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Computer Engineering Commons

Open Access. Powered by Scholars. Published by Universities.®

2017

Virginia Commonwealth University

Cancer pathways

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Full-Text Articles in Computer Engineering

Quadmutex: Quadratic Driver Mutation Explorer, Bokhari Yahya, Tomasz Jakub Arodz Jan 2017

Quadmutex: Quadratic Driver Mutation Explorer, Bokhari Yahya, Tomasz Jakub Arodz

Computer Science Publications

Background

Somatic mutations accumulate in human cells throughout life. Some may have no adverse consequences, but some of them may lead to cancer. A cancer genome is typically unstable, and thus more mutations can accumulate in the DNA of cancer cells. An ongoing problem is to figure out which mutations are drivers - play a role in oncogenesis, and which are passengers - do not play a role. One way of addressing this question is through inspection of somatic mutations in DNA of cancer samples from a cohort of patients and detection of patterns that differentiate driver from passenger mutations. …