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Biochemistry, Biophysics, and Structural Biology

Clemson University

Fluorescence

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Full-Text Articles in Life Sciences

Intrinsically Disordered Proteins And Their Role In Biomolecular Condensates, Danielle Latham May 2024

Intrinsically Disordered Proteins And Their Role In Biomolecular Condensates, Danielle Latham

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Proteins are biomacromolecules responsible for the functions of life. While classically proteins are thought to be well structured in order to perform a specific function, 50% of proteins within Eukaryotic cells contain intrinsically disordered regions (IDRs), regions with no well-defined structure. IDRs are often used for cell signaling, responding to external factors such as temperature changes or the presence of small molecules. To understand how IDRs can function without structure, it is important to understand the dynamics of such systems. Understanding IDR intramolecular and intermolecular interactions will shed light on IDR dynamics. Intramolecular interactions are first explored using fluorescence spectroscopy …


Dendrimer Supramolecular Assembly For Gene Delivery, Karthikeyan Pasupathy Jul 2008

Dendrimer Supramolecular Assembly For Gene Delivery, Karthikeyan Pasupathy

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Dendrimers have found many applications in the fields of polymer science, biophysics, nanomedicine and the petroleum industry. Poly(amidoamine) (PAMAM) was studied as a model dendrimer and squalane as a model hydrocarbon. The interaction between PAMAM and squalane is pH dependent. Specifically, at low or neutral pH the squalane is found on the periphery of the PAMAM while at high pH the hydrocarbon is entrapped inside the PAMAM molecules.

Single-molecule fluorescence revealed that the interaction between PAMAM and squalane is reversible. At a pH value of 8, the time constants for the approaching, binding and dissociation of single PAMAM to squalane …