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Full-Text Articles in Life Sciences

Investigation Of The Regulation Mechanism Of Arabidopsis Thaliana Anion Channel Slah2, Fen-Yong Yao, Guo-Ning Qi, Jamshaid Husssain Jan 2017

Investigation Of The Regulation Mechanism Of Arabidopsis Thaliana Anion Channel Slah2, Fen-Yong Yao, Guo-Ning Qi, Jamshaid Husssain

Turkish Journal of Botany

In recent years a slow-type anion channel (SLAC) family composing five members, including slow anion channel associated 1 (SLAC1) and four SLAC1 homologs (SLAHs), has been identified in Arabidopsis thaliana. The anion channels are activated by calcium-dependent protein kinases (CPKs) and play crucial roles in mediating anion fluxes across plasma membranes. SLAH2 is specifically expressed in root stele cells and has been characterized as a nitrate-selective anion channel activated by CPK21 and CBL-interacting protein kinase 23 (CIPK23). However, the interaction between CPKs and SLAH2 and how it is regulated remains to be elucidated. In this study we found that SLAH2 …


Genetic Diversity And Molecular Characterization Of Natural Pancratium Maritimum L. Populations By Dna Markers, Ceren Eli̇bol, Behi̇ye Banu Bi̇lgen Jan 2017

Genetic Diversity And Molecular Characterization Of Natural Pancratium Maritimum L. Populations By Dna Markers, Ceren Eli̇bol, Behi̇ye Banu Bi̇lgen

Turkish Journal of Botany

Bulbous plants play an important role in Turkey's biodiversity due to their great potential use in various industries. Sea daffodils (Pancratium maritimum), one aspect of Turkey's biological richness, represent an important bulbous plant that generally spreads on sand dunes and can be seen only on the Mediterranean coast and on its certain beaches in our country. In this study, the genetic structure and genetic diversity of four natural P. maritimum populations have been determined by RAPD and nrSSR primers. Eight RAPD and four nrSSR loci were analyzed. All RAPD and nrSSR loci, except SSR-20, were found to be polymorphic. Genetic …


Nomenclatural And Taxonomic Notes On Plantago Myosuros (Plantaginaceae) And Its Synonymy, Gustavo Hassemer Jan 2017

Nomenclatural And Taxonomic Notes On Plantago Myosuros (Plantaginaceae) And Its Synonymy, Gustavo Hassemer

Turkish Journal of Botany

Plantago myosuros is an herbaceous plant species native to South America that is naturalized in parts of Europe. Here, I designate a lectotype for the name P. myosuros and for two of its synonyms, P. nigritella and P. rojasii. I also propose the synonymization of the currently accepted P. myosuros subsp. humilior with P. myosuros. Images of the lectotypes of these four names are provided.


Transgenic Basmati Rice Transformed With The Xa21 Gene Shows Resistance Against Bacterial Leaf Blight, Zahid Mukhtar, Shahida Hasnain Jan 2017

Transgenic Basmati Rice Transformed With The Xa21 Gene Shows Resistance Against Bacterial Leaf Blight, Zahid Mukhtar, Shahida Hasnain

Turkish Journal of Botany

Rice (Oryza sativa L.) cultivar Super Basmati was transformed with a cloned gene, Xa21, through particle bombardment method. Twenty-two plants were recovered from the selected calli. Initial screening through PCR confirmed the presence of the transgene in 21 plants. Southern analysis further confirmed the integration of the Xa21 gene into the genome of these transgenic plants. Analysis of the T1 generation revealed that both the hpt and Xa21 genes were successfully transmitted from the primary transformants to the progeny. Bioassays with two local isolates of bacterial leaf blight pathogen, Xanthomonas oryzae pv. oryzae (Xoo), showed that 14 transgenic lines were …


Relationships Between Sorghum Bicolor (Poaceae) And Its Closerelatives Based On Genomic In Situ Hybridization Evidence, Qing Liu, H L, Jun Wen Jan 2017

Relationships Between Sorghum Bicolor (Poaceae) And Its Closerelatives Based On Genomic In Situ Hybridization Evidence, Qing Liu, H L, Jun Wen

Turkish Journal of Botany

Sorghum bicolor (L.) Moench (sorghum) is a naturally well-established diploid species with 2n = 2x = 20. Here we provide evidence to identify the genomic relationships of S. bicolor and its extant relatives using genomic in situ hybridization. The genomic divergences between S. bicolor and its close relatives may be presented as: S. bicolor-S. x drummondii (Nees ex Steud.) Millsp. & Chase < S. bicolor-S. x almum Parodi < S. bicolor S. arundinaceum (Desv.) Stapf < S. bicolor-S. propinquum (Kunth) Hitchc. Sorghum arundinaceum probe signals showed spotted or painted patterns on the S. bicolor chromosomes, indicating that the degree of genomic divergence between S. bicolor and S. arundinaceum is distinct. It is reasonable to infer that S. bicolor might have diverged from S. arundinaceum in the early diversification history of the subgenus. The probe signal intensity of S. arundinaceum and S. propinquum is greater on the 17 chromosomes than on the remaining 23 chromosomes of S. halepense (L.) Pers., whereas S. bicolor and S. propinquum probes produced spotted or patchy signals on the 40 S. halepense chromosomes. Therefore, the degree of genomic divergence may be presented as: S. halepense-S. bicolor < S. halepense-S. arundinaceum < S. halepense-S. propinquum.


Mapping And Analyzing The Spatial Distribution Of Thetribe Triticeae Dumort. (Poaceae) In Turkey, Hakan Mete Doğan, Evren Cabi̇, Musa Doğan Jan 2017

Mapping And Analyzing The Spatial Distribution Of Thetribe Triticeae Dumort. (Poaceae) In Turkey, Hakan Mete Doğan, Evren Cabi̇, Musa Doğan

Turkish Journal of Botany

Triticeae Dumort. (Poaceae), or true grasses, the fifth-largest plant family in the world, are of great importance in terms of human life and civilization. Therefore, understanding the spatial distribution of the family members is important for botanists, plant producers, and breeders. Turkey is one of two gene centers of this family. In this study, the spatial distribution of Triticeae in Turkey was mapped in geographic information systems (GIS) by utilizing a large number of specimens collected from 1006 georeferenced sampling sites between 2004 and 2010. Canonical correspondence analysis (CCA) was carried out in order to understand the spatial distribution of …


An Ethnobotanical Survey In Selected Districts Of The Black Sea Region (Turkey), Emi̇ne Burcu Yeşi̇lyurt, Işil Şi̇mşek, Gali̇p Akaydin, Erdem Yeşi̇lada Jan 2017

An Ethnobotanical Survey In Selected Districts Of The Black Sea Region (Turkey), Emi̇ne Burcu Yeşi̇lyurt, Işil Şi̇mşek, Gali̇p Akaydin, Erdem Yeşi̇lada

Turkish Journal of Botany

The current study was carried out in selected districts of the Black Sea region of Turkey, in Trabzon (center), Çorum (İskilip town), Karabük (Yenice town), Amasya (Kapıkaya village), and Amasya (Belmebük village) in order to document the wild plants used by the local inhabitants, i.e. as a remedy or foodstuff or for other purposes. The data were collected from 352 individuals residing in these districts and volunteering to participate in the research through face-to-face interviewing. Depending on the data collected, the parts of the plants used, the purpose in using them, and the ways of preparation (simply cooking or decoction, …


Pollen Morphology Of Asian Vigna Species (Genus Vigna; Subgenus Ceratotropis) From India And Its Taxonomic Implications, Suraj Dhanyakumar Umdale, Makarand Mohanrao Aitawade, Nikhil Babruan Gaikwad, Latha Madhavan, Shrirang Ramchandra Yadav, Satyawada Rama Rao, Kangila Venkataraman Bhat Jan 2017

Pollen Morphology Of Asian Vigna Species (Genus Vigna; Subgenus Ceratotropis) From India And Its Taxonomic Implications, Suraj Dhanyakumar Umdale, Makarand Mohanrao Aitawade, Nikhil Babruan Gaikwad, Latha Madhavan, Shrirang Ramchandra Yadav, Satyawada Rama Rao, Kangila Venkataraman Bhat

Turkish Journal of Botany

The pollen morphology of 22 Asian Vigna [subgenus Ceratotropis (Piper) Verdc.] species, including wild and cultivated taxa from India, was investigated with light microscopy and scanning electron microscopy. The quantitative data were analyzed by descriptive statistics and multivariate statistics. The pollen grains are prolate spheroidal in shape with equatorial diameter of 36.06-116.33 μm and polar diameter of 36.31-120.96 μm in equatorial view. The small pollen dimensions were observed in Vigna hainiana, V. trilobata, and V. indica and the largest in V. vexillata. The pollen grains have reticulate-homobrochate and reticulate-heterobrochate types of pollen sculpture. The lumina are psilate or granulate with …


Studies On The Floral Anatomy And Scent Chemistry Of Titan Arum(Amorphophallus Titanum, Araceae), Vijayasankar Raman, Nurhayat Tabanca, Betül Demi̇rci̇, Ikhlas Khan Jan 2017

Studies On The Floral Anatomy And Scent Chemistry Of Titan Arum(Amorphophallus Titanum, Araceae), Vijayasankar Raman, Nurhayat Tabanca, Betül Demi̇rci̇, Ikhlas Khan

Turkish Journal of Botany

Amorphophallus titanum (Becc.) Becc. ex Arcang., the titan arum, is popularly known for having the world's largest unbranched inflorescence. The enormous flower-like inflorescence is also called 'corpse flower' or 'carrion flower' due to the characteristic putrid odor of the bloom. The present study illustrates detailed anatomy and micromorphology of the inflorescence by light and scanning electron microscopy. Collenchyma was found to be the major tissue providing mechanical support in the spathe. The appendix consisted of a dense parenchymatous cortex enclosing a hollow center traversed by loose networks of aerenchyma. Anthocyanin pigments found in the epidermises and cortical tissues imparted a …


Systematic Studies On The Zygophyllaceae Of Saudi Arabia: New Combinationsin Tetraena Maxim., Dhafer Alzahrani, Enas Albokhari Jan 2017

Systematic Studies On The Zygophyllaceae Of Saudi Arabia: New Combinationsin Tetraena Maxim., Dhafer Alzahrani, Enas Albokhari

Turkish Journal of Botany

During 2013 and 2014, fresh material of Tetraena hamiensis (Schweinf.) Beier & Thulin was collected from four different localities in Saudi Arabia. Some morphological differences, especially in leaf, flower parts, and fruit characters, were observed among individuals of this species within the same location. Principal coordinates analysis and the unweighted pair group method with arithmetic algorithm clustering test split off individuals of T. hamiensis with these morphological varieties as three clusters; one comprises individuals with characters overlapping those of T. hamiensis, one comprises individuals with characters overlapping those of T. qatarensis, and one comprises individuals with characters overlapping those of …


Anthostomelloides Krabiensis Gen. Et Sp. Nov. (Xylariaceae) From Pandanus Odorifer (Pandanaceae), Saowaluck Tibpromma, Dinushani Anupama Daranagama, Saranyaphat Boonmee, Itthayakorn Promputtha, Sureeporn Nontachaiyapoom, Kevin David Hyde Jan 2017

Anthostomelloides Krabiensis Gen. Et Sp. Nov. (Xylariaceae) From Pandanus Odorifer (Pandanaceae), Saowaluck Tibpromma, Dinushani Anupama Daranagama, Saranyaphat Boonmee, Itthayakorn Promputtha, Sureeporn Nontachaiyapoom, Kevin David Hyde

Turkish Journal of Botany

An Anthostomella-like taxon was obtained from Pandanus odorifer (Forssk.) Kuntze (Pandanaceae) collected in Krabi Province in Thailand. Morphological data plus phylogenetic analyses of combined ITS, LSU, RPB2, and β-tubulin sequence data clearly separate this Anthostomella-like taxon from other known genera in Xylariaceae. In this paper, we introduce this taxon as a new genus, Anthostomelloides, in the family Xylariaceae, with A. krabiensis as the type. A detailed morphological description, phylogenetic tree, photomicrographs of A. krabiensis, keys to Anthostomella-like genera, and a comparison of A. krabiensis with the morphologically similar taxa in Xylariaceae are provided.


Covariation In Diaspore Mass And Dispersal Patterns In Threemediterranean Coastal Dunes In Southern Spain, Carmen Rodriguez, Teresa Navarro, Ali El Keblawy Jan 2017

Covariation In Diaspore Mass And Dispersal Patterns In Threemediterranean Coastal Dunes In Southern Spain, Carmen Rodriguez, Teresa Navarro, Ali El Keblawy

Turkish Journal of Botany

The coastal dunes of southern Spain are an original Mediterranean ecosystem, insufficiently studied under dispersal. This study explores covariation patterns among diaspore mass, size, morphology, dispersal mode, and spatial dispersal in 78 native coastal dune species. Three coastal dunes under different climates were sampled and differentiated between fixed and mobile dunes. The Pérez-Harguindeguy methodology was applied and ANOVA, Kruskal-Wallis, and Mann-Whitney U tests were used in order to analyze the covariation. Diaspores were essentially small seeds or achenes (2-4 mm, from 10-5 to 1 g). The study revealed that diaspore mass is a key trait in the differentiation among dunes. …


Reproductive Biology Of The Critically Endangered Endemic Planterodium Somanum In Turkey, Di̇lek Oskay Jan 2017

Reproductive Biology Of The Critically Endangered Endemic Planterodium Somanum In Turkey, Di̇lek Oskay

Turkish Journal of Botany

The reproductive characteristics of Erodium somanum (Geraniaceae), a critically endangered endemic species, were investigated in order to evaluate the main factors that affect its reproductive success and to evaluate their importance on its conservation. The estimated pollen/ovule ratio was calculated as 1187. Pollen viability and stigma receptivity experiments showed that stigma receptivity and pollen viability were high and synchronous throughout the anthesis. E. somanum is a strictly dioecious species and pollinated by insects. Flower visitors in the studied populations were mostly beetles and ants. The average percentage of fruit formation for each plant was determined as 46%. Capacity of seed …


Centaurea Bingoelensis (Asteraceae), A New Species From Turkey, Lütfi̇ Behçet, Ahmet İlçi̇m, Yakup Yapar Jan 2017

Centaurea Bingoelensis (Asteraceae), A New Species From Turkey, Lütfi̇ Behçet, Ahmet İlçi̇m, Yakup Yapar

Turkish Journal of Botany

Centaurea bingoelensis Behçet & İlçim is described as a new species. It is confined to Bingöl in Eastern Anatolia, Turkey. The diagnostic characters are discussed and taxonomic comments are presented. Seed and pollen characteristics were investigated using light and scanning electron microscopy. Notes on its ecology are also presented.


Alopecurus Goekyigitiana (Poaceae, Subtribe Alopecurinae Sensu Stricto),A New Species From Turkey Based On Morphological And Molecular Investigation, Evren Cabi̇, Robert J. Soreng, Lynn Gillespie, Ekaterina Boudko Jan 2017

Alopecurus Goekyigitiana (Poaceae, Subtribe Alopecurinae Sensu Stricto),A New Species From Turkey Based On Morphological And Molecular Investigation, Evren Cabi̇, Robert J. Soreng, Lynn Gillespie, Ekaterina Boudko

Turkish Journal of Botany

Alopecurus goekyigitiana, a new species from the Taurus Mountains of Turkey, is described and illustrated. Phylogenetic analyses of DNA sequence data support its relationship within Alopecurus sect. Colobachne with A. gerardi (plastid), or with the complex of A. davisii, A. lanatus, and A. vaginatus (nuclear ribosomal spacers). The new species differs from the above taxa by various combinations of characters, in having slender rhizomes and a mat-forming habit, indumentum of lower sheaths sparsely sericeous, glabrescent, culm leaf blades absent or vestigial, basal blades filiform, a dorsal awn on the lemma that is vestigial or up to 2 mm long, erect …


Spatial And Temporal Patterns Of Benthic Diatom Flora In Lake Stechlin, Germany, Beáta Szabó, Judit Padisak, Géza B. Selmeczy, Lothar Krienitz, Peter Casper, Csilla Stenger-Kovács Jan 2017

Spatial And Temporal Patterns Of Benthic Diatom Flora In Lake Stechlin, Germany, Beáta Szabó, Judit Padisak, Géza B. Selmeczy, Lothar Krienitz, Peter Casper, Csilla Stenger-Kovács

Turkish Journal of Botany

Phytoplankton and planktonic centric diatoms of Lake Stechlin have been extensively studied, while attached diatoms have received much less scientific interest. In the present study, the composition of benthic diatoms and their diversity metrics were determined and compared along the shoreline of the lake in spring 2013 and autumn 2014. Overall, 118 taxa classified in 52 genera were found, of which 15 species belonged to threat categories of the Red List for Central Europe. Species richness (33 ± 4), Shannon diversity (2.47 ± 0.23), and species composition did not show any differences between different basins. Besides the spatial homogeneity, considerable …


Proteomic Analysis Of Flowers At Two Developmental Stages In Thermopsis Turcica (Fabaceae), Mustafa Yildiz, Emre Pehli̇van, Hakan Terzi̇ Jan 2017

Proteomic Analysis Of Flowers At Two Developmental Stages In Thermopsis Turcica (Fabaceae), Mustafa Yildiz, Emre Pehli̇van, Hakan Terzi̇

Turkish Journal of Botany

Flower development is a complex physiological phenomenon that is affected by environmental stimuli and endogenous signals. Several molecular approaches have provided a comprehensive view of the physiological processes associated with flower development, but little is known about proteomic changes. Therefore, we investigated the proteomic alterations during flower development in endemic Thermopsis turcica (Vuralia turcica), an unusual legume species with 3-4 free carpels in a single flower. A comparative proteomic analysis to identify proteins involved in flower development was carried out in T. turcica. Alterations in proteomes of the flower buds and fully opened flowers were studied by two-dimensional gel electrophoresis. …


Ecological Gradient Analyses Of Plant Associations In The Thandiani Forestsof The Western Himalayas, Pakistan, Waqas Khan, Shujaul Mulk Khan, Habib Ahmad, Aamir Shakeel, Sue Page Jan 2017

Ecological Gradient Analyses Of Plant Associations In The Thandiani Forestsof The Western Himalayas, Pakistan, Waqas Khan, Shujaul Mulk Khan, Habib Ahmad, Aamir Shakeel, Sue Page

Turkish Journal of Botany

In the summers of 2012 and 2013, vegetation of Thandiani in the Western Himalayas of Pakistan was surveyed and quantified. We took evidence from relationships between 252 species and 11 measured environmental factors as well as changes in the associations' structure among 50 analysed stations with 1500 m2 plots. We analysed how the plant associations differ and develop under the influence of their respective ecological gradients. Preliminary results showed that the family Pinaceae was the most abundant family with a family importance value (FIV) of 1892.4, followed by Rosaceae with FIV = 1478.2. Rosaceae, represented by 20 species, was the …


Micromorphological Studies On The Genus Lotus L. (Fabaceae: Loteae) From Egypt, Momen Zareh, Ahmed Faried, Nashwa Farghaly Jan 2017

Micromorphological Studies On The Genus Lotus L. (Fabaceae: Loteae) From Egypt, Momen Zareh, Ahmed Faried, Nashwa Farghaly

Turkish Journal of Botany

Trichomes, epidermal cell features, and seed coat sculpturing of 12 Lotus taxa from Egypt were studied using scanning electron microscopy. In addition, statistical analysis for the taxa under investigation was carried out. The results revealed that trichomes have high taxonomic significances between studied taxa. Anticlinal and periclinal cell walls and epidermal cell shape for the stem, leaf, and calyx for each taxon were examined. Seed coat sculpturing exhibited 4 main different surface patterns categories: rugose, reticulate, sulcate, and verrucate. These features can serve as good diagnostic characters at the species level of the genus Lotus.


Classification Of Plant Communities Along Postfire Succession In Pinus Brutia (Turkish Red Pine) Stands In Antalya (Turkey), Ali̇ Kavgaci, Urban Silc, Sai̇me Başaran, Aleksander Marinsek, Mehmet Ali̇ Başaran, Petra Kosir, Nesli̇han Balpinar, Münevver Arslan, Özge Ergüler, Andraz Carni Jan 2017

Classification Of Plant Communities Along Postfire Succession In Pinus Brutia (Turkish Red Pine) Stands In Antalya (Turkey), Ali̇ Kavgaci, Urban Silc, Sai̇me Başaran, Aleksander Marinsek, Mehmet Ali̇ Başaran, Petra Kosir, Nesli̇han Balpinar, Münevver Arslan, Özge Ergüler, Andraz Carni

Turkish Journal of Botany

The paper deals with the classification of plant communities that appear along postfire succession of Pinus brutia forests (Turkish red pine). The research took place in the Antalya region in the southern part of Turkey. Samplings were performed in nine areas, with different periods after fire: 1, 2, 3, 4, 7, 12, 20, 40 years, and a mature forest with an estimated age of 60 years. Numerical classification and ordination analysis were used to determine the communities and to understand the temporal changes. The vegetation classification showed that separate plant communities can be distinguished along the succession line. It was …


A New Bryophyte Community And Three New Records For The Epiphytic Bryophyte Vegetation Of Turkey, Mevlüt Alataş, Güray Uyar Jan 2017

A New Bryophyte Community And Three New Records For The Epiphytic Bryophyte Vegetation Of Turkey, Mevlüt Alataş, Güray Uyar

Turkish Journal of Botany

Based on 38 relevés, the Lewinskyetum affinis ass. nov. (Ulotion crispae alliance) was described and characterized as a new epiphytic association from the Abant Mountains (Northwest Turkey). To the best of our knowledge, this is the first report about three epiphytic bryophyte associations, namely Dicranetum taurici, Pterigynandretum filiformis, and Orthotricho straminei-Pterigynandretum filiformis, in Turkey. In addition, multivariate analysis techniques such as two-way indicator species analysis (TWINSPAN) and detrended correspondence analysis (DECORANA) were used to examine epiphytic bryophyte communities for cluster analysis and ordination analysis, respectively.


First Genome Size Assessment In The Genus Peganum And Inthe Family Nitrariaceae: Iberian And North African Data On Peganum Harmala,Including An Intensive Sampling In Tunisia, Abdelhamid Hajji, Daniel Vitales, Mohamed Elgazzeh, Teresa Garnatje, Joan Vallès Jan 2017

First Genome Size Assessment In The Genus Peganum And Inthe Family Nitrariaceae: Iberian And North African Data On Peganum Harmala,Including An Intensive Sampling In Tunisia, Abdelhamid Hajji, Daniel Vitales, Mohamed Elgazzeh, Teresa Garnatje, Joan Vallès

Turkish Journal of Botany

Peganum harmala is a halonitrophilous perennial herb that is relevant in the landscape of steppe, semidesert, and desert territories in southern Europe, northern Africa, and southwestern Asia. We present here data on the nuclear DNA amount assessment in one Iberian and 17 Tunisian populations of this species. The 2C values, belonging to the very small genome category, ranged from 0.61 to 0.67 pg. These data are the first on genome size for the species and for the whole genus and the whole family. In addition, the somatic chromosome number (2n = 24) has been counted in one population, confirming previous …


The Complete Plastid Genome And Nuclear Genome Markers Provide Molecularevidence For The Hybrid Origin Of Pulsatilla × Hackelii Pohl., Monika Szczecinska, Grzegorz Lazarski, Katarzyna Bilska, Jakub Sawicki Jan 2017

The Complete Plastid Genome And Nuclear Genome Markers Provide Molecularevidence For The Hybrid Origin Of Pulsatilla × Hackelii Pohl., Monika Szczecinska, Grzegorz Lazarski, Katarzyna Bilska, Jakub Sawicki

Turkish Journal of Botany

This study presents the first molecularly proven data on natural hybridization in the genus Pulsatilla, including the complete plastome sequence. A plant with morphological characteristics intermediate between P. patens and P. pratensis was found near the village of Bocheniec (southern Poland). In this study, several classes of markers based on genotyping (SSR and ISJ) and sequencing (Sanger and NGS) were used to confirm hybridization and its direction, and to determine the prospective parent species. Analysis of ISJ and ISSR genotyping data revealed that all amplified loci were polymorphic. The hybrid species was characterized by only 3 specific bands, and it …


Molecular Characterization Of Edible Pea Through Est-Ssr Markers, Mohammad Nisar, Asaf Khan, Syed Fazal Wadood, Aftab Ali̇ Shah, Fati̇h Hanci Jan 2017

Molecular Characterization Of Edible Pea Through Est-Ssr Markers, Mohammad Nisar, Asaf Khan, Syed Fazal Wadood, Aftab Ali̇ Shah, Fati̇h Hanci

Turkish Journal of Botany

The genetic diversity among 23 newly developed homosegregate pea lines (Pisum sativum L.) was assessed with a total of 13 expressed sequence tag (EST) based-simple sequence repeat (SSR) markers. The percentages of amplified and nonamplified primers were 92% and 8%, respectively, and 58.33% of the used primers gave the PCR product within the reported size range while 41.66% of primers gave a different product size. Polymorphism information content (PIC), major allele frequency, and variation in genetic diversity were calculated. The PIC ranged from 0.32 to 0.63 with an average of 0.50. Major allele frequency ranged from 0.48 to 0.78 with …


Assessment Of Genetic Diversity Of Rose Genotypes Using Issr Markers, Ti̇jen Oğraş, Evren Koban Baştanlar, Özge Karakaş Meti̇n, İrfan Kandemi̇r, Hasan Özçeli̇k Jan 2017

Assessment Of Genetic Diversity Of Rose Genotypes Using Issr Markers, Ti̇jen Oğraş, Evren Koban Baştanlar, Özge Karakaş Meti̇n, İrfan Kandemi̇r, Hasan Özçeli̇k

Turkish Journal of Botany

The genus Rosa L. (Rosaceae) is an important ornamental crop with a high economic value in floriculture, cosmetics, and pharmaceutical industries. Turkey is an important country in rose cultivation with unique species and cultivars, especially for rose oil production. Breeding programs of different rose genotypes are crucial for the development of new commercial varieties. In this study, genetic relationships among the old rose cultivars locally grown in Isparta were assessed by DNA fingerprinting. Inter-simple sequence repeats markers (ISSRs) were used to investigate the genetic diversity among nineteen locally grown rose genotypes. Nineteen ISSR primers yielded a total of 413 scorable …


Determining Diurnal And Seasonal Changes In Melatonin Andtryptophan Contents Of Eggplant (Solanum Melongena L.), Ahmet Korkmaz, Gökçen Yakupoğlu, Şebnem Köklü, Yakup Cuci̇, Feri̇t Kocaçi̇nar Jan 2017

Determining Diurnal And Seasonal Changes In Melatonin Andtryptophan Contents Of Eggplant (Solanum Melongena L.), Ahmet Korkmaz, Gökçen Yakupoğlu, Şebnem Köklü, Yakup Cuci̇, Feri̇t Kocaçi̇nar

Turkish Journal of Botany

The objective of this study was to simultaneously determine changes in tryptophan and melatonin contents of eggplant seedlings at two different growth stages during a 24-h period. Variations in tryptophan and melatonin levels in different organs (roots, leaves, fruits, and seeds) and the distribution and accumulation of these molecules in these organs during various growth stages were also investigated. In eggplant seedlings, melatonin showed a strong peak at the beginning of the dark period, while tryptophan levels were at the lowest. Melatonin was also high in the middle of the light period and an inverse relationship was observed between melatonin …


Karyotype Analysis Of Some Taxa Of Dianthus Section Verruculosi (Caryophyllaceae, Sileneae), Derya Altay, Hali̇l Erhan Eroğlu, Ergi̇n Hamzaoğlu, Murat Koç Jan 2017

Karyotype Analysis Of Some Taxa Of Dianthus Section Verruculosi (Caryophyllaceae, Sileneae), Derya Altay, Hali̇l Erhan Eroğlu, Ergi̇n Hamzaoğlu, Murat Koç

Turkish Journal of Botany

The purpose of this study was to determine chromosome numbers and karyological features of six Dianthus taxa belonging to section Verruculosi from Anatolia, Turkey. The chromosome numbers were determined as 2n = 30 in all taxa. Karyological measurements were made in detail for the first time for all taxa. Chromosome counts were given for the first time for all taxa except D. cyri and D. strictus. A new chromosome number was determined for D. strictus. The intrachromosomal and interchromosomal karyotype asymmetries were estimated with MCA and CVCL values.


Taxonomy Of Poa Jubata And A New Section Of The Genus (Poaceae), Evren Cabi̇, Robert John Soreng, Lynn Gillespie Jan 2017

Taxonomy Of Poa Jubata And A New Section Of The Genus (Poaceae), Evren Cabi̇, Robert John Soreng, Lynn Gillespie

Turkish Journal of Botany

Poa jubata A.Kern. is an ephemeral, southeastern European species of which little is known. A molecular phylogenetic analysis of Poa L., including all previously identified major lineages, shows this species to be isolated, with a genotype here designated as J (plastid) j (nrDNA). It is assigned to the monotypic P. sect. Jubatae sect. nov. The section is differentiated from other Poa sections in having 5-nerved upper glumes, very narrow palea flanges, an annual habit, and erect solitary culms. Poa jubata occurs along coastal regions of the Balkans and is rather rare. Two new collections were made in 2015 in Thrace, …


Evaluating The Utility Of Rbcl In Identifying Nigerian Speciesof The Genus Afzelia Sm. (Fabaceae; Caesalpinioideae), Aramide Oshingboye, George Nodza, Temitope Onuminya, Oluwatoyin Ogundipe Jan 2017

Evaluating The Utility Of Rbcl In Identifying Nigerian Speciesof The Genus Afzelia Sm. (Fabaceae; Caesalpinioideae), Aramide Oshingboye, George Nodza, Temitope Onuminya, Oluwatoyin Ogundipe

Turkish Journal of Botany

The genus Afzelia Sm. (Fabaceae) represents one of the most useful tree species in tropical Africa. These trees have huge socioeconomic and ecological importance, but are under serious threat from incessant exploitation. This has caused a decline of the species in the wild; several species are now registered as threatened and endangered in the IUCN red list. However, conserving this species for posterity has been hampered by the complexity of morphological characters that exist among Afzelia species. In our study, we evaluated the utility of rbcL as a single barcode region, exploring its performance to accurately identify Nigerian Afzelia species …


Bioaccumulation And Oxidative Stress Impact Of Pb, Ni, Cu, And Cr Heavy Metals In Two Bryophyte Species, Pleurochaete Squarrosa And Timmiella Barbuloides, Serap Aydoğan, Bengi̇ Erdağ, Lale Aktaş Jan 2017

Bioaccumulation And Oxidative Stress Impact Of Pb, Ni, Cu, And Cr Heavy Metals In Two Bryophyte Species, Pleurochaete Squarrosa And Timmiella Barbuloides, Serap Aydoğan, Bengi̇ Erdağ, Lale Aktaş

Turkish Journal of Botany

This study was conducted to evaluate the bioaccumulation and oxidative stress impact of lead (Pb), nickel (Ni), copper (Cu), and chromium (Cr) in bryophyte species Pleurochaete squarrosa and Timmiella barbuloides exposed to Pb, Ni, Cu, and Cr at 1 mM concentration for 48 h. Bioaccumulation ratios in the non-Fenton metals Ni and Pb were found to be higher than in Fenton metals Cu and Cr for both moss species. Except for Cu, high levels of heavy metal accumulation caused a slight increase in dry weights of both species. Total chlorophyll and carotenoid contents of both species showed variations under Ni, …