Life Sciences Commons^™

Dataset: Ribbed Mussel Carbon And Nitrogen Composition Data, Robert Isdell, Ashley Rose, Donna Marie Bilkovic, Randolph Chambers

Data

Ribbed mussel (Geukensia demissa) C:N ratios for tissue and shell samples are provided from a marsh in Virginia

Levels Of Autotrophy And Heterotrophy In Mesophotic Corals Near The End Photic Zone, Amy Carmignani, Veronica Z. Radice, Kathryn M. Mcmahon, Alex I. Holman, Karen Miller, Kliti Grice, Zoe Richards

Biological Sciences Faculty Publications

Mesophotic corals live at ~30-150 m depth and can sustain metabolic processes under light-limited conditions by enhancing autotrophy through specialized photoadaptations or increasing heterotrophic nutrient acquisition. These acclimatory processes are often species-specific, however mesophotic ecosystems are largely unexplored and acclimation limits for most species are unknown. This study examined mesophotic coral ecosystems using a remotely operated vehicle (Ashmore Reef, Western Australia at 40–75m depth) to investigate the trophic ecology of five species of scleractinian coral (from genera Leptoseris, Pachyseris, and Craterastrea) using stable isotope analyses (δ¹³C and δ¹⁵N) of host and symbiont tissues …

Potential Interactions Between Diatoms And Bacteria Are Shaped By Trace Element Gradients In The Southern Ocean, Alexa R. Sterling, Laura Z. Holland, Randelle M. Bundy, Shannon M. Burns, Kristen N. Buck, P. Dreux Chappell, Bethany D. Jenkins

OES Faculty Publications

The growth of diatoms in the Southern Ocean, especially the region surrounding the West Antarctic Peninsula, is frequently constrained by low dissolved iron and other trace metal concentrations. This challenge may be overcome by mutualisms between diatoms and co-occurring associated bacteria, in which diatoms produce organic carbon as a substrate for bacterial growth, and bacteria produce siderophores, metal-binding ligands that can supply diatoms with metals upon uptake as well as other useful secondary compounds for diatom growth like vitamins. To examine the relationships between diatoms and bacteria in the plankton (diatom) size class (> 3 mu m), we sampled both …

Geomorphic Gradients In Shallow Seagrass Carbon Stocks, Jahson Berhane Alemu, Siti Maryam Yaakub, Erik S. Yando, Rachel Yu San Lau, Cheng Chang Lim, Jun Yu Puah, Daniel A. Friess

Biological Sciences Faculty Publications

Seagrass meadows are important sinks of organic carbon (C_org), in particular the near-surface C_org pool (≤ 15 cm) compared to deeper sediments. Near-surface carbon is highly susceptible to disturbance and loss to the atmosphere, however, inadequate accounting for variability in this pool of carbon limits their uptake into carbon accounting frameworks. We therefore investigated the spatial variability in seagrass near-surface C_org and biomass C_org across different geomorphic (estuary, lagoonal and reef-associated) and community typologies (pioneer and persistent). Near-surface C_org stock in vegetated areas (25.78 Mg C_org ha⁻¹ ± 26.64) was twice that …

Examining Ecological Succession Of Diatoms In California Current System Cyclonic Mesoscale Eddies, Zuzanna M. Abdala, Sophie Clayton, Sveinn V. Einarsson, Kimberly Powell, Claire P. Till, Tyler H. Coale, P. Dreux Chappell

OES Faculty Publications

The California Current System is a diatom-dominated region characterized by seasonal coastal upwelling and additional elevated mesoscale activity. Cyclonic mesoscale eddies in the region trap productive coastal waters with their planktonic communities and transport them offshore with limited interaction with surrounding waters, effectively acting as natural mesocosms, where phytoplankton populations undergo ecological succession as eddies age. This study examines diatom community composition within two mesoscale cyclonic eddies that formed in the same region of the California Current System 2 months apart and in the California Current waters surrounding them. The diatom communities were analyzed in the context of shifting environmental …

Characterizations Of Dissolved Organic Carbon At Hydrothermal Systems Of The Midcayman Rise, Aaron Mau

Theses and Dissertations

Marine dissolved organic carbon (DOC) is a carbon reservoir comparable in size to all atmospheric CO2 and is composed primarily of refractory material which can be thousands of years old. Circulation through hydrothermal systems has been demonstrated to profoundly alter this material, but the mechanisms that lead to addition, removal, and alteration of DOC are poorly understood. Consequently, the contribution of hydrothermal systems to organic carbon cycling in the deep ocean – and the biological and geochemical processes exhibited at different venting environments – remain highly uncertain.

In January 2020, samples were collected from two hydrothermal vent fields at the …

Stable Isotopes Used To Infer Trophic Position Of Green Turtles (Chelonia Mydas) From Dry Tortugas National Park, Gulf Of Mexico, United States, David C. Roche, Michael S. Cherkiss, Brian J. Smith, Derek A. Burkholder, Kristen M. Hart

Marine & Environmental Sciences Faculty Articles

Evaluating resource use patterns for imperiled species is critical for understanding what supports their populations. Here we established stable isotope (δ¹³C, δ¹⁵N) values for the endangered green sea turtle (Chelonia mydas) population found within the boundaries of Dry Tortugas National Park (DRTO), south Florida, USA. There is little gene flow between turtles sampled at DRTO and in other rookeries in Florida, underscoring the need to study this distinct population. Between 2008 and 2015 we collected multiple sample types (skin [homogenized epidermis/dermis], whole blood, red blood cells, plasma, carapace) from 151 unique green turtles, including …

Spatial And Temporal Variation In The Diet Composition Of Zooplankton In Mission Bay, Bryanna Paulson

Theses

Analyses of quantitative data on zooplankton diets are vital for understanding the drivers of zooplankton abundance within an ecosystem. Such analyses also provide insight into trophic pathways within the lower planktonic food web, which support populations of higher trophic level species. This study used carbon and nitrogen stable isotope ratios of size-fractionated plankton in Mission Bay, San Diego, CA to examine the spatial and temporal variation in zooplankton trophic ecology and determine potential environmental drivers of zooplankton community structure. Carbon stable isotopes reflect primary production sources in an organism’s diet, and nitrogen stable isotope ratios can be used to estimate …

Role Of Carbonate Burial In Blue Carbon Budgets, V. Saderne, N.R. Geraldi, P.I. Macreadie, D.T. Maher, J.J. Middelburg, O. Serrano, H. Almahasheer, A. Arias-Ortiz, M. Cusack, B.D. Eyre, J.W. Fourqurean, H. Kennedy, D. Krause-Jensen, T. Kuwae, P.S. Lavery, C.E. Lovelock, N. Marba, P. Masqué, M.A. Mateo, I. Mazarrasa, K.J. Mcglathery, M.P.J. Oreska, C.J. Sanders, I.R. Santos

Research outputs 2014 to 2021

Calcium carbonates (CaCO 3 ) often accumulate in mangrove and seagrass sediments. As CaCO 3 production emits CO 2 , there is concern that this may partially offset the role of Blue Carbon ecosystems as CO 2 sinks through the burial of organic carbon (C org ). A global collection of data on inorganic carbon burial rates (C inorg , 12% of CaCO 3 mass) revealed global rates of 0.8 TgC inorg yr −1 and 15–62 TgC inorg yr −1 in mangrove and seagrass ecosystems, respectively. In seagrass, CaCO 3 burial may correspond to an offset of 30% of the …

Seagrass Removal Leads To Rapid Changes In Fauna And Loss Of Carbon, Michael N. Githaiga, Anna M. Frouws, James G. Kairo, Mark Huxham

Research outputs 2014 to 2021

Seagrass habitats are important natural carbon sinks, with an average of ~14 kg C m⁻² buried in their sediments. The fate of this carbon following seagrass removal or damage has major environmental implications but is poorly understood. Using a removal experiment lasting 18 months at Gazi Bay, Kenya, we investigated the impacts of seagrass loss on sediment topography, hydrodynamics, faunal community structure and carbon dynamics. Sediment pins were used to monitor surface elevation. The effects of seagrass removal on water velocity was investigated using Plaster of Paris dissolution. Sediment carbon concentration was measured at the surface and down to …

Climate And Plant Controls On Soil Organic Matter In Coastal Wetlands, Michael J. Osland, Christopher A. Gabler, James B. Grace, Richard H. Day, Meagan L. Mccoy, Jennie L. Mcleod, Andrew S. From, Nicholas M. Enwright, Laura C. Feher, Camille L. Stagg

School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations

Coastal wetlands are among the most productive and carbon‐rich ecosystems on Earth. Long‐term carbon storage in coastal wetlands occurs primarily belowground as soil organic matter (SOM). In addition to serving as a carbon sink, SOM influences wetland ecosystem structure, function, and stability. To anticipate and mitigate the effects of climate change, there is a need to advance understanding of environmental controls on wetland SOM. Here, we investigated the influence of four soil formation factors: climate, biota, parent materials, and topography. Along the northern Gulf of Mexico, we collected wetland plant and soil data across elevation and zonation gradients within 10 …

Influence Of Energy Availability On The Carbon Isotopes Of Methane And Biomarkers During Hydrogenotrophic Methanogenesis, Tran Nguyen

Theses and Dissertations

Signatures of organic molecules in the environment are widely used to identify microbial metabolic processes and to track the cycling of carbon. The lipid biomarkers of methane cycling archaea are of particular interest as they are unique, preserved over geologic time scales, and reflect processes that impact an important greenhouse gas. Their isotopic compositions have been used to distinguish regions where archaea produce and anaerobically consume CH4. Previous work has demonstrated that energy availability impacts the stable carbon isotopes of CH4 during microbial synthesis from H2 and CO2. Here, we investigated whether this relationship could be extended to lipids and …

Composition Of Dissolved Organic Matter In Pore Waters Of Anoxic Marine Sediments Analyzed By 1h Nuclear Magnetic Resonance Spectroscopy, Christina A. Fox, Hussain A. Abdulla, David J. Burdige, James P. Lewicki, Tomoko Komada

OES Faculty Publications

Marine sediments are globally significant sources of dissolved organic matter (DOM) to the oceans, but the biogeochemical role of pore-water DOM in the benthic and marine carbon cycles remains unclear due to a lack of understanding about the molecular composition of DOM. To help fill this knowledge gap, we used 1H nuclear magnetic resonance (NMR) spectroscopy to examine depth variability in the composition of pore-water DOM in anoxic sediments of Santa Barbara Basin, California Borderland. Proton detected spectra were acquired on whole samples without pre-concentration to avoid preclusion of any DOM components from the analytical window. Broad unresolved resonance (operationally …

Nutrient And Phytoplankton Dynamics On The Inner Shelf Of The Eastern Bering Sea, Calvin W. Mordy, Allan H. (Allan Houston) Devol, Lisa B. Eisner, Nancy Kachel, Carol A. Ladd, Michael W. Lomas, Peter Proctor, Raymond Nicholas Sambrotto, David Shull, Phyllis Jean Stabeno, Eric Wisegarver

Environmental Sciences Faculty and Staff Publications

In the Bering Sea, the nitrogen cycle near Nunivak Island is complicated due to limited nutrient replenishment across this broad shelf, and substantial nitrogen loss through sedimentary processes. While diffusion at the inner front may periodically support new production, the inner shelf in this region is generally described as a regenerative system. This study combines hydrographic surveys with measurements of nitrogen assimilation and benthic fluxes to examine nitrogen cycling on the inner shelf, and connectivity between the middle and inner shelves of the southern and central Bering Sea. Results establish the inner shelf as primarily a regenerative system even in …

Carbon Sequestration By Australian Tidal Marshes, Peter I. Macreadie, Q. R. Oliver, J. J. Kelleway, Oscar Serrano, P. E. Carnell, C. J. Ewers Lewis, T. B. Atwood, J. Sanderman, J. Baldock, R. M. Connolly, C. M. Duarte, Paul Lavery, A. Steven, C. E, Lovelock

Research outputs 2014 to 2021

Australia’s tidal marshes have suffered significant losses but their recently recognised importance in CO2 sequestration is creating opportunities for their protection and restoration. We compiled all available data on soil organic carbon (OC) storage in Australia’s tidal marshes (323 cores). OC stocks in the surface 1 m averaged 165.41 (SE 6.96) Mg OC ha − 1 (range 14 – 963 Mg OC ha − 1). The mean OC accumulation rate was 0.55 ± 0.02 Mg OC ha − 1 yr − 1. Geomorphology was the most important predictor of OC stocks, with fluvial sites having twice the stock of OC …

The Growth Response Of Two Diatom Species To Atmospheric Dust From The Last Glacial Maximum, Tim M. Conway, Linn J. Hoffmann, Eike Breitbarth, Robert F. Strzepek, Eric W. Wolff

Marine Science Faculty Publications

Relief of iron (Fe) limitation in the surface Southern Ocean has been suggested as one driver of the regular glacial-interglacial cycles in atmospheric carbon dioxide (CO2). The proposed cause is enhanced deposition of Fe-bearing atmospheric dust to the oceans during glacial intervals, with consequent effects on export production and the carbon cycle. However, understanding the role of enhanced atmospheric Fe supply in biogeochemical cycles is limited by knowledge of the fluxes and 'bioavailability' of atmospheric Fe during glacial intervals. Here, we assess the effect of Fe fertilization by dust, dry-extracted from the Last Glacial Maximum portion of the EPICA Dome …

Hydrocarbons In Deep-Sea Sediments Following The 2010 Deepwater Horizon Blowout In The Northeast Gulf Of Mexico, Isabel C. Romero, Patrick Schwing, Gregg R Brooks, Rebekka A Larson, David W. Hastings, Greg Ellis, Ethan Goddard, David Hollander

Marine Science Faculty Publications

The Deepwater Horizon (DWH) spill released 4.9 million barrels of oil into the Gulf of Mexico (GoM) over 87 days. Sediment and water sampling efforts were concentrated SW of the DWH and in coastal areas. Here we present geochemistry data from sediment cores collected in the aftermath of the DWH event from 1000-1500 m water depth in the DeSoto Canyon, NE of the DWH wellhead. Cores were analyzed at high-resolution (at 2 mm and 5 mm intervals) in order to evaluate the concentration, composition and input of hydrocarbons to the seafloor. Specifically, we analyzed total organic carbon (TOC), aliphatic, polycyclic …

Grazing Impacts Of Diverse Zooplankton Taxa On Thin Layers, Alexander Bochdansky

OES Faculty Publications

The US Navy needs to know how distributions and abundances of light-scattering and sound-scattering organisms in the ocean vary in space and time, particularly in the vertical dimension. Recent field observations have shown that many biological properties may vary substantially over small e.g. centimeter scales, commonly referred to as thin layers e.g. Cowles et al. 1998, 1999, Hanson Donaghay 1998, Holliday et al. 1999, Dekshenieks et al. 2001, Alldredge et al. 2002, Rines et al. 2002. Our previous ONR-funded research has allowed us to begin to understand how zooplankton interact with thin layers and how they can take advantage of …

Effects Of Salinity Changes On The Photodegradation And Ultraviolet-Visible Absorbance Of Terrestrial Dissolved Organic Matter, E. C. Minor, J. Pothen, B. J. Dalzell, H. Abdulla, K. Mopper

Chemistry & Biochemistry Faculty Publications

We performed laboratory studies to determine the effects of salinity on the photodegradation of dissolved organic matter (DOM) from the Great Dismal Swamp, Virginia, an important source of terrestrial DOM to the lower Chesapeake Bay. Samples were created by mixing Great Dismal Swamp water (ionic strength approximate to 0 mol L^-1) with modified artificial seawater solutions of differing salinities while keeping the final dissolved organic carbon (DOC) concentration constant. These samples were then irradiated for 24 h in a light box providing ultraviolet (UV) light similar to that of natural sunlight. Light absorbance and DOC concentrations decreased after …

Top-Down Impact Through A Bottom-Up Mechanism. In Situ Effects Of Limpet Grazing On Growth, Light Requirements And Survival Of The Eelgrass Zostera Marina, Richard C. Zimmerman, Diana L. Steller, Donald G. Kohrs, Randall S. Alberte

OES Faculty Publications

Temporal changes in abundance, size, productivity, resource allocation and light requirements of a subtidal eelgrass (Zostera marina L.) population were followed for 2 yr after the September 1993 appearance of a previously rare oval form of the commensal limpet Tectura depicta (Berry) in Monterey Bay, California, USA, By exclusively targeting the epidermis, limpet grazing impaired photosynthetic performance but left respiratory demand, meristematic growth and more than 90 % of the leaf biomass intact, The resulting low P:R ratios of grazed plants raised the light requirements for the maintenance of positive carbon balance almost 2-fold relative to healthy ungrazed plants …

Effects Of Iron, Silicate, And Light On Dimethylsulfoniopropionate Production In The Australian Subantarctic Zone, G. R. Ditullio, P. N. Sedwick, D. R. Jones, P. W. Boyd, A. C. Crossley, D. A. Hutchins

OES Faculty Publications

Shipboard bottle incubation experiments were performed to investigate the effects of iron, light, and silicate on algal production of particulate dimethylsulfoniopropionate (DMSP_p) in the Subantarctic Zone (SAZ) south of Tasmania during March 1998. Iron enrichment resulted in threefold to ninefold increases in DMSP_p concentrations relative to control treatments, following 7 and 8-day incubation experiments. Additions of Fe and Si preferentially stimulated the growth of lightly-silicified pennate diatoms and siliceous haptophytes, respectively, to which we attribute the increased DMSP_p production in the incubation bottles. Both of these algal groups were previously believed to be low DMSP_{p …}

Absorption Efficiencies And Biochemical Fractionation Of Assimilated Compounds In The Cold Water Appendicularian Oikopleura Vanhoeffeni, Alexander B. Bochdansky, Don Deibel, Richard B. Rivkin

OES Faculty Publications

Using Ge-68:C-14 dual-labeling, we investigated the absorption efficiency of diatom carbon for the cold water appendicularian Oikopleura vanhoeffeni. The absorption efficiency of bulk carbon (mean = 67%) was not influenced by body size or ingestion rate. For the first time for a pelagic tunicate, food and feces were fractionated into their major biochemical constituents (i.e., low-molecular-weight compounds, lipid, protein, and polysaccharide), allowing calculation of absorption efficiencies for each fraction. Low-molecular-weight compounds and proteins were preferentially absorbed over lipids and polysaccharides. However, predicted C:N ratios of the fecal pellets of O. vanhoeffeni were in the lower range of C:N ratios …

Organic Carbon, Hydrogen, And Nitrogen Concentrations In Surficial Sediments From Western Long Island Sound, Connecticut And New York, Roman Zajac, Larry J. Poppe, Ralph S. Lewis, S E. Pratt, Zofia J. Mlodzinska, B. B. Taylor, Mary L. Digiacomo-Cohen

Biology and Environmental Science Faculty Publications

Total organic carbon, hydrogen, and nitrogen (CHN) analyses were performed on 147 surficial sediment samples from study areas off the Norwalk Islands and Milford, Connecticut, in western Long Island Sound. The CHN data and gross lithologic descriptions of the sediments are reported herein. The concentrations of total organic carbon (TOC), hydrogen, and nitrogen in these samples average 1.54, 1.40, and 0.17 weight percent, respectively. The individual CHN concentrations vary inversely with grain size, with CHN values increasing with the percent fines. Increasing nutrient inputs and decreasing circulation cause TOC and nitrogen values to generally increase westward within the Sound. C/N …