Life Sciences Commons^™

Using Yeast Two-Hybrid System And Molecular Dynamics Simulation To Detect Venom Protein-Protein Interactions, Ying Jia, Paulina Kowalski, Ivan Lopez

Biology Faculty Publications and Presentations

Proteins and peptides are major components of snake venom. Venom protein transcriptomes and proteomes of many snake species have been reported; however, snake venom complexity (i.e., the venom protein-protein interactions, PPIs) remains largely unknown. To detect the venom protein interactions, we used the most common snake venom component, phospholipase A2s (PLA2s) as a “bait” to identify the interactions between PLA2s and 14 of the most common proteins in Western diamondback rattlesnake (Crotalus atrox) venom by using yeast two-hybrid (Y2H) analysis, a technique used to detect PPIs. As a result, we identified PLA2s interacting with themselves, and lysing-49 PLA2 …

The Multifunctional Roles Of Polyphenols In Plant-Herbivore Interactions, Sukhman Singh, Ishveen Kaur, Rupesh R. Kariyat

Biology Faculty Publications and Presentations

There is no argument to the fact that insect herbivores cause significant losses to plant productivity in both natural and agricultural ecosystems. To counter this continuous onslaught, plants have evolved a suite of direct and indirect, constitutive and induced, chemical and physical defenses, and secondary metabolites are a key group that facilitates these defenses. Polyphenols—widely distributed in flowering plants—are the major group of such biologically active secondary metabolites. Recent advances in analytical chemistry and metabolomics have provided an opportunity to dig deep into extraction and quantification of plant-based natural products with insecticidal/insect deterrent activity, a potential sustainable pest management strategy. …

Molecular Characterization Of A Marine Turtle Tumor Epizootic, Profiling External, Internal And Postsurgical Regrowth Tumors, Kelsey Yetsko, Jessica A. Farrell, Nicholas B. Blackburn, Liam Whitmore, Maximilian R. Stammnitz, Jenny Whilde, Catherine B. Eastman, Devon Rollinson Ramia, Ana C. Leandro

School of Medicine Publications and Presentations

Sea turtle populations are under threat from an epizootic tumor disease (animal epidemic) known as fibropapillomatosis. Fibropapillomatosis continues to spread geographically, with prevalence of the disease also growing at many longer-affected sites globally. However, we do not yet understand the precise environmental, mutational and viral events driving fibropapillomatosis tumor formation and progression.

Here we perform transcriptomic and immunohistochemical profiling of five fibropapillomatosis tumor types: external new, established and postsurgical regrowth tumors, and internal lung and kidney tumors. We reveal that internal tumors are molecularly distinct from the more common external tumors. However, they have a small number of conserved potentially …

Tropical Milkweed Herbivore And Predator Dynamics In Suburban South Texas, Daniela Rivera, Jose Adrian Noval, Lilly Elliott, Hannah J. Penn

Biology Faculty Publications and Presentations

Tropical milkweed is commonly grown to conserve pollinators, but the presence of non-caterpillar herbivores may prompt treatment. Management is limited to non-chemical methods like biological control, but potential natural enemies have not been well studied in the Lower Rio Grande Valley (LRGV). We documented the arthropod community on tropical milkweed in garden and potted settings then analyzed associations between organisms. In the garden, oleander aphids and large milkweed bugs were the primary herbivores, overlapping on seedpods. Natural enemies (lady beetles, syrphid fly larvae, and aphid parasitoids) were positively associated with oleander aphids but not milkweed bugs. The arthropod community experienced …

Weeds As Hosts Of Plant Parasitic Nematodes In Subtropical Agriculture Systems, Habraham F. Lopez, Pushpa Soti, Ganpati B. Jagdale, Parwinder Grewal, Alexis Racelis

Biology Faculty Publications and Presentations

With a nearly year-round growing season, tropical and subtropical regions are plagued with a myriad of agro-nomic challenges, including near-continuous weeds and invertebrate pests including plant-parasitic nematodes (PPNs). A poor understanding of the presence and geographical distributions of these pests complicate their man-agement, especially in organic farming systems. This work attempts to document the interaction of PPNs with the major weeds in the semi-arid region of south Texas. Five organically managed farms were surveyed for four weeds of regional agronomic importance including silverleaf nightshade (Solanum elaeagnifolium), common sunflower (Helianthus annuus), false ragweed (Parthenium hysterophorus), and London rocket (Sisymbrium irio). Soil …

Type Vi Secretion System Mutations Reduced Competitive Fitness Of Classical Vibrio Cholerae Biotype, Benjamin Kostiuk, Francis J. Santoriello, Laura Diaz-Satizabal, Fabiana Bisaro, Kyung-Jo Lee, Anna N. Dhody, Daniele Provenzano, Daniel Unterweger, Stefan Pukatzki

Biology Faculty Publications and Presentations

The gram-negative bacterium Vibrio cholerae is the causative agent of the diarrhoeal disease cholera and is responsible for seven recorded pandemics. Several factors are postulated to have led to the decline of 6th pandemic classical strains and the rise of El Tor biotype V. cholerae, establishing the current 7th pandemic. We investigated the ability of classical V. cholerae of the 2nd and 6th pandemics to engage their type six secretion system (T6SS) in microbial competition against non-pandemic and 7th pandemic strains. We report that classical V. cholerae underwent sequential mutations in T6SS genetic determinants that initially exposed 2nd pandemic …

Rivfishtime: A Global Database Of Fish Time-Series As A Currency For Global Change Ecology Research In Riverine Systems, Lise Comte, Juan Carvajal-Quintero, Pablo A. Tedesco, Ulrich Brose, Tibor Erős, Ana F. Filipe, Marie-Josée Fortin, Katie Irving, Claire Jacquet, Christopher M. Taylor

Biology Faculty Publications and Presentations

Motivation

We compiled a global database of long-term riverine fish surveys from 46 regional and national monitoring programmes and from individual academic research efforts, with which numerous basic and applied questions in ecology and global change research can be explored. Such spatially and temporally extensive datasets have been lacking for freshwater systems in comparison to terrestrial ones.

Main types of variables contained

The database includes 11,386 time-series of riverine fish community catch data, including 646,270 species-specific abundance records, together with metadata related to the geographical location and sampling methodology of each time-series.

Spatial location and grain

The database contains 11,072 …

Aprendizaje Activo Y Pedagogía Culturalmente Relevante En Stem: Tres Lecciones Aprendidas Dentro Y Fuera Del Aula, Teresa Patricia Feria-Arroyo

Biology Faculty Publications and Presentations

Uno de los mayores desafíos en la ciencia, la tecnología, la ingeniería y la educación matemática (STEM, por sus siglas en inglés) es mejorar el rendimiento y la retención de estudiantes de diversos orígenes. Existen grandes diferencias entre los logros académicos de los estudiantes de minorías subrepresentadas (EMS) con aquellos que no pertenecen a estas minorías. Las diferencias inician desde el kínder y continúan hasta los estudios de posgrado. El aprendizaje activo y la pedagogía culturalmente sensible/relevante han mostrado resultados exitosos minimizando estas diferencias educacionales. Desafortunadamente, el aprendizaje activo y la pedagogía culturalmente relevante no son métodos comunes de enseñanza …

A Fresh Start In Ambersnail (Gastropoda: Succineidae) Taxonomy: Finding A Foothold Using A Widespread Species Of Oxyloma, Kathryn E. Perez, Marco A. Martinez Cruz, Brent W. Steury, Gary M. Barker

Biology Faculty Publications and Presentations

The ambersnails (Succineidae), found nearly worldwide, are considered a very challenging group to classify and identify with even genus-level identifications requiring dissection. In this study, we use mitochondrial and nuclear DNA markers, shell morphometrics, and anatomical dissection to examine fresh material collected from the type localities of two nominal species in Oxyloma (Neoxyloma). We conclude from these evidence that Oxyloma salleanum (L. Pfeiffer, 1850) and Oxyloma effusum (L. Pfeiffer, 1853) are conspecific, and accordingly reduce O. effusum to the status of junior synonymy. We present a redescription of O. salleanum.