Computer Engineering Commons^™

An Empirical Study On The Classification Of Python Language Features Using Eye-Tracking, Jigyasa Chauhan

Department of Computer Science and Engineering: Dissertations, Theses, and Student Research

Python, currently one of the most popular programming languages, is an object-
oriented language that also provides language feature support for other programming
paradigms, such as functional and procedural. It is not currently understood how
support for multiple paradigms affects the ability of developers to comprehend that
code. Understanding the predominant paradigm in code, and how developers classify
the predominant paradigm, can benefit future research in program comprehension as
the paradigm may factor into how people comprehend that code. Other researchers
may want to look at how the paradigms in the code interact with various code smells.
To investigate how …

A Robust Platform For Mobile Robotics Teaching And Developing Using Arduino’S Integrated Development Environment (Ide) For Programming The Arduino Mega 2560, Sajjad Alhassan

Department of Electrical and Computer Engineering: Dissertations, Theses, and Student Research

In light of the rapid pace at which development happens with modern technology, mobile robots play an important role in our daily lives. This is due to their great importance in facilitating the affairs of life in various economic, commercial, industrial, scientific, and many other fields. In this research and project, we have restructured the microcontroller and system for one of the mobile robots (CEENBOT) that was designed by the University of Nebraska and replaced it with an Arduino Mega 2560.

The purpose of using the Arduino Mega 2560 robot is to provide alternative programming for the CEENBOT platform to …

Attention In The Faithful Self-Explanatory Nlp Models, Mostafa Rafaiejokandan

Department of Computer Science and Engineering: Dissertations, Theses, and Student Research

Deep neural networks (DNNs) can perform impressively in many natural language processing (NLP) tasks, but their black-box nature makes them inherently challenging to explain or interpret. Self-Explanatory models are a new approach to overcoming this challenge, generating explanations in human-readable languages besides task objectives like answering questions. The main focus of this thesis is the explainability of NLP tasks, as well as how attention methods can help enhance performance. Three different attention modules are proposed, SimpleAttention, CrossSelfAttention, and CrossModality. It also includes a new dataset transformation method called Two-Documents that converts every dataset into two separate documents required by the …

Low Power Multi-Channel Interface For Charge Based Tactile Sensors, Samuel Hansen

Department of Electrical and Computer Engineering: Dissertations, Theses, and Student Research

Analog front end electronics are designed in 65 nm CMOS technology to process charge pulses arriving from a tactile sensor array. This is accomplished through the use of charge sensitive amplifiers and discrete time filters with tunable clock signals located in each of the analog front ends. Sensors were emulated using Gaussian pulses during simulation. The digital side of the system uses SAR (successive approximation register) ADCs for sampling of the processed sensor signals.

Adviser: Sina Balkır

A Stacking-Based Misbehavior Detection System In Vehicular Communication Networks, Troy Green

Department of Electrical and Computer Engineering: Dissertations, Theses, and Student Research

Over the past few decades communication systems for vehicles have continued to advance. Communications between these vehicles can be classified into safety related and non safety related messages. An example of a safety related message would be one vehicle warning others of an icy road it encountered, where a non safety related communication would be a passenger streaming a movie. In either case it's important to secure the communications so that the system continues to behave as expected. In this thesis we propose a Misbehavior Detection System (MDS), which is a system that monitors messages sent between vehicles, and detects …

A Low-Power, Low-Area 10-Bit Sar Adc With Length-Based Capacitive Dac, Zhili Pan

Department of Electrical and Computer Engineering: Dissertations, Theses, and Student Research

A 2.5 V single-ended 10-bit successive-approximation-register analog-to-digital converter (SAR ADC) based on the TSMC 65 nm CMOS process is designed with the goal of achieving low power consumption (33.63 pJ/sample) and small area (2874 µm^2 ). It utilizes a novel length-based capacitive digital-to-analog converter (CDAC) layout to achieve low total capacitance for power efficiency, and a custom static asynchronous logic to free the dependence on a high-frequency external clock source. Two test chips have been designed and the problems found through testing the first chip are analyzed. Multiple improved versions of the ADC with minor variations are implemented on the …

Learnfca: A Fuzzy Fca And Probability Based Approach For Learning And Classification, Suraj Ketan Samal

Department of Computer Science and Engineering: Dissertations, Theses, and Student Research

Formal concept analysis(FCA) is a mathematical theory based on lattice and order theory used for data analysis and knowledge representation. Over the past several years, many of its extensions have been proposed and applied in several domains including data mining, machine learning, knowledge management, semantic web, software development, chemistry ,biology, medicine, data analytics, biology and ontology engineering.

This thesis reviews the state-of-the-art of theory of Formal Concept Analysis(FCA) and its various extensions that have been developed and well-studied in the past several years. We discuss their historical roots, reproduce the original definitions and derivations with illustrative examples. Further, we provide …

Bevers: A General, Simple, And Performant Framework For Automatic Fact Verification, Mitchell Dehaven

Department of Computer Science and Engineering: Dissertations, Theses, and Student Research

Fact verification has become an important process, primarily done manually by humans, to verify the authenticity of claims and statements made online. Increasingly, social media companies have utilized human effort to debunk false claims on their platforms, opting to either tag the content as misleading or false, or removing it entirely to combat misinformation on their sites. In tandem, the field of automatic fact verification has become a subject of focus among the natural language processing (NLP) community, spawning new datasets and research. The most popular dataset is the Fact Extraction and VERification (FEVER) dataset. In this thesis an end-to-end …

Sequence-Based Bioinformatics Approaches To Predict Virus-Host Relationships In Archaea And Eukaryotes, Yingshan Li

Department of Computer Science and Engineering: Dissertations, Theses, and Student Research

Viral metagenomics is independent of lab culturing and capable of investigating viromes of virtually any given environmental niches. While numerous sequences of viral genomes have been assembled from metagenomic studies over the past years, the natural hosts for the majority of these viral contigs have not been determined. Different computational approaches have been developed to predict hosts of bacteria phages. Nevertheless, little progress has been made in the virus-host prediction, especially for viruses that infect eukaryotes and archaea. In this study, by analyzing all documented viruses with known eukaryotic and archaeal hosts, we assessed the predictive power of four computational …

A Pipeline To Generate Deep Learning Surrogates Of Genome-Scale Metabolic Models, Achilles Rasquinha

Department of Computer Science and Engineering: Dissertations, Theses, and Student Research

Genome-Scale Metabolic Models (GEMMs) are powerful reconstructions of biological systems that help metabolic engineers understand and predict growth conditions subjected to various environmental factors around the cellular metabolism of an organism in observation, purely in silico. Applications of metabolic engineering range from perturbation analysis and drug-target discovery to predicting growth rates of biotechnologically important metabolites and reaction objectives within dierent single-cell and multi-cellular organism types. GEMMs use mathematical frameworks for quantitative estimations of flux distributions within metabolic networks. The reasons behind why an organism activates, stuns, or fluctuates between alternative pathways for growth and survival, however, remain relatively unknown. GEMMs …

Computer Engineering Education, Marilyn Wolf

CSE Conference and Workshop Papers

Computer engineering is a rapidly evolving discipline. How should we teach it to our students?

This virtual roundtable on computer engineering education was conducted in summer 2022 over a combination of email and virtual meetings. The panel considered what topics are of importance to the computer engineering curriculum, what distinguishes computer engineering from related disciplines, and how computer engineering concepts should be taught.

Updated Perspectives On The Role Of Biomechanics In Copd: Considerations For The Clinician, Jennifer M. Yentes, Wai-Yan Liu, Kuan Zhang, Eric J. Markvicka, Stephen I. Rennard

Department of Electrical and Computer Engineering: Faculty Publications

Patients with chronic obstructive pulmonary disease (COPD) demonstrate extra-pulmonary functional decline such as an increased prevalence of falls. Biomechanics offers insight into functional decline by examining mechanics of abnormal movement patterns. This review discusses biomechanics of functional outcomes, muscle mechanics, and breathing mechanics in patients with COPD as well as future directions and clinical perspectives. Patients with COPD demonstrate changes in their postural sway during quiet standing compared to controls, and these deficits are exacerbated when sensory information (eg, eyes closed) is manipulated. If standing balance is disrupted with a perturbation, patients with COPD are slower to return to baseline …

Sers Spectroscopy With Machine Learning To Analyze Human Plasma Derived Sevs For Coronary Artery Disease Diagnosis And Prognosis, Xi Huang, Bo Liu, Shenghan Guo, Weihong Guo, Ke Liao, Guoku Hu, Wen Shi, Mitchell Kuss, Michael J. Duryee, Daniel R. Anderson, Yongfeng Lu, Bin Duan

Department of Electrical and Computer Engineering: Faculty Publications

Coronary artery disease (CAD) is one of the major cardiovascular diseases and represents the leading causes of global mortality. Developing new diagnostic and therapeutic approaches for CAD treatment are critically needed, especially for an early accurate CAD detection and further timely intervention. In this study, we successfully isolated human plasma small extracellular vesicles (sEVs) from four stages of CAD patients, that is, healthy control, stable plaque, non-ST-elevation myocardial infarction, and ST-elevation myocardial infarction. Surface-enhanced Raman scattering (SERS) measurement in conjunction with five machine learning approaches, including Quadratic Discriminant Analysis, Support Vector Machine (SVM), K-Nearest Neighbor, Artificial Neural network, were then …

Sers Spectroscopy With Machine Learning To Analyze Human Plasma Derived Sevs For Coronary Artery Disease Diagnosis And Prognosis, Xi Huang, Bo Liu, Shenghan Guo, Weihong Guo, Ke Liao, Guoku Hu, Wen Shi, Mitchell Kuss, Michael J. Duryee, Daniel R. Anderson, Yongfeng Lu, Bin Duan

Department of Electrical and Computer Engineering: Faculty Publications

Coronary artery disease (CAD) is one of the major cardiovascular diseases and represents the leading causes of global mortality. Developing new diagnostic and therapeutic approaches for CAD treatment are critically needed, especially for an early accurate CAD detection and further timely intervention. In this study, we successfully isolated human plasma small extracellular vesicles (sEVs) from four stages of CAD patients, that is, healthy control, stable plaque, non-ST-elevation myocardial infarction, and ST-elevation myocardial infarction. Surface-enhanced Raman scattering (SERS) measurement in conjunction with five machine learning approaches, including Quadratic Discriminant Analysis, Support Vector Machine (SVM), K-Nearest Neighbor, Artificial Neural network, were then …

Parasol: Efficient Parallel Synthesis Of Large Model Spaces, Clay Stevens, Hamid Bagheri

CSE Conference and Workshop Papers

Formal analysis is an invaluable tool for software engineers, yet state-of-the-art formal analysis techniques suffer from well-known limitations in terms of scalability. In particular, some software design domains—such as tradeoff analysis and security analysis—require systematic exploration of potentially huge model spaces, which further exacerbates the problem. Despite this present and urgent challenge, few techniques exist to support the systematic exploration of large model spaces. This paper introduces Parasol, an approach and accompanying tool suite, to improve the scalability of large-scale formal model space exploration. Parasol presents a novel parallel model space synthesis approach, backed with unsupervised learning to automatically derive …

Nonlinear Strong Coupling By Second-Harmonic Generation Enhancement In Plasmonic Nanopatch Antennas, Bryson Krause, Dhananjay Mishra, Jiyang Chen, Christos Argyropoulos, Thang Hoang

Department of Electrical and Computer Engineering: Faculty Publications

Enhanced electromagnetic fields within plasmonic nanocavity mode volumes enable multiple significant effects that lead to applications in both the linear and nonlinear optical regimes. In this work, we demonstrate enhanced second harmonic generation from individual plasmonic nanopatch antennas which are formed by separating silver nanocubes from a smooth gold film using a sub-10 nm zinc oxide spacer layer. When the nanopatch antennas are excited at their fundamental plasmon frequency, a 10⁴-fold increase in the intensity of the second harmonic generation wave is observed. Moreover, by integrating quantum emitters that have an absorption energy at the fundamental frequency, a …

Feed Forward Neural Networks With Asymmetric Training, Archit Srivastava

Department of Computer Science and Engineering: Dissertations, Theses, and Student Research

Our work presents a new perspective on training feed-forward neural networks(FFNN). We introduce and formally define the notion of symmetry and asymmetry in the context of training of FFNN. We provide a mathematical definition to generalize the idea of sparsification and demonstrate how sparsification can induce asymmetric training in FFNN.

In FFNN, training consists of two phases, forward pass and backward pass. We define symmetric training in FFNN as follows-- If a neural network uses the same parameters for both forward pass and backward pass, then the training is said to be symmetric.

The definition of asymmetric training in artificial …

A New Implementation Of Federated Learning For Privacy And Security Enhancement, Xiang Ma, Haijian Sun, Rose Qingyang Hu, Yi Qian

Department of Electrical and Computer Engineering: Faculty Publications

Motivated by the ever-increasing concerns on personal data privacy and the rapidly growing data volume at local clients, federated learning (FL) has emerged as a new machine learning setting. An FL system is comprised of a central parameter server and multiple local clients. It keeps data at local clients and learns a centralized model by sharing the model parameters learned locally. No local data needs to be shared, and privacy can be well protected. Nevertheless, since it is the model instead of the raw data that is shared, the system can be exposed to the poisoning model attacks launched by …

Feature Analysis Of Indus Valley And Dravidian Language Scripts With Similarity Matrices, Sarat Sasank Barla, Sai Surya Sanjay Alamuru, Peter Revesz

CSE Conference and Workshop Papers

This paper investigates the similarity between the Indus Valley script and the Kannada, Malayalam, Tamil, and Telugu scripts that are used to write Dravidian languages. The closeness of these scripts is determined by applying a feature analysis of each sign of these scripts and creating similarity matrices that describe the similarity of any pair of signs from two different scripts. The feature list that we use for the analysis of these Dravidian language-related scripts includes six new features beyond the thirteen features that were used for the study of Minoan Linear A and related scripts by Revesz. These new features …

A Novel Testbed For Evaluation Of Operational Technology Communications Protocols And Their On-Device Implementations, Matthew Boeding

Department of Electrical and Computer Engineering: Dissertations, Theses, and Student Research

Operational Technology (OT) and Infrastructure Technology (IT) systems are converging with the rapid addition of centralized remote management in OT systems. Previously air-gapped systems are now interconnected through the internet with application-specific protocols. This has led to systems that had limited access points being remotely accessible. In different OT sectors, legacy protocols previously transmitted over serial communication were updated to allow internet communication with legacy devices. New protocols such as IEC-61850 were also introduced for monitoring of different OT resources. The IEC-61850 standard’s Generic Object Oriented Substation Event (GOOSE) protocol outlines the representation and communication of a variety of different …

Femtosecond Laser Surface Processing To Create Self-Organized Micro- And Nano-Scale Features On Composite And Ceramic Materials, Nate Koeppe

Department of Electrical and Computer Engineering: Dissertations, Theses, and Student Research

Femtosecond laser surface processing (FLSP) is applied to a range of materials in this thesis. The materials studied were a carbon fiber reinforced polymer (CFRP), a thermosetting polymer, silicon nitride (Si₃N₄), and ceramic alumina. The CFRP is a composite material consisting of a thermosetting polymer and carbon fibers. The CFRP are referred to as a composite and the thermosetting polymer is referred to as a resin in this thesis. Alumina can exist in many different forms. The alumina used is 0.5 mm thick nonporous alumina sheets purchased from McMaster-Carr, and will be referred to as alumina …

Simulating Sub-Threshold Communication Channels Through Neurons, Richard Maina

Department of Computer Science and Engineering: Dissertations, Theses, and Student Research

Molecular Communication is an emerging paradigm with the potential to revolutionize the technology behind wearable and implantable devices and the broad range of functions they support, from tracking physical activity to medical diagnostics. This can be achieved through intra-body communication networks that take advantage of natural biological processes as a means of transmitting, propagating and receiving information. In this thesis we focus particularly on using the neuron as a means to facilitate information transfer for interconnected wearable or implantable devices through a technique known as sub-threshold electrical stimulation. We develop upon a prior work by introducing a linear model of …

Combining Solution Reuse And Bound Tightening For Efficient Analysis Of Evolving Systems, Clay Stevens, Hamid Bagheri

CSE Conference and Workshop Papers

Software engineers have long employed formal verification to ensure the safety and validity of their system designs. As the system changes—often via predictable, domain-specific operations—their models must also change, requiring system designers to repeatedly execute the same formal verification on similar system models. State-of-the-art formal verification techniques can be expensive at scale, the cost of which is multiplied by repeated analysis. This paper presents a novel analysis technique—implemented in a tool called SoRBoT—which can automatically determine domain-specific optimizations that can dramatically reduce the cost of repeatedly analyzing evolving systems. Different from all prior approaches, which focus on either tightening the …

Influence Of Aluminum Addition On The Laser Powder Bed Fusion Of Copper-Aluminum Mixtures, Nada Kraiem, Loic Constantin, A. Mao, Fei Wang, Bai Cui, Jean-François Silvain, Yongfeng Lu

Department of Electrical and Computer Engineering: Faculty Publications

The high optical reflectivity of copper (Cu) in the near infrared (NIR) domain and its elevated heat dissipation make Cu a challenging metal for laser powder bed fusion (LPBF), even with high energy densities (EDs). In this study, we demonstrated that adding aluminum (Al) powder by as little as 0.75, 1.5, and 3 wt.% substantially enhances Cu processability, leading to denser (up to 98%) and smoother (Ra = 3.3 𝜇m) Cu-Al parts as compared to 95% and 18 𝜇m, respectively, for the parts printed using pure Cu. In addition, this method reduces the ED required by a factor of two …

Consemblex: A Consensus-Based Transcriptome Assembly Approach That Extends Consemble And Improves Transcriptome Assembly, Richard Mwaba

Department of Computer Science and Engineering: Dissertations, Theses, and Student Research

An accurate transcriptome is essential to understanding biological systems enabling omics analyses such as gene expression, gene discovery, and gene-regulatory network construction. However, assembling an accurate transcriptome is challenging, especially for organisms without adequate reference genomes or transcriptomes. While several methods for transcriptome assembly with different approaches exist, it is still difficult to establish the most accurate methods. This thesis explores the different transcriptome assembly methods and compares their performances using simulated benchmark transcriptomes with varying complexity. We also introduce ConSemblEX to improve a consensus-based ensemble transcriptome assembler, ConSemble, in three main areas: we provide the ability to use any …

Asymmetric Control Of Light At The Nanoscale, Christos Argyropoulos

Department of Electrical and Computer Engineering: Faculty Publications

Breaking reciprocity at the nanoscale can produce directional formation of images due to the asymmetric nonlinear optical response of subwavelength anisotropic resonators. The self-induced passive non-reciprocity has advantages compared to magnet or time modulation approaches and may impact both classical and quantum photonics.

One-Bit Algorithm Considerations For Sparse Pmcw Radar, Ethan Triplett

Department of Electrical and Computer Engineering: Dissertations, Theses, and Student Research

Phase Modulated Continuous Wave (PMCW) radar an emerging technology for autonomous cars. It is more flexible than the current frequency modulated systems, offering better detection resolution, interference mitigation, and future development opportunities. The issue preventing PMCW adoption is the need for high sample-rate analog to digital converters (ADCs). Due to device limits, a large increase in cost and power consumption occurs for every added resolution bit for a given sampling rate. This thesis explores radar detection techniques for few-bit and 1-bit ADC measurements. 1-bit quantization typically results in poor amplitude estimation, which can limit detections if the target signals are …

Halide Perovskites Enable Polaritonic Xy Spin Hamiltonian At Room Temperature, Renjie Tao, Kai Peng, Louis Haeberlé, Quanwei Li, Dafei Jin, Graham R. Fleming, Stéphane Kéna-Cohen, Xiang Zhang, Wei Bao

Department of Electrical and Computer Engineering: Faculty Publications

Exciton polaritons, the part-light and part-matter quasiparticles in semiconductor optical cavities, are promising for exploring Bose–Einstein condensation, non-equilibrium many-body physics and analogue simulation at elevated temperatures. However, a room-temperature polaritonic platform on par with the GaAs quantum wells grown by molecular beam epitaxy at low temperatures remains elusive. The operation of such a platform calls for long-lifetime, strongly interacting excitons in a stringent material system with large yet nanoscale-thin geometry and homogeneous properties. Here, we address this challenge by adopting a method based on the solution synthesis of excitonic halide perovskites grown under nanoconfinement. Such nanoconfinement growth facilitates the synthesis …

Rechargeable Multi-Cell Battery, Wei Qiao, Taesic Kim, Liyan Qu

Department of Electrical and Computer Engineering: Faculty Publications

A method for power management of a multi - cell battery includes identifying a desired power value and voltage value , determining a battery voltage value and a battery current value for a battery , determining a number of battery banks from a plurality of battery banks to use for the battery , where each battery bank includes one or more battery cells ( or battery modules ) , checking availability of each of the one or more battery cells ( or battery modules ) , selecting one or more battery banks from the plurality of battery banks , where …

A High-Density Theta Burst Paradigm Enhances The Aftereffects Of Transcranial Magnetic Stimulation: Evidence From Focal Stimulation Of Rat Motor Cortex, Qinglei Meng, Hieu Nguyen, Antonia Vrana, Simone Baldwin, Charlotte Qiong Li, Antonia Giles, Jun Wang, Yihong Yang, Hanbing Lu

Department of Electrical and Computer Engineering: Faculty Publications

Background: Theta burst stimulation (TBS) is an efficient noninvasive neuromodulation paradigm that has been widely adopted, clinically. However, the efficacy of TBS treatment remains similarly modest as conventional 10 Hz repetitive transcranial magnetic stimulation (rTMS).

Objective/hypothesis: To develop a new TBS paradigm that enhances the effects of TMS administration while maintaining high time-efficiency.

Methods: We describe here a new TMS paradigm, named High-Density Theta Burst Stimulation (hdTBS). This paradigm delivers up to 6 pulses per burst, as opposed to only 3 in conventional TBS, while maintaining the inter-burst interval of 200 ms (or 5 Hz) - a …