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Full-Text Articles in Biomedical Engineering and Bioengineering
Update Of Multicellular Data Standard To Match Physicell "Compact" Output., Reid A Honeycutt
Update Of Multicellular Data Standard To Match Physicell "Compact" Output., Reid A Honeycutt
Electronic Theses and Dissertations
In the field of multicellular biology, it is currently very difficult for researchers to share digital data, due to a lack of standards for said data. Each laboratory will collect data from a particular project, which will describe only the features relevant to their research, and then present that data using written descriptions, charts, graphs, and images. This makes it difficult for the data produced by these studies be leveraged in other research efforts by scientists studying similar phenomena. An open-source, universal standard that attempts to meet this need is the MultiCellular Data Standard (MultiCellDS). MultiCellDS is described as a …
Conversion Of Multicellds Digital Snapshots To Isa-Tab Format., Corey P. Chitwood
Conversion Of Multicellds Digital Snapshots To Isa-Tab Format., Corey P. Chitwood
Electronic Theses and Dissertations
The MultiCellular Data Standard (MultiCellDS) is an interdisciplinary effort to create a data standard for sharing multicellular experimental, simulation, and clinical data. The ultimate goal of the overall project is to allow for data sharing that will lead to better analyses and simulations for multicellular biology and predictive medicine in association with the PhysiCell, a software that allows for simulations of large numbers of cells in 3D tissues. Digital cell lines are files that contain a standardized representation of a biological cell line and include phenotypic parameters as well as microenvironmental conditions for use in simulations. A Digital Cell Line …