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A Simple Contact Mapping Algorithm For Identifying Potential Peptide Mimetics In Protein–Protein Interaction Partners, Alex Krall, Jonathan Brunn, Spandana Kankanala, Michael H. Peters
A Simple Contact Mapping Algorithm For Identifying Potential Peptide Mimetics In Protein–Protein Interaction Partners, Alex Krall, Jonathan Brunn, Spandana Kankanala, Michael H. Peters
Computer Science Publications
A simple, static contact mapping algorithm has been developed as a first step at identifying potential peptide biomimetics from protein interaction partner structure files. This rapid and simple mapping algorithm, “OpenContact” provides screened or parsed protein interaction files based on specified criteria for interatomic separation distances and interatomic potential interactions. The algorithm, which uses all-atom Amber03 force field models, was blindly tested on several unrelated cases from the literature where potential peptide mimetics have been experimentally developed to varying degrees of success. In all cases, the screening algorithm efficiently predicted proposed or potential peptide biomimetics, or close variations thereof, and …
Virtual Track: Applications And Challenges Of The Rfid System On Roads, Wei Cheng, Shengling Wang, Xiuzhen Cheng
Virtual Track: Applications And Challenges Of The Rfid System On Roads, Wei Cheng, Shengling Wang, Xiuzhen Cheng
Computer Science Publications
The RFID System on Roads (RSR), which includes RFID tags deployed on roads and RFID readers installed on vehicles, is an essential platform for future transportation systems. It can provide unique features that are missing from the current systems, including lane level position, road traffic control information, vehicle distance estimation, real time driving behavior analysis, and so on. Based on these features, several novel vehicular applications can be implemented, which can significantly improve the transportation safety and efficiency. Specifically, the proposed applications on RSR include Assisted Navigation Systems, Electrical Traffic Control, Unmanned Patrol Systems, Vehicle Distance Estimation, Parking Assistant System, …