Open Access. Powered by Scholars. Published by Universities.®

Life Sciences Commons

Open Access. Powered by Scholars. Published by Universities.®

Articles 1 - 6 of 6

Full-Text Articles in Life Sciences

Characterizing The Performance And Behaviors Of Runners Using Twitter, Qian He, Emmanuel Agu, Diane Strong, Bengisu Tulu, Peder Pedersen Dec 2015

Characterizing The Performance And Behaviors Of Runners Using Twitter, Qian He, Emmanuel Agu, Diane Strong, Bengisu Tulu, Peder Pedersen

Emmanuel O. Agu

Running is a popular physical activity that improves physical and mental wellbeing. Unfortunately, up-to- date information about runners’ performance and psychological wellbeing is limited. Many questions remain unanswered, such as how far and how fast runners typically run, their preferred running times and frequencies, how long new runners persist before dropping out, and what factors cause runners to quit. Without hard data, establishing patterns of runner behavior and mitigating the challenges they face are difficult. Collecting data manually from large numbers of runners for research studies is costly and time consuming. Emerging Social Networking Services (SNS) and fitness tracking devices …


Work Integrated Learning In Stem In Australian Universities: Final Report: Submitted To The Office Of The Chief Scientist, Daniel Edwards, Kate Perkins, Jacob Pearce, Jennifer Hong Sep 2015

Work Integrated Learning In Stem In Australian Universities: Final Report: Submitted To The Office Of The Chief Scientist, Daniel Edwards, Kate Perkins, Jacob Pearce, Jennifer Hong

Dr Daniel Edwards

The Australian Council for Educational Research (ACER) undertook this study for the Office of the Chief Scientist (OCS). It explores the practice and application of Work Integrated Learning (WIL) in STEM, with a particular focus on natural and physical sciences, information technology, and agriculture departments in Australian universities. The project involved a detailed ‘stocktake’ of WIL in practice in these disciplines, with collection of information by interview, survey instruments, consultation with stakeholders and literature reviews. Every university in Australia was visited as part of this project, with interviews and consultation sessions gathering insight from more than 120 academics and support …


Work Integrated Learning In Stem In Australian Universities: Final Report: Submitted To The Office Of The Chief Scientist, Daniel Edwards, Kate Perkins, Jacob Pearce, Jennifer Hong Sep 2015

Work Integrated Learning In Stem In Australian Universities: Final Report: Submitted To The Office Of The Chief Scientist, Daniel Edwards, Kate Perkins, Jacob Pearce, Jennifer Hong

Dr Jacob Pearce

The Australian Council for Educational Research (ACER) undertook this study for the Office of the Chief Scientist (OCS). It explores the practice and application of Work Integrated Learning (WIL) in STEM, with a particular focus on natural and physical sciences, information technology, and agriculture departments in Australian universities. The project involved a detailed ‘stocktake’ of WIL in practice in these disciplines, with collection of information by interview, survey instruments, consultation with stakeholders and literature reviews. Every university in Australia was visited as part of this project, with interviews and consultation sessions gathering insight from more than 120 academics and support …


Improving The Computer Science In Bioinformatics Through Open Source Pedagogy, John David N. Dionisio, Kam D. Dahlquist Aug 2015

Improving The Computer Science In Bioinformatics Through Open Source Pedagogy, John David N. Dionisio, Kam D. Dahlquist

John David N. Dionisio

Bioinformatics relies more than ever on information technologies. This pressures scientists to keep up with software development best practices. However, traditional computer science curricula do not necessarily expose students to collaborative and long-lived software development. Using open source principles, practices, and tools forms an effective pedagogy for software development best practices. This paper reports on a bioinformatics teaching framework implemented through courses introducing computer science students to the field. The courses led to an initial product release consisting of software and an Escherichia coli K12 GenMAPP Gene Database, within a total "incubation time" of six months.


Classification And Cluster Analysis Of Complex Time-Of-Flight Secondary Ion Mass Spectrometry For Biological Samples, Stephen E. Reichenbach, Xue Tian, Qingping Tao, Alex Henderson Jul 2015

Classification And Cluster Analysis Of Complex Time-Of-Flight Secondary Ion Mass Spectrometry For Biological Samples, Stephen E. Reichenbach, Xue Tian, Qingping Tao, Alex Henderson

Steve Reichenbach

Identifying and separating subtly different biological samples is one of the most critical tasks in biological analysis. Time-of-flight secondary ion mass spectrometry (ToF-SIMS) is becoming a popular and important technique in the analysis of biological samples, because it can detect molecular information and characterize chemical composition. ToF-SIMS spectra of biological samples are enormously complex with large mass ranges and many peaks. As a result the classification and cluster analysis are challenging. This study presents a new classification algorithm, the most similar neighbor with a probability-based spectrum similarity measure (MSN- PSSM), which uses all the information in the entire ToF- SIMS …


Flow Of Dna Solutions In A Microfluidic Gradual Contraction, Shelly Gulati, Susan J. Muller, Dorian Liepmann Jan 2015

Flow Of Dna Solutions In A Microfluidic Gradual Contraction, Shelly Gulati, Susan J. Muller, Dorian Liepmann

Shelly Gulati

The flow of λ-DNA solutions in a gradual micro-contraction was investigated using direct measurement techniques. The effects on DNA transport in microscale flows are significant because the flow behavior is influenced by macromolecular conformations, both viscous and elastic forces dominate inertial forces at this length scale, and the fully extended length of the molecule approaches the characteristic channel length wc (L/wc ∼ 0.13). This study examines the flow of semi-dilute and entangled DNA solutions in a gradual planar micro-contraction for low Reynolds numbers (3.7 × 10−6 < Re < 3.1 × 10−1) and high Weissenberg numbers (0.4 < Wi < …