Life Sciences Commons^™

An Integrative Salt Marsh Conceptual Framework For Global Comparisons, Erik S. Yando, Scott F. Jones, W. Ryan James, Denise D. Colombano, Diana I. Montemayor, Stefanie Nolte, Jacqueline L. Raw, Shelby L. Ziegler, Luzhen Chen, Daniele Daffonchio, Marco Fusi, Kerrylee Rogers, Liudmila Sergienko

Biological Sciences Faculty Publications

Salt marshes occur globally across climatic and coastal settings, providing key linkages between terrestrial and marine ecosystems. However, salt marsh science lacks a unifying conceptual framework; consequently, historically well-studied locations have been used as normative benchmarks. To allow for more effective comparisons across the diversity of salt marshes, we developed an integrative salt marsh conceptual framework. We review ecosystem-relevant drivers from global to local spatial scales, integrate these multi-scale settings into a framework, and provide guidance on applying the framework using specific variables on 11 global examples. Overall, this framework allows for appropriate comparison of study sites by accounting for …

Nestedness And Modularity Of Avian Metacommunities Across Gradients Of Chesapeake Bay Island Characteristics, Grant Walter Bowers

Biological Sciences Theses & Dissertations

Islands are not only great models for understanding the ways in which communities are linked by the dispersal of their members to form metacommunities, but are of particular interest to conservationists. One important aspect of metacommunity structure is the degree of nestedness—whether or not less speciose communities are perfect subsets of more speciose communities. Another important metric of metacommunity structure is modularity—the degree to which communities belong to modules composed of other communities that share the same species but have little species overlap with communities from different modules. Environmental gradients have received insufficient attention as predictors of metacommunity nestedness and …

Nutrient Improvements In Chesapeake Bay: Direct Effect Of Load Reductions And Implications For Coastal Management, Rebecca R. Murphy, Jennifer Keisman, Jon Harcum, Renee R. Karrh, Mike Lane, Elgin S. Perry, Qian Zhang

Biological Sciences Faculty Publications

In Chesapeake Bay in the United States, decades of management efforts have resulted in modest reductions of nutrient loads from the watershed, but the corresponding improvements in estuarine water quality have not consistently followed. Generalized additive models were used to directly link river flows and nutrient loads from the watershed to nutrient trends in the estuary on a station-by-station basis, which allowed for identification of exactly when and where responses are happening. Results show that Chesapeake Bay’s total nitrogen and total phosphorus conditions are mostly improving after accounting for variation in freshwater flow. Almost all of these improving nutrient concentrations …

High Frequency Temperature Variability Reduces The Risk Of Coral Bleaching, Aryan Safaie, Nyssa J. Silbiger, Timothy R. Mcclanahan, Geno Pawlak, Daniel J. Barshis, James L. Hench, Gareth J. Williams, Kristen A. Davis

Biological Sciences Faculty Publications

Coral bleaching is the detrimental expulsion of algal symbionts from their cnidarian hosts, and predominantly occurs when corals are exposed to thermal stress. The incidence and severity of bleaching is often spatially heterogeneous within reef-scales (km), and is therefore not predictable using conventional remote sensing products. Here, we systematically assess the relationship between in situ measurements of 20 environmental variables, along with seven remotely sensed SST thermal stress metrics, and 81 observed bleaching events at coral reef locations spanning five major reef regions globally. We find that high-frequency temperature variability (i.e., daily temperature range) was the most influential factor in …

Link Between Local Phenology And Climate Change, Blake Steiner, Tatyana Lobova

Virginias Collegiate Honors Council Conference

The SouthEast Virginia Phenology Project was initiated as collaboration between Norfolk Botanical Garden and Old Dominion University in 2010 to document phenology of seven native plants and potential effects of the climate change on their life cycle. The air temperature in Norfolk has increased on average by 0.02ºC per year since 1980. Four out of seven of taxonomically diverse plant species (Mayapple, Flowering Dogwood, Highbush Blueberry, and Common ButtonBush) exhibited significant sensitivity to warming temperatures. Of these four, only Common Buttonbush (Cephalanthus occidentalis) had shown significant phenophases shift. Specifically, first flowering and first fruiting dates had shifted 2.7 …

Understanding Ocean Acidification Impacts On Organismal To Ecological Scales, Andreas J. Andersson, David I. Kline, Peter J. Edmunds, Stephen D. Archer, Nina Bednarsek, Robert C. Carpenter, Meg Chadsey, Philip Goldstein, Andrea G. Grottoli, Thomas P. Hurst, Andrew L. King, Janet E. Kübler, Ilsa B. Kuffner, Katherine R.M. Mackey, Bruce A. Menge, Adina Paytan, Ulf Riebesell, Astrid Schnetzer, Mark E. Warner, Richard C. Zimmerman

OES Faculty Publications

Ocean acidification (OA) research seeks to understand how marine ecosystems and global elemental cycles will respond to changes in seawater carbonate chemistry in combination with other environmental perturbations such as warming, eutrophication, and deoxygenation. Here, we discuss the effectiveness and limitations of current research approaches used to address this goal. A diverse combination of approaches is essential to decipher the consequences of OA to marine organisms, communities, and ecosystems. Consequently, the benefits and limitations of each approach must be considered carefully. Major research challenges involve experimentally addressing the effects of OA in the context of large natural variability in seawater …

Investigations Of Phytoplankton Diversity In Chesapeake Bay, Todd Arthur Egerton

Biological Sciences Theses & Dissertations

Characterizing the diversity of a community in relation to environmental conditions and ecosystem functions are core concepts in ecology. While decades of research have led to a growing comprehension of diversity in many ecosystems, our understanding in aquatic habitats and microbial organisms remains relatively limited. Phytoplankton represent a diverse and important group that contribute approximately half of global primary productivity and are intrinsically connected to changing environmental conditions, especially in systems as dynamic as estuaries. To better understand the ecological processes governing phytoplankton composition and diversity, spatial and temporal patterns of environmental parameters and their relation to the algal community …

Corrected Numbers For Fish On Red List, Bruce B. Collette, Beth Polidoro, Kent Carpenter

Biological Sciences Faculty Publications

(First paragraph) Kelly Swing gives inaccurate numbers for marine fish species on the International Union for Conservation of Nature (IUCN) Red List of Threatened Species. He also mistakenly conflates the scientific process of species assessment for the Red List with the separate political process of IUCN member voting (Nature 494, 314; 2013).

Fecal Indicator Bacteria In Knitting Mill Creek With A Comparison Of Methods Used To Enumerate E. Coli, Manju Nagarajan

OES Theses and Dissertations

This research seeks to evaluate the impact of an urban, multi-use neighborhood on the bacteriological quality of water in Knitting Mill Creek, a blind arm of the Lafayette River, a sub-estuary of the lower Chesapeake Bay. A principal objective was to determine the effects of rainfall, a surrogate for run-off, on water-column concentrations of fecal-indicator bacteria (FIB). I collected water samples weekly (September 2009-December 2010) and biweekly (January 2010-December 2011) at a storm-sewer outfall and a nearby marina and quantified their E. coli and enterococci concentrations using Colilert-18 and Enterolert, most-probable-number assays. In addition, I took monthly samples for these …

On The Movement Of Beluga Whales In Cook Inlet, Alaska: Simulations Of Tidal And Environmental Impacts Using A Hydrodynamic Inundation Model, Tal Ezer, Roderick Hobbs, Lie-Yauw Oey

CCPO Publications

The population of beluga whales in Cook Inlet, Alaska, is in decline, and since 2000 these whales have been under consideration for designation as "endangered" under the Endangered Species Act (and were placed on the list in October 2008, just before this article went to press). In order to study environmental and hydrodynamic impacts on the belugas' movements and survival in the unique habitat of the inlet, a three-dimensional ocean circulation and inundation model is combined with satellite-tracked beluga whale data. Model-wale data comparisons from two whale paths during a five-day period (september 17-21, 2000) covering 10 tidal cycles suggest …

Hydrographic Observations During The 2002 Ioc Contaminant Baseline Survey In The Western Pacific Ocean, C. I. Measures, Greg A. Cutter, W. M. Landing, R. T. Powell

OES Faculty Publications

The 2002 IOC Contaminant Baseline Survey in the western Pacific Ocean was the fourth in a series of cruises intended to establish the contemporary concentrations of trace elements and other materials in the major water masses of the ocean and to illuminate the pathways by which materials delivered to the surface ocean are incorporated in the subsurface waters. The expedition occupied 9 vertical profile stations encompassing the subtropical and subarctic gyre of the western North Pacific. In addition, underway surface water samples were collected during transits between the stations. This paper uses the temperature, salinity, nutrient, oxygen, and chlorophyll data …

Population Dynamics Of Oryzomys Palustris And Microtus Pennsylvanicus In Virginia Tidal Marshes, Christopher P. Bloch, Robert K. Rose

Biological Sciences Faculty Publications

Oryzomys palustris (marsh rice rat) and Microtus pennsylvanicus (meadow vole) cohabit coastal marshes in the mid-Atlantic US. Both were live-trapped for 23 months at two tidal marsh sites in Virginia to assess their demography near the margins of their distributions. In the presence of dense vegetation, population dynamics of the two species were seasonal and positively correlated, with densities declining through the winter. At the more sparsely vegetated site, densities of both species were lower, and densities of M. pennsylvanicus were negatively correlated with those of O. palustris. Patterns of reproduction differed between the species. O. palustris was reproductively …

A Biooptical Model Of Irradiance Distribution And Photosynthesis In Seagrass Canopies, Richard C. Zimmerman

OES Faculty Publications

Although extremely vulnerable to coastal eutrophication, seagrasses represent important structuring elements and sources of primary production in shallow waters. They also generate an optical signature that can be tracked remotely. Accurate knowledge of light absorption and scattering by submerged plant canopies permits the calculation of important plant- and ecosystem-level properties, including rates of photosynthesis, vegetation abundance, and distribution. The objectives of this study were to develop a realistic, yet simply parameterized two-flow model of plane irradiance distribution through a seagrass canopy submerged in an optically active water column, to evaluate its performance against in situ measurements, and to explore the …

Effects Of Epiphyte Load On Optical Properties And Photosynthetic Potential Of The Seagrasses Thalassia Testudinum Banks Ex König And Zostera Marina L, Lisa A. Drake, Fred C. Dobbs, Richard C. Zimmerman

OES Faculty Publications

The biomass and optical properties of seagrass leaf epiphytes were measured to evaluate their potential impact on the photosynthetic performance of the seagrasses Thalassia testudinum Banks ex König (turtlegrass) and Zostera marina L. (eelgrass). Turtlegrass was obtained from oligotrophic waters near Lee Stocking Island, Bahamas; eelgrass was collected from a eutrophic environment in Monterey Bay, California. Leaf–epiphyte loads were characterized visually and quantified using measurements of their phospholipid biomass. Light absorption and reflectance of the intact epiphyte layer were determined spectrophotometrically. Turtlegrass epiphytes from the oligotrophic site absorbed a maximum of 36% of incident light in peak chlorophyll absorption …

Identifying Sources Of Fecal Pollution In The Roanoke River, Roanoke County, Virginia, J. Brooks Crozier, Brian Clark, Holly Weber

Virginia Journal of Science

Antibiotic Resistance Patterns (ARPs) of Enterococcus spp. were used as a phenotypic fingerprint to compare and categorize unknown-source isolates in an impaired segment of the Roanoke River, Roanoke County, Virginia. Antibiotic resistance analysis (ARA) of enterococci has been effectively used to differentiate among sources of fecal contamination in many geographic regions in the United States. Enterococcus spp. were used as a fecal indicator in a library consisting of 1,562 known-source isolates. Two-way analysis indicated that approximately 95% of the unknown-source isolates collected were of animal origin. A 3-way analysis indicated that 61% of the unknowns were of livestock origin while …

A Comparison Of Phytoplankton Communities In Lake Prince And The Western Branch Reservoir, Suffolk, Virginia, Cara Marie Muscio

Biological Sciences Theses & Dissertations

Lake Prince and the Western Branch Reservoir are two eutrophic bodies of water located in Suffolk, Virginia. Lake Prince and its two small tributaries join the Western branch via a constructed spillway. This lake system is a source of water for the surrounding municipalities, and a recreational area for community citizens. In the past, these bodies of water had repeated incidents of low oxygen and nuisance algal blooms, particularly cyanobacteria species. As a result aerators have been installed in the main body of both Lake Prince and the Western Branch Reservoir. In addition, a pipeline has been installed from North …

Effects Of Human Disturbances On The Behavior Of Dabbling Ducks, Melissa Lynn Pease

Biological Sciences Theses & Dissertations

Disturbance of wintering and migrating birds by human activities can cause birds to expend energy in avoidance of humans and reduces the time available for resting and feeding at a time in the annual cycle when fat deposition and energy conservation are important. Also, human disturbances can effectively cause habitat loss by displacing birds from feeding or resting habitat. Managers of natural resources are increasingly faced with decisions about the types and amounts of public use that should be allowed without lowering the value of the resource for wildlife. In order for managers to make decisions about how to minimize …

Effects Of Collection, Transport, And Redeployment Methods On Natural Mortality Of Rangia Cuneata (Mactridae) Used In Biomonitoring Studies, Eugene G. Maurakis, David V. Grimes, William C. Gretes

Virginia Journal of Science

Sporadic, high mortality in test populations of wedge clams (Rangia cuneata) has limited the potential for using this otherwise desirable test organism in biomonitoring studies. To determine whether high mortality was due to ontogenic or experimental variables, a two-phased study was conducted. In phase I, mortality of collected and re-deployed wedge clams, subjected to varying transport conditions, was determined at 7, 14, 21 and 60 days re-deployment. The use of three transport times (1, 2, 3 hr.), two vehicle conditions (open, closed) and three transport treatments (open, closed, iced containers) yielded 18 test groups. Individual test group mortalities …

Stomach Content Analysis Of Stranded Bottlenose Dolphins, Tursiops Truncatus, In Virginia, 1987-1996, John Mcgurk

Biological Sciences Theses & Dissertations

I examined the stomach contents from 94 bottlenose dolphins, Tursiops truncatus, that were stranded along the Virginia coastline from 1987 through 1996. Samples from 1987 through 1991 were obtained from the National Museum of Natural History (NMNH) and samples from 1992 through 1996 were collected by the Virginia Marine Science Museum (VMSM) Stranding Team. Prey species were identified using fish otoliths and cephalopod beaks.

The dolphins examined fed on 23 species of fish and one genus of cephalopods. The primary prey species was Atlantic croaker (Micropogonias undulatus); secondary species were weakfish (Cynoscion regalia), spot (Leiostomus xanthurus), silver perch (Bairdiella chrysoura), …

Zooplankton Community Dynamics In The Elizabeth River, Virginia, William C. Sharp

Biological Sciences Theses & Dissertations

Zooplankton community structure and dynamics were studied over a 12 month period in the Elizabeth River, an industrially polluted tidal river in the Chesapeake Bay estuarine system. An additional site in this estuary (Hampton Roads) was sampled for comparative purposes. Multivariate analysis indicated five distinct temporal groups occurred during the year, but there were no significant differences in spatial composition within the river. Maximum zooplankton concentrations were observed in July and lowest abundances were observed in February, March, and November. Copepods, especially Acartia species, were the most abundant components of the zooplankton community, comprising 67 to 93% of the total …

Molecular And Physiological Responses Of Diatoms To Variable Levels Of Irradiance And Nitrogen Availability: Growth Of Skeletonema Costatum In Simulated Upwelling Conditions, G. Jason Smith, Richard C. Zimmerman, Randall S. Alberte

OES Faculty Publications

Molecular mechanisms that drive metabolic acclimation to environmental shifts have been poorly characterized in phytoplankton. In this laboratory study. the response of light- and N-limited Skeletonema costatum cells to an increase in light and NO₃ availability was examined. C assimilation was depressed relative to N assimilation early in enrichment, and the photosynthetic quotient (O₂: CO₂) increased, consistent with the shunting of reducing equivalents from CO₂ fixation to NO₃- reduction. The concomitant increase in dark respiration was consistent with the increased energetic demand associated with macromolecular synthesis. The accelerations of N-specific rates of …

Assessment Of Organic And Metal Contaminants In Lower Back Bay And Upper Currituck Sound, Kate Benkert

V. Poster Abstracts

Studies were conducted at Mackay Island National Wildlife Refuge in 1988 and 1989 to provide baseline data for an assessment of organic chemicals and metal contaminants in the aquatic ecosystem. Longnose gar, gizzard shad, snapping turtles, common rangia clams and sediments were collected from sites in lower Back Bay and upper Currituck Sound for contaminant analyses.

Composite sediment samples were analyzed for the presence of metals, organochlorine pesticides and polycyclic aromatic hydrocarbons (PAHs). Organochlorine pesticides were not detected in the sediments. Various PAH compounds were detected in the sediments, although at trace concentrations which just exceeded the analytical detection limit …

Acceleration Of Nutrient Uptake By Phytoplankton In A Coastal Upwelling Ecosystem: A Modeling Analysis, Richard C. Zimmerman, James N. Kremer, Richard C. Dugdale

OES Faculty Publications

Studies of upwelling centers in the eastern Pacific suggest that maximum rates of nitrate uptake (light and nutrient saturated) increase, or shift-up, as newly upwelled water moves downstream. The rate of shift-up appears to be related to irradiance and the ambient concentration of limiting nutrient at the time of upwelling. A mathematical model was developed to evaluate effects of irradiance and initial nitrate concentration on temporal patterns of shift-up and subsequent time scales of nutrient utilization over a range of simulated upwelling conditions. When rates consistent with field studies were used, complete shift-up was possible only under certain conditions, and …

Litter Production And Nutrient Content Of Litter In The Seasonally Flooded Dismal Swamp, Marta M. Gomez

Biological Sciences Theses & Dissertations

Litter production was studied in four plant communities in the Great Dismal Swamp, Virginia, that differ primarily in species composition and flooding regime. Greatest leaf deposition occurred in the more flooded communities, maple-gum (Acer-Nyssa) with 536 g m^-2 yr^-1 and cypress (Taxodium distichum (L.) Richard) with 528 g m^-2 yr^-1, followed by the cedar (Chamaecyparis thyoides (L.) BSP) and mixed hardwood (Quercus-Acer-Nyssa-Liquidambar) communities with 506 g m^-2 yr^-1 and 455 g m^-2 yr^-1, respectively. Litter nutrient concentrations were generally higher in the cypress and maple-gum stands, indicating greater nutrient availability …

Application Of Satellite Data And Lars' Data Processing Techniques To Mapping Vegetation Of The Dismal Swamp, Jeffrey Allan Messmore

Biological Sciences Theses & Dissertations

This study concerned the feasibility of using digital satellite imagery and automatic data processing (ADP) techniques as a means of mapping swamp forest vegetation. Multispectral scanner data acquired by the Earth Resources Technology Satellite (ERTS-1; renamed LANDSAT-1) was analyzed using ADP techniques developed by Purdue University's Laboratory for Applications of Remote Sensing (LARS). The site for this investigation was the Dismal Swamp, a 210,000 acre swamp forest located south of Suffolk, Va. on the Virginia-North Carolina border. Two basic classification strategies were employed in determining the vegetation mapping capability of ERTS-1 data. The initial classification utilized unsupervised techniques which produced …