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Bioresource and Agricultural Engineering Commons™
Open Access. Powered by Scholars. Published by Universities.®
- Keyword
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- Machine learning (2)
- Abstraction (1)
- Actinobacillus succinogenes (1)
- Agricultural robotics (1)
- Antibiotic resistance genes (1)
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- Aquatic ecosystems (1)
- Arthropods (1)
- Atrazine (1)
- Authentic learning (1)
- Autonomous robotic technology (1)
- Best management practices; Soil and Water Assessment Tool (SWAT); nutrients; E. coli; atrazine; Big Sandy Creek Watershed (BSCW) (1)
- Biogeochemistry (1)
- Biomaterials (1)
- Cancers (1)
- Classification (1)
- Climate (1)
- Co-existence (1)
- Computer vision (1)
- Conceptus elongation (1)
- Corn fiber hydrolysate (1)
- Cotton boll weevil (1)
- Crop canopy (1)
- Degeneration (1)
- Discipline-based education research (1)
- Disease diagnosis (1)
- Drone (1)
- Entomology (1)
- Environment (1)
- Extracellular matrix (1)
- Facility disinfectants (1)
Articles 1 - 30 of 30
Full-Text Articles in Bioresource and Agricultural Engineering
Low-Level Groundwater Atrazine In High Atrazine Usage Nebraska Counties: Likely Effects Of Excessive Groundwater Abstraction, Moses New-Aaron, Olufemi P. Abimbola, Raheleh Mohammadi, Oluwaseun Famojuro, Zaeema Naveed, Azar M Abadi, Jesse E. Bell, Shannon Bartelt-Hunt, Eleanor G. Rogan
Low-Level Groundwater Atrazine In High Atrazine Usage Nebraska Counties: Likely Effects Of Excessive Groundwater Abstraction, Moses New-Aaron, Olufemi P. Abimbola, Raheleh Mohammadi, Oluwaseun Famojuro, Zaeema Naveed, Azar M Abadi, Jesse E. Bell, Shannon Bartelt-Hunt, Eleanor G. Rogan
Department of Biological Systems Engineering: Papers and Publications
Recent studies observed a correlation between estrogen-related cancers and groundwater atrazine in eastern Nebraska counties. However, the mechanisms of human exposure to atrazine are unclear because low groundwater atrazine concentration was observed in counties with high cancer incidence despite having the highest atrazine usage. We studied groundwater atrazine fate in high atrazine usage Nebraska counties. Data were collected from Quality Assessed Agrichemical Contaminant Nebraska Groundwater, Parameter–Elevation Regressions on Independent Slopes Model (PRISM), and water use databases. Descriptive statistics and cluster analysis were performed. Domestic wells (59%) were the predominant well type. Groundwater atrazine was affected by well depth. Clusters consisting …
Gis-Based Volunteer Cotton Habitat Prediction And Plant-Level Detection With Uav Remote Sensing, Tianyi Wang, Xiaohan Mei, J. Alex Thomasson, Chenghai Yang, Xiongzhe Han, Pappu Kumar Yadav, Yeyin Shi
Gis-Based Volunteer Cotton Habitat Prediction And Plant-Level Detection With Uav Remote Sensing, Tianyi Wang, Xiaohan Mei, J. Alex Thomasson, Chenghai Yang, Xiongzhe Han, Pappu Kumar Yadav, Yeyin Shi
Department of Biological Systems Engineering: Papers and Publications
Volunteer cotton plants germinate and grow at unwanted locations like transport routes and can serve as hosts for a harmful cotton pests called cotton boll weevils. The main objective of this study was to develop a geographic information system (GIS) framework to efficiently locate volunteer cotton plants in the cotton production regions in southern Texas, thus reducing time and economic cost for their removal. A GIS network analysis tool was applied to estimate the most likely routes for cotton transportation, and a GIS model was created to identify and visualize potential areas of volunteer cotton growth. The GIS model indicated …
Global Analysis Of Differential Gene Expression Within The Porcine Conceptus Transcriptome As It Transitions Through Spherical, Ovoid, And Tubular Morphologies During The Initiation Of Elongation, Sophie C. Walsh, Jeremy R. Miles, Brittney N. Keel, Lea A. Rempel, Elane C. Wright‐Johnson, Amanda K. Lindholm‐Perry, William T. Oliver, Angela K. Pannier
Global Analysis Of Differential Gene Expression Within The Porcine Conceptus Transcriptome As It Transitions Through Spherical, Ovoid, And Tubular Morphologies During The Initiation Of Elongation, Sophie C. Walsh, Jeremy R. Miles, Brittney N. Keel, Lea A. Rempel, Elane C. Wright‐Johnson, Amanda K. Lindholm‐Perry, William T. Oliver, Angela K. Pannier
Department of Biological Systems Engineering: Papers and Publications
This study aimed to identify transcriptome differences between distinct or transitional stage spherical, ovoid, and tubular porcine blastocysts throughout the initiation of elongation. We performed a global transcriptome analysis of differential gene expression using RNA‐Seq with high temporal resolution between spherical, ovoid, and tubular stage blastocysts at specific sequential stages of development from litters containing conceptus populations of distinct or transitional blastocysts. After RNA‐Seq analysis, significant differentially expressed genes (DEGs) and pathways were identified between distinct morphologies or sequential development stages. Overall, 1898 significant DEGs were identified between distinct spherical and ovoid morphologies, with 311 total DEGs between developmental stages …
Injectable Decellularized Nucleus Pulposus Tissue Exhibits Neuroinhibitory Properties, Logan M. Piening, David J. Lillyman, Fei San Lee, Alvaro Moreno Lozano, Jeremy R. Miles, Rebecca A. Wachs
Injectable Decellularized Nucleus Pulposus Tissue Exhibits Neuroinhibitory Properties, Logan M. Piening, David J. Lillyman, Fei San Lee, Alvaro Moreno Lozano, Jeremy R. Miles, Rebecca A. Wachs
Department of Biological Systems Engineering: Papers and Publications
Background: Chronic low back pain (LBP) is a leading cause of disability, but treatments for LBP are limited. Degeneration of the intervertebral disc due to loss of neuroinhibitory sulfated glycosaminoglycans (sGAGs) allows nerves from dorsal root ganglia to grow into the core of the disc. Treatment with a decellularized tissue hydrogel that contains sGAGs may inhibit nerve growth and prevent discassociated LBP.
Methods: A protocol to decellularize porcine nucleus pulposus (NP) was adapted from previous methods. DNA, sGAG, α-gal antigen, and collagen content were analyzed before and after decellularization. The decellularized tissue was then enzymatically modified to be …
Corn Fiber As A Biomass Feedstock For Production Of Succinic Acid, Lisbeth Vallecilla-Yepez, Divya Ramchandran, Dianna Long, Rajib Saha, Mark R. Wilkins
Corn Fiber As A Biomass Feedstock For Production Of Succinic Acid, Lisbeth Vallecilla-Yepez, Divya Ramchandran, Dianna Long, Rajib Saha, Mark R. Wilkins
Department of Biological Systems Engineering: Papers and Publications
The selection of an economical carbon source is a fundamental parameter to establish a successful industrial succinic acid (SA) bioprocess. In this work, corn fiber (CF), a renewable and an inexpensive source of carbohydrates, was successfully used for bioproduction of SA. Optimized liquid hot water (LHW) pretreatment followed by enzymatic hydrolysis were used to obtain corn fiber hydrolysate (CFH). Results in batch fermentation with Actinobacillus succinogenes showed that a control solution mimicking CFH produced 28.7 g/L of SA with a yield of 0.67 g SA/g sugars, while fermentation of CFH produced 27.8 g/L of SA with a yield of 0.61 …
Greenhouse Gas Emissions And Drought Projections For Nebraska, Adam Liska
Greenhouse Gas Emissions And Drought Projections For Nebraska, Adam Liska
Adam Liska Papers
This lecture will focus on three issues. The first is a presentation of data from the first greenhouse gas emissions inventory for the State of Nebraska, which will be published in the coming weeks. In 2016, emissions from beef cattle made up 23% of net state emissions, and coal for electricity made up 23.7% of net state emissions. The second issue to be addressed are the impacts of the 2012 drought on agriculture in Nebraska and the region. The drought of 2012 indicates that future droughts in the 21st century in the region can be a dominant influence on …
Inter-Relationships Between Water Depletion And Temperature Differential In Row Crop Canopies In A Sub-Humid Climate, Jasreman Singh, Yufeng Ge, Derek M. Heeren, Elizabeth Walter-Shea, Christopher M.U. Neale, Suat Irmak, Wayne Woldt, Geng Bai, Sandeep Bhatti, Mitchell S. Maguire
Inter-Relationships Between Water Depletion And Temperature Differential In Row Crop Canopies In A Sub-Humid Climate, Jasreman Singh, Yufeng Ge, Derek M. Heeren, Elizabeth Walter-Shea, Christopher M.U. Neale, Suat Irmak, Wayne Woldt, Geng Bai, Sandeep Bhatti, Mitchell S. Maguire
Department of Biological Systems Engineering: Papers and Publications
Irrigation has a great impact on global food security as it contributes to the majority of the world’s agricultural food supply. It is essential to judiciously utilize water resources through efficient irrigation management since the majority of U.S. groundwater aquifers are rapidly depleting. Thus, quantification of the relationships between water depletion and environmental factors is important for understanding crop response to varying levels of water stresses that depletion can cause. The objectives of this research were to: 1) investigate the relationship between root zone water depletion (Drw) and canopy temperature differential (ΔT) at different ranges of Drw …
Disturbance Triggers Non-Linear Microbe–Environment Feedbacks, Aditi Sengupta, Sarah J. Fansler, Rosalie K. Chu, Robert E. Danczak, Vanessa A. Garayburu-Caruso, Lupita Renteria, Hyun-Seob Song, Jason Toyoda, Jacqueline Wells, James C. Stegen
Disturbance Triggers Non-Linear Microbe–Environment Feedbacks, Aditi Sengupta, Sarah J. Fansler, Rosalie K. Chu, Robert E. Danczak, Vanessa A. Garayburu-Caruso, Lupita Renteria, Hyun-Seob Song, Jason Toyoda, Jacqueline Wells, James C. Stegen
Department of Biological Systems Engineering: Papers and Publications
Conceptual frameworks linking microbial community membership, properties, and processes with the environment and emergent function have been proposed but remain untested. Here we refine and test a recent conceptual framework using hyporheic zone sediments exposed to wetting–drying transitions. Our refined framework includes relationships between cumulative properties of a microbial community (e.g., microbial membership, community assembly properties, and biogeochemical rates), environmental features (e.g., organic matter thermodynamics), and emergent ecosystem function. Our primary aim was to evaluate the hypothesized relationships that comprise the conceptual framework and contrast outcomes from the whole and putatively active bacterial and archaeal communities. Throughout the system we …
Making Space For Social And Emotional Learning In Science Education, Erin Ingram, Kristie Reddick, Jessica M. Honaker, Gwen A. Pearson
Making Space For Social And Emotional Learning In Science Education, Erin Ingram, Kristie Reddick, Jessica M. Honaker, Gwen A. Pearson
Department of Biological Systems Engineering: Papers and Publications
Social-emotional learning (SEL) is known to improve student outcomes but is rarely combined with STEM. In this paper we present an action research study to examine the impact of a STEM + SEL curriculum intervention to address a real-world school conflict. One hundred sixth–eighth graders and four teachers participated in an in-person facilitation of a SEL Arthropod curriculum, DIFFERENT. After the intervention, students completed open-ended couplet statements about arthropod behavior, tarantulas, and humans designed to measure sentiment change. Answers were manually coded using inductive coding on a scale of negative (1) to positive (5). Statement sentiments significantly shifted from negative …
Oxygen Reactive Polymers For Treatment Of Traumatic Brain Injury, Parick S. Stayton, Menko P. Ypma, Peter A. Chiarelli, Joshua Sang Hun Park, Richard G. Ellenbogen, Julia Mengyun Xu, Pierre D. Mourad, Donghoon Lee, Anthony Convertime, Forrest M. Kievit
Oxygen Reactive Polymers For Treatment Of Traumatic Brain Injury, Parick S. Stayton, Menko P. Ypma, Peter A. Chiarelli, Joshua Sang Hun Park, Richard G. Ellenbogen, Julia Mengyun Xu, Pierre D. Mourad, Donghoon Lee, Anthony Convertime, Forrest M. Kievit
Department of Biological Systems Engineering: Papers and Publications
Methods and compositions for treating traumatic brain injury . The methods and compositions utilize a multi - functional oxygen reactive polymer ( ORP ) that includes repeating units that include a reactive oxygen species ( ROS ) scavenging group and a polyalkylene oxide group . For theranostic applications , the oxygen reactive polymer fur ther includes a diagnostic group .
Comparison Of Promoter, Dna Vector, And Cationic Carrier For Efficient Transfection Of Hmscs From Multiple Donors And Tissue Sources, Tyler Kozisek, Andrew Hamann, Luke Samuelson, Miguel Fudolig, Angela K. Pannier
Comparison Of Promoter, Dna Vector, And Cationic Carrier For Efficient Transfection Of Hmscs From Multiple Donors And Tissue Sources, Tyler Kozisek, Andrew Hamann, Luke Samuelson, Miguel Fudolig, Angela K. Pannier
Department of Biological Systems Engineering: Papers and Publications
Human mesenchymal stem cells (hMSCs) are primary cells with high clinical relevance that could be enhanced through genetic modification. However, gene delivery, particularly through nonviral routes, is inefficient. To address the shortcomings of nonviral gene delivery to hMSCs, our lab has previously demonstrated that pharmacological “priming” of hMSCs with clinically approved drugs can increase transfection in hMSCs by modulating transfection-induced cytotoxicity. However, even with priming, hMSC transfection remains inefficient for clinical applications. This work takes a complementary approach to addressing the challenges of transfecting hMSCs by systematically investigating key transfection parameters for their effect on transgene expression. Specifically, we investigated …
Robotic Technologies For High-Throughput Plant Phenotyping: Contemporary Reviews And Future Perspectives, Abbas Atefi, Yufeng Ge, Santosh Pitla, James Schnable
Robotic Technologies For High-Throughput Plant Phenotyping: Contemporary Reviews And Future Perspectives, Abbas Atefi, Yufeng Ge, Santosh Pitla, James Schnable
Department of Biological Systems Engineering: Papers and Publications
Phenotyping plants is an essential component of any effort to develop new crop varieties. As plant breeders seek to increase crop productivity and produce more food for the future, the amount of phenotype information they require will also increase. Traditional plant phenotyping relying on manual measurement is laborious, time-consuming, error-prone, and costly. Plant phenotyping robots have emerged as a high-throughput technology to measure morphological, chemical and physiological properties of large number of plants. Several robotic systems have been developed to fulfill different phenotyping missions. In particular, robotic phenotyping has the potential to enable efficient monitoring of changes in plant traits …
Uavs For Vegetation Monitoring: Overview And Recent Scientific Contributions, Ana I. De Castro, Yeyin Shi, Joe Mari Maja, Jose M. Peña
Uavs For Vegetation Monitoring: Overview And Recent Scientific Contributions, Ana I. De Castro, Yeyin Shi, Joe Mari Maja, Jose M. Peña
Department of Biological Systems Engineering: Papers and Publications
This paper reviewed a set of twenty-one original and innovative papers included in a special issue on UAVs for vegetation monitoring, which proposed new methods and techniques applied to diverse agricultural and forestry scenarios. Three general categories were considered: (1) sensors and vegetation indices used, (2) technological goals pursued, and (3) agroforestry applications. Some investigations focused on issues related to UAV flight operations, spatial resolution requirements, and computation and data analytics, while others studied the ability of UAVs for characterizing relevant vegetation features (mainly canopy cover and crop height) or for detecting different plant/crop stressors, such as nutrient content/deficiencies, water …
Early Detection Of Encroaching Woody Juniperus Virginiana And Its Classification In Multi-Species Forest Using Uas Imagery And Semantic Segmentation Algorithms, Lin Wang, Yuzhen Zhou, Qiao Hu, Zhenghong Tang, Yufeng Ge, Adam Smith, Tala Awada, Yeyin Shi
Early Detection Of Encroaching Woody Juniperus Virginiana And Its Classification In Multi-Species Forest Using Uas Imagery And Semantic Segmentation Algorithms, Lin Wang, Yuzhen Zhou, Qiao Hu, Zhenghong Tang, Yufeng Ge, Adam Smith, Tala Awada, Yeyin Shi
Department of Biological Systems Engineering: Papers and Publications
Woody plant encroachment into grasslands ecosystems causes significantly ecological destruction and economic losses. Effective and efficient management largely benefits from accurate and timely detection of encroaching species at an early development stage. Recent advances in unmanned aircraft systems (UAS) enabled easier access to ultra-high spatial resolution images at a centimeter level, together with the latest machine learning based image segmentation algorithms, making it possible to detect small-sized individuals of target species at early development stage and identify them when mixed with other species. However, few studies have investigated the optimal practical spatial resolution of early encroaching species detection. Hence, we …
Utilizing Digital Image Processing And Two‑Source Energy Balance Model For The Estimation Of Evapotranspiration Of Dry Edible Beans In Western Nebraska, Wei‑Zhen Liang, Isabella Possignolo, Xin Qiao, Kendall Dejonge, Suat Irkmak, Derek M. Heeren, Daran Rudnick
Utilizing Digital Image Processing And Two‑Source Energy Balance Model For The Estimation Of Evapotranspiration Of Dry Edible Beans In Western Nebraska, Wei‑Zhen Liang, Isabella Possignolo, Xin Qiao, Kendall Dejonge, Suat Irkmak, Derek M. Heeren, Daran Rudnick
Department of Biological Systems Engineering: Papers and Publications
Having an accurate yet simple method to estimate crop evapotranspiration ( ETC) is a vital component of reliable irrigation scheduling. In this study, two versions of the two-source energy balance (TSEB) model: the TSEB model with the Priestley–Taylor equation (TSEB-PT) and the Penman–Monteith equation (TSEB-PM), were used to estimate ETC of dry edible beans in western Nebraska. Compared with previous studies, this study is unique in that a Visual Basic software—Crop Canopy Image Analyzer (CCIA) was developed to process digitally captured RGB canopy images to obtain necessary canopy cover (CC) parameters for the TSEB models such as …
Comparative Study Of Human Pluripotent Stem Cell-Derived Endothelial Cells In Hydrogel-Based Culture Systems, Zhanqi Wang, Fuxing Zuo, Qing Liu, Xuesheng Wu, Qian Du, Yuguo Lei, Zhangmin Wu, Haishuang Lin
Comparative Study Of Human Pluripotent Stem Cell-Derived Endothelial Cells In Hydrogel-Based Culture Systems, Zhanqi Wang, Fuxing Zuo, Qing Liu, Xuesheng Wu, Qian Du, Yuguo Lei, Zhangmin Wu, Haishuang Lin
Department of Biological Systems Engineering: Papers and Publications
Human pluripotent stem cell (hPSC)-derived endothelial cells (ECs) are promising cell sources for drug discovery, tissue engineering, and studying or treating vascular diseases. However, hPSC-ECs derived from different culture methods display different phenotypes. Herein, we made a detailed comparative study of hPSC-ECs from three different culture systems (e.g., 2D, 3D PNIPAAm-PEG hydrogel, and 3D alginate hydrogel cultures) based on our previous reports. We expanded hPSCs and differentiated them into ECs in three culture systems. Both 3D hydrogel systems could mimic an in vivo physiologically relevant microenvironment to protect cells from shear force and prevent cell agglomeration, leading to a high …
Determination Of Vadose Zone And Saturated Zone Nitrate Lag Times Using Long-Term Groundwater Monitoring Data And Statistical Machine Learning, Martin J. Wells, Troy E. Gilmore, Natalie Nelson, John K. Bohlke
Determination Of Vadose Zone And Saturated Zone Nitrate Lag Times Using Long-Term Groundwater Monitoring Data And Statistical Machine Learning, Martin J. Wells, Troy E. Gilmore, Natalie Nelson, John K. Bohlke
Department of Biological Systems Engineering: Papers and Publications
In this study, we explored the use of statistical machine learning and long-term groundwater nitrate monitoring data to estimate vadose zone and saturated zone lag times in an irrigated alluvial agricultural setting. Unlike most previous statistical machine learning studies that sought to predict groundwater nitrate concentrations within aquifers, the focus of this study was to leverage available groundwater nitrate concentrations and other environmental variables to determine mean regional vertical velocities (transport rates) of water and solutes in the vadose zone and saturated zone (3.50 and 3.75 m yr−1 , respectively). The statistical machine learning results are consistent with two primary …
Role Of Nadþ In Regulating Cellular And Metabolic Signaling Pathways, Sara Amjad, Sabah Nisar, Ajaz A. Bhat, Ab Rauf Shah, Michael P. Frenneaux, Khalid Fakhro, Mohammad Haris, Ravinder Reddy, Zoltan Patay, Joseph Baur, Puneet Bagga
Role Of Nadþ In Regulating Cellular And Metabolic Signaling Pathways, Sara Amjad, Sabah Nisar, Ajaz A. Bhat, Ab Rauf Shah, Michael P. Frenneaux, Khalid Fakhro, Mohammad Haris, Ravinder Reddy, Zoltan Patay, Joseph Baur, Puneet Bagga
Department of Biological Systems Engineering: Papers and Publications
Background: Nicotinamide adenine dinucleotide (NAD+), a critical coenzyme present in every living cell, is involved in a myriad of metabolic processes associated with cellular bioenergetics. For this reason, NAD+ is often studied in the context of aging, cancer, and neurodegenerative and metabolic disorders.
Scope of review: Cellular NAD+ depletion is associated with compromised adaptive cellular stress responses, impaired neuronal plasticity, impaired DNA repair, and cellular senescence. Increasing evidence has shown the efficacy of boosting NAD+ levels using NAD+ precursors in various diseases. This review provides a comprehensive understanding into the role of NAD+ …
Historical Contingency In Microbial Resilience To Hydrologic Perturbations, Hyun-Seob Song, James C. Stegen, Emily B. Graham, Timothy D. Scheibe
Historical Contingency In Microbial Resilience To Hydrologic Perturbations, Hyun-Seob Song, James C. Stegen, Emily B. Graham, Timothy D. Scheibe
Department of Biological Systems Engineering: Papers and Publications
Development of reliable biogeochemical models requires a mechanistic consideration of microbial interactions with hydrology. Microbial response to and its recovery after hydrologic perturbations (i.e., resilience) is a critical component to understand in this regard, but generally difficult to predict because the impacts of future events can be dependent on the history of perturbations (i.e., historical contingency). Fundamental issues underlying this phenomenon include how microbial resilience to hydrologic perturbations is influenced by historical contingency and how their relationships vary depending on the characteristics of microbial functions. To answer these questions, we considered a simple microbial community composed of two species that …
Low-Level Groundwater Atrazine In High Atrazine Usage Nebraska Counties: Likely Effects Of Excessive Groundwater Abstraction, Moses New-Aaron, Olufemi Abimbola, Raheleh Mohammadi, Oluwaseun Famojuro, Zaeema Naveed, Azar Abadi, Jesse E. Bell, Shannon Bartelt-Hunt, Eleanor G. Rogan
Low-Level Groundwater Atrazine In High Atrazine Usage Nebraska Counties: Likely Effects Of Excessive Groundwater Abstraction, Moses New-Aaron, Olufemi Abimbola, Raheleh Mohammadi, Oluwaseun Famojuro, Zaeema Naveed, Azar Abadi, Jesse E. Bell, Shannon Bartelt-Hunt, Eleanor G. Rogan
Department of Biological Systems Engineering: Papers and Publications
Recent studies observed a correlation between estrogen-related cancers and groundwater atrazine in eastern Nebraska counties. However, the mechanisms of human exposure to atrazine are unclear because low groundwater atrazine concentration was observed in counties with high cancer incidence despite having the highest atrazine usage. We studied groundwater atrazine fate in high atrazine usage Nebraska counties. Data were collected from Quality Assessed Agrichemical Contaminant Nebraska Groundwater, Parameter–Elevation Regressions on Independent Slopes Model (PRISM), and water use databases. Descriptive statistics and cluster analysis were performed. Domestic wells (59%) were the predominant well type. Groundwater atrazine was affected by well depth. Clusters consisting …
Improvements In Sub-Catchment Fractional Snowpack And Snowmelt Parameterizations And Hydrologic Modeling For Climate Change Assessments In The Western Himalayas, Vishal Singh, Francisco Muñoz-Arriola
Improvements In Sub-Catchment Fractional Snowpack And Snowmelt Parameterizations And Hydrologic Modeling For Climate Change Assessments In The Western Himalayas, Vishal Singh, Francisco Muñoz-Arriola
Department of Biological Systems Engineering: Papers and Publications
The present work proposes to improve estimates of snowpack and snowmelt and their assessment in the steep Himalayan ranges at the sub-catchment scale. Temporal variability of streamflow and the associated distribution of accumulated snow in catchments with glacier presence in the Himalayas illustrates how changes in snowpack and snowmelt can affect the water supply for local water management. The primary objective of this study is to assess the role of elevation, temperature lapse rate (TLR), and precipitation lapse rate (PLR) in the computation of snowpack (or snowfall) and snowmelt in sub-catchments of the Satluj River basin. Modeling of snowpack and …
Editorial: Predictive Modeling Of Human Microbiota And Their Role In Health And Disease, Hyun-Seob Song, Stephen R. Lindemann, Dong-Yup Lee
Editorial: Predictive Modeling Of Human Microbiota And Their Role In Health And Disease, Hyun-Seob Song, Stephen R. Lindemann, Dong-Yup Lee
Department of Biological Systems Engineering: Papers and Publications
No abstract provided.
Antibiotic Resistance Genes In Swine Manure Slurry As Affected By Pit Additives And Facility Disinfectants, Maria C. Hall, Jon Duerschner, John E. Gilley, Amy Schmidt, Shannon Bartelt-Hunt, Daniel D. Snow, Kent M. Eskridge, Xu Li
Antibiotic Resistance Genes In Swine Manure Slurry As Affected By Pit Additives And Facility Disinfectants, Maria C. Hall, Jon Duerschner, John E. Gilley, Amy Schmidt, Shannon Bartelt-Hunt, Daniel D. Snow, Kent M. Eskridge, Xu Li
Department of Biological Systems Engineering: Papers and Publications
Manure storage facilities are critical control points to reduce antibiotic resistance genes (ARGs) in swine manure slurry before the slurry is land applied. However, little is known about how exogenous chemicals entering the manure storage facilities may affect the fate of ARGs. The objective of this study was to analyze the impact of six commonly used pit additives and four facility disinfectants on the concentration of ARGs in swine manure slurry. Bench scale reactors, each containing approximately 50 L of liquid swine manure, were dosed with additives or disinfectants and were sampled for 40 days. Seven antibiotic resistance genes along …
Quantification Of Nitric Oxide Concentration Using Single-Walled Carbon Nanotube Sensors, Jakob Meier, Joseph Stapleton, Eric M. Hofferber, Abigail Haworth, Stephen D. Kachman, Nicole M. Iverson
Quantification Of Nitric Oxide Concentration Using Single-Walled Carbon Nanotube Sensors, Jakob Meier, Joseph Stapleton, Eric M. Hofferber, Abigail Haworth, Stephen D. Kachman, Nicole M. Iverson
Department of Biological Systems Engineering: Papers and Publications
Nitric oxide (NO), a free radical present in biological systems, can have many detrimental effects on the body, from inflammation to cancer. Due to NO’s short half-life, detection and quan- tification is difficult. The inability to quantify NO has hindered researchers’ understanding of its impact in healthy and diseased conditions. Single-walled carbon nanotubes (SWNTs), when wrapped in a specific single-stranded DNA chain, becomes selective to NO, creating a fluorescence sensor. Unfortunately, the correlation between NO concentration and the SWNT’s fluorescence intensity has been difficult to determine due to an inability to immobilize the sensor without altering its properties. Through the …
Modeling And Prioritizing Interventions Using Pollution Hotspots For Reducing Nutrients, Atrazine And E. Coli Concentrations In A Watershed, Olufemi P. Abimbola, Aaron R. Mittelstet, Tiffany Messer, Elaine Berry, Anna Van Griensven
Modeling And Prioritizing Interventions Using Pollution Hotspots For Reducing Nutrients, Atrazine And E. Coli Concentrations In A Watershed, Olufemi P. Abimbola, Aaron R. Mittelstet, Tiffany Messer, Elaine Berry, Anna Van Griensven
Department of Biological Systems Engineering: Papers and Publications
Excess nutrients and herbicides remain two major causes of waterbody impairment globally. In an attempt to better understand pollutant sources in the Big Sandy Creek Watershed (BSCW) and the prospects for successful remediation, a program was initiated to assist agricultural producers with the implementation of best management practices (BMPs). The objectives were to (1) simulate BMPs within hotspots to determine reductions in pollutant loads and (2) to determine if water-quality standards are met at the watershed outlet. Regression-based load estimator (LOADEST) was used for determining sediment, nutrient and atrazine loads, while artificial neural networks (ANN) were used for determining E. …
Assessing Different Plant-Centric Water Stress Metrics For Irrigation Efficacy Using Soil-Plant-Atmosphere-Continuum Simulation, Jingwen Zhang, Kaiyu Guan, Bin Peng, Ming Pan, Wang Zhou, Robert F. Grant, Trenton E. Franz, Daran Rudnick, Derek M. Heeren, Andrew Suyker, Yi Yang, Genghong Wu
Assessing Different Plant-Centric Water Stress Metrics For Irrigation Efficacy Using Soil-Plant-Atmosphere-Continuum Simulation, Jingwen Zhang, Kaiyu Guan, Bin Peng, Ming Pan, Wang Zhou, Robert F. Grant, Trenton E. Franz, Daran Rudnick, Derek M. Heeren, Andrew Suyker, Yi Yang, Genghong Wu
Department of Biological Systems Engineering: Papers and Publications
Understanding plant water stress (PWS) in the soil-plant-atmosphere-continuum (SPAC) that connects water supply from soil, water demand from atmosphere, and plant self-regulation is a prerequisite for efficient irrigation in response to water scarcity. Currently, PWS can be defined in various ways, for example, based on environmental factors and/or plant-centric metrics. The environment-based metrics usually do not take plants into consideration. Regarding the existing plant-centric metrics, their interconnections and abilities to capture the physical water constraints from both soil water supply and atmospheric water demand are still unclear. This research investigates the theoretical foundations behind different PWS metrics, and assesses their …
Differential Survival Of Non-O157 Shiga Toxigenic Escherichia Coli In Simulated Cattle Feedlot Runoff, Lisa M. Durso, John E. Gilley, Daniel N. Miller
Differential Survival Of Non-O157 Shiga Toxigenic Escherichia Coli In Simulated Cattle Feedlot Runoff, Lisa M. Durso, John E. Gilley, Daniel N. Miller
Department of Biological Systems Engineering: Papers and Publications
Environmental survival time is important when evaluating adverse health outcomes from foodborne pathogens. Although outbreaks associated with manure-impacted irrigation or runoff water are relatively infrequent, their broad scope, regulatory importance, and severe health outcomes highlight the need to better understand the environmental survival of manure-borne pathogens. Shiga toxigenic Escherichia coli (STEC) are excreted in feces and persist in the environment until they die or recolonize a new host. Surface waters contaminated with manure-borne STEC can infect humans through drinking and recreational water use or irrigated crops that are minimally cooked. In this study, manure-impacted water microcosms mimicking beef cattle feedlot …
The Nanotheranostic Researcher’S Guide For Use Of Animal Models Of Traumatic Brain Injury, Brandon Z. Mcdonald, Connor C. Gee, Forrest M. Kievit
The Nanotheranostic Researcher’S Guide For Use Of Animal Models Of Traumatic Brain Injury, Brandon Z. Mcdonald, Connor C. Gee, Forrest M. Kievit
Department of Biological Systems Engineering: Papers and Publications
Traumatic brain injury (TBI) is currently the leading cause of injury-related morbidity and mortality worldwide, with an estimated global cost of USD 400 billion annually. Both clinical and preclinical behavioral outcomes associated with TBI are heterogeneous in nature and influenced by the mechanism and frequency of injury. Previous literature has investigated this relationship through the development of animal models and behavioral tasks. However, recent advancements in these methods may provide insight into the translation of therapeutics into a clinical setting. In this review, we characterize various animal models and behavioral tasks to provide guidelines for evaluating the therapeutic efficacy of …
Evolution Of Three Streambanks Before And After Stabilization And Record Flooding, Matthew Russell, Aaron R. Mittelstet, Tiffany Messer, Jesse T. Korus, R.M. Joeckel
Evolution Of Three Streambanks Before And After Stabilization And Record Flooding, Matthew Russell, Aaron R. Mittelstet, Tiffany Messer, Jesse T. Korus, R.M. Joeckel
Department of Biological Systems Engineering: Papers and Publications
Stabilization projects are increasingly used to mitigate the effects of anthropogenic streambank erosion, yet the effectiveness of stabilization has been insufficiently measured. Sound monitoring practices inform adjustments in implementation and maintenance, which improve engineered effectiveness. Thus, the objectives of this study were to: 1) measure streambank migration from in three reaches stabilized with wooden jetties following a major flooding event, and 2) quantify deposition around the jetties between pre-flood and post-flood. Streambank deposition was measured in 2019 with a River Surveyor and Global Positioning System (GPS). Bank erosion rates in Reaches 1, 2 and 3 were 0.41, 0.96 and 0.07 …
Frontier: Discipline-Based Education Research To Advance Authentic Learning In Agricultural And Biological Engineering, Heidi A. Diefes-Dux
Frontier: Discipline-Based Education Research To Advance Authentic Learning In Agricultural And Biological Engineering, Heidi A. Diefes-Dux
Department of Biological Systems Engineering: Papers and Publications
Discipline-based education research (DBER) is research activity aimed at investigating “learning and teaching in a discipline from a perspective that reflects the discipline’s priorities, worldview, knowledge, and practices” for the purpose of producing research-based evidence to improve education in that discipline. DBER arose out of concerns about the quality of post-secondary science education. Physics, chemistry, engineering, biology, geosciences, and astronomy education each have unique DBER histories in the U.S. that date back to the late 1800s or early 1900s when colleges and university systems were expanding and formalizing. The DBER fields accelerated in the 1950s and 1960s as a result …