fire predictably results in a cycle of initial insect population reduction followed by recovery and growth, in which these insect populations exceed pre-fire abundances. We sought to examine if fire-induced disturbance cycles make prescribed burned areas more or less suitable specifically for moths (order Lepidoptera), which is a major food source for, among others, multiple bat species. We surveyed moth assemblages at 20 burned and 20 unburned sites in the Boston Mountain and Ozark …


Bat Occupancy Estimates And Species Richness At Cache River National Wildlife Refuge, Samuel Schratz, Virginie Rolland, Jason Phillips, Richard Crossett, David Richardson, Thomas S. Risch Jan 2017

Bat Occupancy Estimates And Species Richness At Cache River National Wildlife Refuge, Samuel Schratz, Virginie Rolland, Jason Phillips, Richard Crossett, David Richardson, Thomas S. Risch

Journal of the Arkansas Academy of Science

Six bat species of special concern, threatened or endangered, may occur in one of Arkansas’ largest bottomland hardwood forests, the Cache River National Wildlife Refuge (CRNWR). However, inventory of bat species throughout the refuge has been lacking and management plans may not be adequate in promoting bat conservation. The objectives of this study were to inventory bat species in the CRNWR, and determine bat-habitat associations via occupancy estimates. From May–August 2014 and 2015, we mist-netted from sunset for 5 hours. We also deployed bioacoustic devices throughout 5 habitat types (cypress-tupelo [dominantly Taxodium distichum and Nyssa aquatica], emergent wetland, mature …


How Do Designers Of The Built Environment Attempt To Make Ecological Sustainability Sensory Legible?, Carly L. Bartow Dec 2016

How Do Designers Of The Built Environment Attempt To Make Ecological Sustainability Sensory Legible?, Carly L. Bartow

Architecture Undergraduate Honors Theses

This paper attempts to provide a theoretical framework for making ecosystem function and ecologically sustainable design more perceptible or sensible to people through architecture and the built environment. Design features of the Bertschi School Science Wing and the Bullitt Center in Seattle, Washington are incorporated to illustrate the sensory legibility of ecological sustainability criteria.The criteria are available to designers to help educate a building's occupants on environmentally sustainable design and motivate more sustainable behavior.


[Re]Visiting The Rime: A Case Study Of Adaptation As Process And Product With The Rime Of The Ancient Mariner, Sally Ferguson May 2016

[Re]Visiting The Rime: A Case Study Of Adaptation As Process And Product With The Rime Of The Ancient Mariner, Sally Ferguson

Graduate Theses and Dissertations

This thesis combines adaptation theory with ecology to examine Samuel Taylor Coleridge's Rime of the Ancient Mariner (1798) and its adaptations; it argues further combinations of adaptation with evolutionary theory and ecological ideas could allow for a better interpretation of many texts. The adaptation Rime of the Modern Mariner (2011) by Nick Hayes and the appropriation Perelandra (1943) by C.S. Lewis will also be present in individual chapters to examine the texts' interactions with each other as they evolve and how each work represents the combined theory.


Estimating The Frequency Of Sexual Reproduction In The Diatom Stephanodiscus Niagarae, Ann W. Dickens May 2016

Estimating The Frequency Of Sexual Reproduction In The Diatom Stephanodiscus Niagarae, Ann W. Dickens

Biological Sciences Undergraduate Honors Theses

Diatoms are single-celled micro-algae with cell walls composed of silica, that reproduce in a way that results in a decrease in cell size after each round of mitotic (asexual) division. A cell cannot continue to shrink indefinitely, so when the average size of the population reaches a critical threshold, diatoms reproduce sexually and restore their maximal size. It is unclear, however, how frequently diatoms undergo sexual reproduction in nature. As a proxy for sexual reproduction, I monitored changes in cell size of a population of the diatom Stephanodiscus niagarae from the plankton community of Lake Fayetteville (Arkansas, USA). Weekly sampling …


Letter From The Dean, Lalit Verma Jan 2009

Letter From The Dean, Lalit Verma

Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences

No abstract provided.


Organochlorine Pesticide Concentrations In Various Species Of Migratory Passerines In Louisiana, Ragupathy Kannan Jan 1991

Organochlorine Pesticide Concentrations In Various Species Of Migratory Passerines In Louisiana, Ragupathy Kannan

Journal of the Arkansas Academy of Science

Twenty-four specimens of southbound migratory passerines comprising 13 species were collected in northeastern Louisiana during 1986, and were subjected to gas-chromatography analyses for organochlorine pesticide compounds. Eleven of the specimens analyzed (46%) were positive for pesticides. The compounds detected were in trace amounts ranging from 1.37 to 200.14 ppb. The data indicated a further decline in pesticide burdens in birds since the ban on DDT. It also supported the hypothesis that a post-mortem breakdown of DDT to DDE may occur in avian tissues. Itis hypothesized that northbound migrants may have higher pesticide burdens than fall migrants considering the continued usage …


Fluctuations And Relationships Of Selected Physiochemical Parameters In Dardanelle Reservoir, Arkansas, 1975-1982, John D. Rickett, Robert L. Watson Jan 1985

Fluctuations And Relationships Of Selected Physiochemical Parameters In Dardanelle Reservoir, Arkansas, 1975-1982, John D. Rickett, Robert L. Watson

Journal of the Arkansas Academy of Science

Annual and seasonal fluctuations and relationships are described for discharge, turbidity, chloride, total hardness, conductivity and suspended solids over an eight-year period in Dardanelle Reservoir. The parameters fluctuated rather widely primarily in response to seasonal patterns of rainfall. Chloride and conductivity were related and generally fluctuated together as did turbidity and suspended solids. Hardness appeared to vary independently of the others prior to 1979 then varied more closely with chloride after March 1979. Inherent differences between the Illinois Bayou arm and the main Arkansas River sections complicated the precise identification of any overall impact of power plant operation. No significant …