Life Sciences Commons^™

Trash Talk: The Effects Of Plastic Pollution On Seabirds In Narragansett Bay, Erin A. O'Neill

Pell Scholars and Senior Theses

Plastic pollution in the ocean is a global concern with more than 8 million tons of plastic dumped into our oceans every year. This policy paper assesses plastic pollution in Narragansett Bay and the negative implications it holds on local seabird populations. Also, essential background information on plastic production and throwaway culture is provided. Moreover, the biological significance of seabirds is described, highlighting the vital role such populations play in local ecosystems such as Narragansett Bay. This paper contributes research to the global issue of plastic pollution by observing declining native wildlife life populations, such as seabirds, on a local …

Relationships Among Biodiversity Dimensions Of Birds In Nebraska, Nadejda Mirochnitchenko

School of Natural Resources: Dissertations, Theses, and Student Research

Biological diversity, or biodiversity, is a multi-dimensional concept that can be decomposed to measure information about taxonomic, phylogenetic, and functional variation within communities. Although the dimensions of biodiversity are interrelated, the assumption that measuring one dimension of diversity can inform about patterns in another dimension does not necessarily follow from theory or empirical study. The relationships among biodiversity dimensions is not well understood, nor how differences among dimensions could influence conservation decision making. Using the avian community as a study system, we explored the relationships of breadth metrics from the taxonomic, phylogenetic, and functional dimensions among each other and across …

Bats Of Saint Lucia, Lesser Antilles, Scott C. Pedersen, Gary G. Kwiecinski, Hugh H. Genoways, Roxanne J. Larsen, Peter A. Larsen, Carleton J. Phillips, Robert J. Baker

University of Nebraska State Museum: Mammalogy Papers

Eight species of bat have been previously recorded from the island of Saint Lucia: Noctilio leporinus, Monophyllus plethodon, Artibeus jamaicensis, Brachyphylla cavernarum, Ardops nichollsi, Sturnira paulsoni, Molossus molossus, and Tadarida brasiliensis. Herein, we add a ninth species to the fauna—Pteronotus davyi. These nine species represent nine genera from four families: Noctilionidae, Mormoopidae, Phyllostomidae, and Molossidae. This fauna includes four trophic guilds: N. leporinus (piscivore/insectivore), M. plethodon (nectarivore/pollenivore), A. jamaicensis × schwartzi, B. cavernarum, A. nichollsi, and S. paulsoni (frugivores), and P. davyi, M. molossus, and …

Constructing A Data-Based Mortality Profile For Avian Tower Kills At Telecommunication Towers In Illinois, Rachel Dipietro

Theses and Dissertations

During spring and fall seasons, Neotropical migratory passerines travel nocturnally across the Western Hemisphere between their wintering and breeding grounds, often encountering man-made threats. One hazard that has gained considerable publicity in recent decades is the communication tower. While there have been many tower kill studies recorded, there has been no attempt at predicting the risk of towers based on their different attributes (e.g., height, type of light, landscape placement) spatially on a regional scale. The objective of this study was to create seasonal mortality profile maps in GIS for Illinois, based on tower attributes combined with key factors such …

Cryptic Diversity In The Mexican Highlands: Thousands Of Uce Loci Help Illuminate Phylogenetic Relationships, Species Limits And Divergence Times Of Montane Rattlesnakes (Viperidae: Crotalus ), Christopher Blair, Robert W. Bryson Jr, Charles W. Linkem, David Lazcano, John Klicka, John E. Mccormack

Publications and Research

With the continued adoption of genome‐scale data in evolutionary biology comes the challenge of adequately harnessing the information to make accurate phylogenetic inferences. Coalescent‐based methods of species tree inference have become common, and concatenation has been shown in simulation to perform well, particularly when levels of incomplete lineage sorting are low. However, simulation conditions are often overly simplistic, leaving empiricists with uncertainty regarding analytical tools. We use a large ultraconserved element data set (>3,000 loci) from rattlesnakes of the Crotalus triseriatus group to delimit lineages and estimate species trees using concatenation and several coalescent‐based methods. Unpartitioned and partitioned maximum …

A Glimpse Into The Ecological Communities Of Camp Greenwood, Rachael Noteboom

Honors Projects

There is a Presbyterian summer camp near Greenville, Michigan that is home to beautiful wetlands with a variety of wildlife. This camp is nestled between multiple larger connected lakes and surrounded by many large waterfront properties. The number of campers has dwindled in recent years and the council in charge of the land is desperate to sell the most ecologically important sections of the camp, if not all of the land, to developers for multi-million dollar price tags. My dad is on the committee trying to convince the council and the community to save the camp from development.

I surveyed …

13 Terrestrial Wetlands, Randall Kolka, Carl T Trettin

USGS Northern Prairie Wildlife Research Center

The objective of this chapter is to characterize the distribution of carbon stocks and fluxes in terrestrial wetlands within North America. The approach was to synthesize available literature from field measurements with analyses of resource inventory data to estimate wetland area, carbon stocks, and net ecosystem exchange (NEE) of carbon and methane (CH4) fluxes of terrestrial wetlands (see Appendices 13A, p. 547, and 13B, p. 557, for details1). Then, the findings employed from large-scale simulation studies provided additional context, with consideration given to the effects of disturbance regimes, restoration and creation of terrestrial wetlands, and the application of modeling tools …

Urban Re-Greening: A Case Study In Multi-Trophic Biodiversity And Ecosystem Functioning In A Post-Industrial Landscape, Frank Gallagher, Nina M. Goodey, Diane Hagmann, Jay Prakash Singh, Claus Holzapfel, Megan Litwhiler, Jennifer Adams Krumins

Department of Chemistry and Biochemistry Faculty Scholarship and Creative Works

The biodiversity of urban and post-industrial ecosystems is a highly relevant and growing new frontier in ecological research. Even so, the functionality of these ecosystems may not always be successfully predicted based on prior biodiversity and ecosystem functioning theory. Indeed, evidence suggests that the general biological impoverishment within the urban context envisioned thirty years ago was overstated. Many of the world’s urban centers support some degree of biodiversity that is indigenous, as well as a complex array of non-native species, resulting in highly functional, and often, novel communities. For over two decades, a multi-disciplinary team has examined the sub-lethal impact …

Museum Metabarcoding: A Novel Method Revealing Gut Helminth Communities Of Small Mammals Across Space And Time, Stephen E. Greiman, Joseph A. Cook, Vasyl V. Tkach, Eric P. Hoberg, Damian M. Menning, Andrew G. Hope, Sarah A. Sonsthagen, Sandra L. Talbot

Harold W. Manter Laboratory of Parasitology: Faculty and Staff Publications

Natural history collections spanning multiple decades provide fundamental historical baselines to measure and understand changing biodiversity. New technologies such as next generation DNA sequencing have considerably increased the potential of museum specimens to address significant questions regarding the impact of environmental changes on host and parasite/pathogen dynamics. We developed a new technique to identify intestinal helminth parasites and applied it to shrews (Eulipotyphla: Soricidae) because they are ubiquitous, occupy diverse habitats, and host a diverse and abundant parasite fauna. Notably, we included museum specimens preserved in various ways to explore the efficacy of using metabarcoding analyses that may enable identification …

Resource Assessment Report Temperate Demersal Elasmobranch Resource Of Western Australia, Matias Braccini, Nick Blay, S. A. Hesp, Brett Molony

Fisheries research reports

This document provides a cumulative description and assessment of the TDER and all of the fishing activities (i.e. fisheries / fishing sectors) affecting this resource in WA. Future Resource Assessment Reports will assess the Statewide Sharks and Rays Resource. The report is focused on the temperate indicator species (whiskery, gummy, dusky and sandbar sharks) used to assess the suites of demersal sharks and rays that comprise this resource. These species are primarily captured by demersal gillnets used in the TDGDLF that operate in the West Coast and South Coast Bioregions. For the North Coast bioregion, no commercial fishing for sharks …

The European Union And The Establishment Of Marine Protected Areas In Antarctica, Nengye Liu

Research Collection Yong Pung How School Of Law

This paper examines how the EU can best use its powers to establish marine protected areas (MPAs) in Antarctica. It first discusses the EU’s role in Antarctic governance and legal basis for the EU’s actions, with particular focus on the pending Joined Cases C-625/15 and C-659/16 at the Court of Justice of the European Union. Secondly, the paper analyses the negotiation process of the EU’s MPA proposals in the Southern Ocean within the Commission for the Conservation of Antarctic Marine Living Resources. Thirdly, it provides suggestions regarding the EU’s potential actions that might help achieve proposed Antarctic MPAs.

Triatomines: Trypanosomatids, Bacteria, And Viruses Potential Vectors?, Caroline Barreto Viera, Yanna Reis Praça, Kaio Luis Da Silva Bentes, Paula Beatriz Santiago, Sofia Marcelino Martins Silva, Gabriel Dos Santos Silva, Flávia Nader Motta, Izabela Marques Dourado Bastos, Jaime Martins De Santana, Carla Nunes De Araújo

Harold W. Manter Laboratory: Library Materials

Triatominae bugs are the vectors of Chagas disease, a major concern to public health especially in Latin America, where vector-borne Chagas disease has undergone resurgence due mainly to diminished triatomine control in many endemic municipalities. Although the majority of Triatominae species occurs in the Americas, species belonging to the genus Linshcosteus occur in India, and species belonging to the Triatoma rubrofasciata complex have been also identified in Africa, the Middle East, South-East Asia, and in the Western Pacific. Not all of Triatominae species have been found to be infected with Trypanosoma cruzi, but the possibility of establishing vector transmission …

Landscape Genetics Reveal Broad And Fine‐Scale Population Structure Due To Landscape Features And Climate History In The Northern Leopard Frog (Rana Pipiens) In North Dakota, Justin M. Waraniak, Justin D. L. Fisher, Kevin Purcell, David M. Mushet, Craig A. Stockwell

USGS Northern Prairie Wildlife Research Center

Prehistoric climate and landscape features play large roles structuring wildlife populations. The amphibians of the northern Great Plains of North America present an opportunity to investigate how these factors affect colonization, migration, and current population genetic structure. This study used 11 microsatellite loci to genotype 1,230 northern leopard frogs (Rana pipiens) from 41 wetlands (30 samples/wetland) across North Dakota. Genetic structure of the sampled frogs was evaluated using Bayesian and multivariate clustering methods. All analyses produced concordant results, identifying a major east–west split between two R. pipiens population clusters separated by the Missouri River. Substructuring within the two major identified …

Landscape Genetics Reveal Broad And Fine‐Scale Population Structure Due To Landscape Features And Climate History In The Northern Leopard Frog (Rana Pipiens) In North Dakota, Justin M. Waraniak, Justin D.L. Fisher, Kevin Purcell, David M. Mushet, Craig A. Stockwell

USGS Northern Prairie Wildlife Research Center

Prehistoric climate and landscape features play large roles structuring wildlife populations. The amphibians of the northern Great Plains of North America present an opportunity to investigate how these factors affect colonization, migration, and current population genetic structure. This study used 11 microsatellite loci to genotype 1,230 northern leopard frogs (Rana pipiens) from 41 wetlands (30 samples/wetland) across North Dakota. Genetic structure of the sampled frogs was evaluated using Bayesian and multivariate clustering methods. All analyses produced concordant results, identifying a major east–west split between two R. pipiens population clusters separated by the Missouri River. Substructuring within the two major identified …

Multi-Element Fingerprinting Of Waters To Evaluate Connectivity Among Depressional Wetlands, Yuxiang Yuan, Xiaoyan Zhu, David M. Mushet, Marinus L. Otte

USGS Northern Prairie Wildlife Research Center

Establishing the connectivity among depressional wetlands is important for their proper management, conservation and restoration. In this study, the concentrations of 38 elements in surface water and porewater of depressional wetlands were investigated to determine chemical and hydrological connectivity of three hydrological types: recharge, flow-through, and discharge, in the Prairie Pothole Region of North America. Most element concentrations of porewater varied significantly by wetland hydrologic type (p < 0.05), and increased along a recharge to discharge hydrologic gradient. Significant spatial variation of element concentrations in surface water was observed in discharge wetlands. Generally, higher element concentrations occurred in natural wetlands compared to wetlands with known disturbances (previous drainage and grazing). Electrical conductivity explained 42.3% and 30.5% of the variation of all element concentrations in porewater and surface water. Non-metric multidimensional scaling analysis showed that the similarity decreased from recharge to flowthrough to discharge wetland in each sampling site. Cluster analysis confirmed that element compositions in porewater of interconnected wetlands were more similar to each other than to those of wetlands located farther away. Porewater and surface water in a restored wetland showed similar multi-element characteristics to natural wetlands. In contrast, depressional wetlands connected by seeps along a deactivated drain-tile path and a grazed wetland showed distinctly different multi-element characteristics compared to other wetlands sampled. Our findings confirm that the multi-element fingerprinting method can be useful for assessing hydro-chemical connectivity across the landscape, and indicate that element concentrations are not only affected by land use, but also by hydrological characteristics.

Contemporary Sunday Hunting Laws: Unnecessary Economic Roadblocks, Ripe For Repeal, Seamus Ovitt

William & Mary Environmental Law and Policy Review

In America, Sunday closing laws, laws restricting what activities individuals could engage in, date back to the early colonial period; those early laws, like much of North American jurisprudence, trace their roots to the laws that existed in England at the time. Historically, however, laws restricting the behavior of individuals, specifically on Sundays, date back thousands of years; initially, their language was tied directly to that of the Old Testament. As God declared:

[s]ix days shalt thou labour, and do all thy work: But the seventh day [is] the Sabbath of the Lord thy God: [in it] thou shalt not …

Notes On The Genera Buthacus, Compsobuthus, And Lanzatus With Several Synonymies And Corrections Of Published Characters (Scorpiones: Buthidae), František Kovařík

Euscorpius

The taxonomic position of Buthacus armasi Lourenço, 2013, B. clevai Lourenço, 2001, B. huberi Lourenço, 2001, B. maliensis Lourenço & Qi, 2007, B. nigerianus Lourenço & Qi, 2006, Compsobuthus andresi Lourenço, 2004, C. simoni Lourenço, 1999, C. tassili Lourenço, 2010, C. tofti Lourenço, 2001, C. williamsi Lourenço, 1999, and Sabinebuthus elegans Lourenço, 2001 is revised and fictitious characters in their original descriptions are discussed and corrected. Buthacus armasi Lourenço, 2013 is synonymized with Buthacus leptochelys (Ehrenberg, 1829) syn. n., B. huberi Lourenço, 2001 is confirmed to be a synonym of Buthacus occidentalis Vachon, 1953, B. maliensis Lourenço & Qi, …

Checklist Of Bloodfeeding Mites (Acari: Spinturnicidae) From The Wings Of Bats (Mammalia: Chiroptera) In The Manú Biosphere Reserve, Peru, Donald D. Gettinger

MANTER: Journal of Parasite Biodiversity

A survey collection of mites of the family Spinturnicidae from Peruvian bats includes 11 species of Periglischrus (acutisternus, gameroi, grandisoma, herrerai, hopkinsi, iheringi, micronycteridis, ojasti, paracutisternus, paravargasi, and ramirezi) and 2 Spinturnix (americanus and bakeri); almost all represent new locality records. This survey collection is available for further study at the following repositories: The Harold W. Manter Laboratory of Parasitology, University of Nebraska–Lincoln; the Field Museum of Natural History, Chicago; and the Laboratório de Espeleobiologia y Acarologia, Universidad Nacional Autónoma de México. When spinturnicid mites are …

Ten Years Tracking The Migrations Of Small Landbirds: Lessons Learned In The Golden Age Of Bio-Logging, Emily A. Mckinnon, Oliver P. Love

Great Lakes Institute for Environmental Research Publications

In 2007, the first miniature light-level geolocators were deployed on small landbirds, revolutionizing the study of migration. In this paper, we review studies that have used geolocators to track small landbirds with the goal of summarizing research themes and identifying remaining important gaps in understanding. We also highlight research and opportunities using 2 recently developed tracking technologies: archival GPS tags and automated radio-telemetry systems. In our review, we found that most (54%) geolocator studies focused on quantifying natural history of migration, such as identifying migration routes, nonbreeding range, and migration timing. Studies of behavioral ecology (20%) uncovered proximate drivers of …

Reframing The Sustainable Development Goals To Achieve Sustainability In The Anthropocene — A Systems Approach, Michelle Mei Ling Lim, Peter Sogaard Jorgensen, Carina Wyborn

Research Collection Yong Pung How School Of Law

Griggs et al. (2013) redefine sustainable development as “development that meets the needs of the present while safeguarding Earth’s life-support system, on which the welfare of current and future generations depend.” We recommend this as the end goal that the United Nations sustainable development goals (SDGs) should strive to achieve. Integration across the SDGs is less than what is required from a science perspective. Effective implementation of the SDGs will require States to attend to trade-offs and overlaps. We argue that continuous failure to address integration within the SDGs will jeopardize realization of this ultimate end goal. Therefore, we adopt …

Expanding Instream Flows To Protect Ecosystems In Overallocated River Basins, Belize A. Lane, David E. Rosenberg

Reports

Utahns are expressing a rapidly growing interest in protecting and enhancing instream flows for outdoor recreation and environmental benefits (Endter-Wada et al. 2015). However, many Utah rivers are already over-allocated for agricultural, municipal, hydropower and other water uses, making it difficult to procure additional water for instream flows. ‘Use it or lose it’ western water law and mentality encourages Utahns to use water rather than return it to rivers and ecosystems.

This briefing reviews existing instream flow practices allowed by the Utah water rights system and the challenges to implementation. We suggest key technical and legislative opportunities within and outside …

Fish Diversity And Distribution In The Seagrass-Coral Reef Continuum At Two Sites Off The Western Coast Of Isla Bastimentos, Bocas Del Toro, Panama, Kathy Liu

Independent Study Project (ISP) Collection

Coral reefs are the most diverse marine ecosystem and the largest biogenic structure on Earth. They serve as shelter for many reef fishes and are a food source for resident and visiting fish species. In the tropics, coral reefs are often in close proximity to seagrass beds and the two contiguous marine habitats are not only highly interconnected but also highly understudied. The seagrass-coral reef continuum offers a wide array of services to human society as well as to various life stages of reef fishes resulting in diel, temporal, or yearly migrations of fish between the two habitats. Tropical reef …

A Catalog Of Orchid Species And Their Distribution In Mazumbai Forest Reserve, Tanga Region, Tanzania, Sierra Loomis

Independent Study Project (ISP) Collection

Although orchids are common in Mazumbai Forest Reserve (MFR), there are limited resources on where they grow and how to identify them. The primary objective of this study is to create an updated catalog of orchids in MFR, using species abundance, richness and diversity of the orchids as indicators of where orchids prefer to grow in MFR. Orchid species vary greatly as altitude changes, making it important to survey orchids across different altitudes. Therefore, Mazumbai Forest was split into five different altitudinal bands spanning 1400 – 1900m and six 100 x 20m plots in each band were surveyed for both …

Correlations Between Reef Health And Vertical Zonation On Ushongo Village Reef And Fungu Zinga Reef, Daniel Gates

Independent Study Project (ISP) Collection

While the existence of vertical zonation on coral reefs is well-known, the driving mechanisms and the influence each has is not clear. This study seeks to investigate the influence of reef health on vertical zonation. Reef health is used as a potential factor since it is essentially a broad description of reef diversity. Therefore, a healthy reef which is very diverse is likely to have more and different interspecies interactions than an unhealthy one. This project investigates whether these altered interactions results in different depth distributions of various coral types, categorized broadly by colony shape. Reef health did not seem …

Large Mammals Of The High Andes A Survey Of Community Composition And Habitat Usage In The Highlands Of Angochagua, Sage Fox

Independent Study Project (ISP) Collection

The large mammal community of the high Andes may be the least understood in South America. It contains multiple threatened and charismatic species including the Andean Bear, Mountain Tapir, Red Brocket Deer, Northern Pudu, and Puma. Many of these species are lacking in distribution and population data. The highlands of the Parroquia de Angochagua were once overgrazed by livestock, but have been mostly restored over the last 20 years through conservation efforts by the local community. These highlands are thought to have populations of all the previously mentioned species, though they had not been surveyed before this study. Transect surveys …

Pemban Farmer Agency In Adapting To Climate Change, Rachael Hood

Independent Study Project (ISP) Collection

As a result of climate change, agricultural societies will be challenged by a variety of altered conditions, including increased severe weather events, saltwater intrusion, pest and disease outbreaks, and higher temperatures. The island of Pemba, in the Zanzibar archipelago, is home to many small-scale agriculturalists. During this study, I interviewed Pemban farmers in the districts of Wete and Micheweni about their awareness of the impacts of climate change and the mitigation strategies that they have implemented. The results from Pemba were compared to relevant academic literature regarding climate change to explore whether disparities exist between models of climate change in …

The Value Of Chemical Defense: The Effects Of Toxin Milking On The Physical, Physiological, And Behavioral Performance Of Cane Toads (Rhinella Marina), Ryann Blennerhassett

Independent Study Project (ISP) Collection

Amphibians have cutaneous glands on their skin which produce a number of toxic compounds that serve as protection against predators and microorganisms. Cane toads (Rhinella marina) have large parotoid glands located on their shoulders to store toxins, many of which are derived from lipids and are thus energetically expensive to produce. I used a combination of field and laboratory studies to investigate behavioral and physiological consequences of toxin loss and replenishment in cane toads. In a cross-sectional study, free-ranging toads were euthanized and dissected to identify correlations between toxin content and morphology /physiology. Experimental manipulations (manually expressing toxin from glands) …

Three New Chaerilus From Malaysia (Tioman Island) And Thailand (Scorpiones: Chaerilidae), With A Review Of C. Cimrmani, C. Sejnai, And C. Tichyi, František Kovařík, Graeme Lowe, František Šťáhlavský

Euscorpius

Chaerilus majkusi sp. n. from Malaysia (Tioman Island), C. neradorum sp. n. and C. stockmannorum sp. n. from Thailand are described and fully illustrated with color photographs of live and preserved specimens, as well as of their habitat. They are compared to the species C. cimrmani Kovařík, 2012, C. sejnai Kovařík, 2005, and C. tichyi Kovařík, 2000, which we also illustrate with color photographs of live unpublished specimens. Hemispermatophores of C. cimrmani, C. majkusi sp .n., C. stockmannorum sp. n., and C. tichyi are illustrated and compared, and we also describe the karyotypes of C. cimrmani, C. …

Survival At The Summits: Amphibian Responses To Thermal Extremes, Disease, And Rapid Climate Change In The High Tropical Andes, Kelsey E. Reider

FIU Electronic Theses and Dissertations

Understanding biological responses to climate change is a primary concern in conservation biology. Of the ecosystems being rapidly impacted by climate change, those in the high-elevation tropics are among the most poorly studied. The tropical Andean biosphere includes record elevations above 5000 meters, where extreme environmental conditions challenge many organisms. In the Cordillera Vilcanota of southern Peru, frogs including Pleurodema marmoratum and Telmatobius marmoratus have expanded their ranges to 5244 – 5400 m into habitats created by glacial recession, making them among the highest recorded amphibians on Earth. To understand how hydrologic alterations from loss of glacial meltwater and climatic …

Acarine Biodiversity In Ecuador: Two New Species Of Endoparasitic Chiggers (Acarina: Trombiculidae) From Terrestrial Andean Anurans, Ricardo Guerrero, Mario Humberto Yánez-Muñoz

MANTER: Journal of Parasite Biodiversity

Two species of endoparasitic chiggers, Vercammenia neotropica n. sp. and Microtrombicula ecuadorensis n. sp., are described, both found in terrestrial anurans of the genus Pristimantis collected in the Andes of Ecuador. A new combination is proposed for Trombicula yorkei Sambon, 1928 as Microtrombicula yorkei (Sambon, 1928) n. comb., and Schoengastia lynni Ewing, 1942 is placed as incertae sedis. This is the first record of species of the genus Vercammenia in the Neotropical region.

Resumen

Dos especies de ácaros endoparásitos, Vercammenia neotropica n. sp. y Microtrombicula ecuadorensis n. sp., son descritas, ambas encontradas en anuros terrestres del género Pristimantis …