Engineering Commons^™

Understanding The Mechanisms By Which Cable Sway Produces Motion Artifact In Mobile Electroencephalography, David Rojas

Electronic Theses and Dissertations, 2020-

Mobile brain/body imaging utilizes electroencephalography (EEG) to record brain activity during human walking in dynamic environments. Motion artifact from cable sway affects the quality of EEG signals collected from the scalp, masking contributions of synchronously firing neurons. Previous studies have explored cable sway-induced motion artifact, but only during vigorous exercise or controlled sinusoidal motion. Therefore, a need remains to further understand the underlying mechanisms of this artifact, as it may help with developing real-time mitigation methods, reducing reliance on offline signal processing. In this thesis, I aimed to show that controlled cable sway could produce specific motion artifact waveforms in …

Expression Optimization Of The Gst-Gfp Fusion Protein Through The Alteration Of Induction Conditions, Matthew J. Vaccaro

Honors Undergraduate Theses

This research sought to determine which induction condition resulted in the greatest GST-GFP fusion protein expression. It will hopefully serve as a guide for future researchers trying to produce their own recombinant protein containing GST and GFP-tags. The CDNB Enzyme Assay was used to determine the quantity of GST-GFP fusion protein present and tested three variables: IPTG concentration, duration, and temperature of induction. The findings showed that IPTG concentration, temperature, and induction duration all had a significant impact on protein expression. Induction temperatures of 20 °C and 25 °C showed better protein expression at IPTG concentrations of 1.0 mM IPTG …

Gait Strategies While Walking With Discrete Perturbations On A Self-Paced Treadmill, Cesar Castano

Electronic Theses and Dissertations, 2020-

Introducing perturbations on a self-paced treadmill allows participants to experience uncertain environments without restricting their ability to continuously change their walking speed and kinematics. In this dissertation, I evaluated how different self-paced treadmill controller sensitivities affected gait parameters and variability on decline, level, and incline slopes. I also investigated how healthy young and older adults adjust their gait strategies when responding to perturbations of varying unpredictability and whether the changes in gait strategies remained once the perturbations were no longer present. Lastly, I evaluated how differences in gait kinematics when responding to visual and mechanical perturbations at varying frequencies. I …

Probing Endothelial Cell Mechanics Under Disturbed Fluid Flow, Jingwen Wu

Electronic Theses and Dissertations, 2020-

Endothelial cells, which form the inner layer of the vasculature, interact with the extracellular matrix (ECM) by exerting mechanical contractile cell-substrate stress called tractions and cell-cell stresses called intercellular stresses. This cellular mechanical behavior involves many fundamental biological processes, including cell migration, differentiation, angiogenesis, and wound healing. Also, the inner surface of the vasculature, where endothelial cells reside, is constantly exposed to various fluid flows. The most variable fluid flow regimes occur primarily within branching regions of the vasculature. Endothelial cells residing within these regions experience disturbed flow, which consists of irregular flow patterns and extreme wall shear stress gradients. …

Electrode Evaluation And Electrocortical Dynamics Of Adapting To Small Perturbations During Treadmill Walking, Jinfeng Li

Electronic Theses and Dissertations, 2020-

Mobile brain-body imaging (MoBI) seeks to understand human brain and body dynamics during movement and locomotor tasks such as walking with perturbations that challenge balance and lead to adaptation of walking behavior. In this dissertation, I evaluated the long-term electromyography (EMG) recording performance of dry epidermal electrodes for measuring electrical muscle activity. I also evaluated the relationships between the signals recorded from the two sides of dual-sided electroencephalography (EEG) electrodes, a recent advancement in EEG electrode design for measuring electrical brain activity. Last, I investigated adaptation of brain and body responses to small and frequent perturbations during treadmill walking while …

Mesenchymal Stromal Cell And Chondrocyte Mobility In 3d Bioprinted Hydrogel Constructs, Alesia Lokshina

Honors Undergraduate Theses

Osteoarthritis (OA) is a progressive cartilage degeneration disease with a complex pathologic mechanism. Although OA has devastating effects on patient quality of life and places a significant burden on the healthcare system, no disease-modifying drugs have been found, and surgical treatment options are often unsustainable. 3D bioprinting is a novel field within tissue engineering that focuses on developing biocompatible constructs that can be implanted to replace an organ or tissue. Such constructs have a great potential to become treatments for OA. Understanding cell mobility within hydrogels could play a vital role in advancing the development of biocompatible constructs. However, due …

A Measurement System For Detection Of Intestinal Motility In Neonates By Monitoring Slow Wave Activity, Garett Goodale

Electronic Theses and Dissertations, 2020-

Similar to how electrocardiographic waves are the pace making signals of the heart, slow waves are the pace making signals of the intestines. Slow waves are electrical signals in the intestines that determine the speed at which food can move through the intestine ensuring proper digestion and uptake of nutrients. It has been shown that slow waves can be measured in adults using non-invasive, surface electrodes. However, no study has investigated the measurements of slow waves in neonates, specifically pre-term neonates. Around 7% of pre-term neonates suffer from necrotizing enterocolitis (NEC) which is a condition that causes damage to the …

Examining The Effects Of Synthetic Dye Yellow No. 5 (Tartrazine) Exposure On Mouse Neuro2a Neurons In Vitro, Jenna L. Farnum

Honors Undergraduate Theses

Yellow Dye No. 5, also known as tartrazine (TRZ), is widely used[1] and has an accepted daily intake (ADI) of 0-7.5 mg/kg of body weight per day^[2]. Consuming TRZ dosages greater than the ADI can lead to reduced levels of antioxidant enzymes in the brain, chromosomal alterations, or neuronal dendritic changes, [3, 4] which can result in oxidative stress, impaired neuronal functioning and potential mutagenic effects. Within the ADI, there have been observed reductions of the copper zinc superoxide dismutase-1 (SOD1) enzyme levels.[5]We hypothesize that TRZ interacts pre-translationally inside the cell, resulting in the reduction of SOD1 mRNA. …

Probing The Effect Of Hyperglycemia On Endothelial Force Generation And Transmission, Jovani J. Gutierrez

Honors Undergraduate Theses

This thesis intends to utilize biomechanics to study the endothelial biomechanical response in a static hyperglycemic microenvironment. Hyperglycemia is a diabetic condition with abnormally high levels of glucose in the bloodstream. The effects of hyperglycemia over time lead to vascular complications resulting in patients being more prone to cardiovascular diseases. Current studies have focused on the molecular mechanisms affected by hyperglycemia; however, the mechanical mechanisms by which hyperglycemia causes vascular structural and functional changes are understudied. Therefore, to study the effects of hyperglycemia in the endothelium, Human Umbilical Vein Endothelial Cells (HUVEC) were cultured under three glucose conditions: normal glucose …

Design And Development Of Medical Devices For Multifaceted Applications, Madisyn Messmore

Honors Undergraduate Theses

The fields of biotechnology and biomedical sciences are rapidly evolving and involve the constant growth of knowledge. As a consequence, engineering design has to also remain at the cutting edge in order to not inhibit the growth of these fields. This study focuses on engineering design and analysis as it pertains to the field of biotechnology, at every step of the engineering process. More specifically, how the engineering design and analysis approach can assist in solving medical problems relating to bone diseases and biomaterials. The first part of the study focuses on a project to design and manufacture a novel …

Reporter Chondrocyte Optimization Of Bioinks For Zonal 3d Bioprinting Of Cartilage, Kari Martyniak

Electronic Theses and Dissertations, 2020-

Osteoarthritis (OA) is the most common form of arthritis, often thought of as a disease of the elderly, but post traumatic OA predominantly impacts younger individuals. Articular cartilage is the tissue that coats the end of your bones in synovial joints. Since cartilage has limited healing capacity, defects, or injuries to it progressively erodes down to the subchondral bone. Unfortunately, current treatment options all have limitations, particularly for younger patients. Cartilage has a specific zonal architecture that is distinguished by the different cell morphologies and arrangements, biochemical composition, and mechanical properties. 3D bioprinting is a tissue engineering technique that involves …

The Role Of Pro-Longevity Micrornas In Aging, Sarah Noureddine

Electronic Theses and Dissertations, 2020-

Cellular senescence, a hallmark of aging, has been implicated in the pathogenesis of many major age-related disorders, including atherosclerosis, metabolic disease, and neurodegenerative disorders such as Alzheimer's disease (AD). AD is characterized by increased cognitive impairment and treatment options available provide minimal disease attenuation. Additionally, diagnostic methods for AD are not conclusive with definitive diagnoses requiring postmortem brain evaluations. Therefore, miRNAs, a class of small, non-coding RNAs, have garnered attention for their ability to regulate a variety of mRNAs and their potential to serve as both therapeutic targets and biomarkers of disease. Several miRNAs have already been implicated with AD …

Characterization Of A Malachite Green Dna Aptamer And Development Of Malachite Green Dna Aptamer Sensor, Martin O'Steen

Electronic Theses and Dissertations, 2020-

Hydrogels have been extensively studied for use in applications such as tissue engineering, drug delivery systems, wound dressing, actuators, valves, and sensors in Micromechanical Systems (MEMS), among others. Thermo-responsive hydrogels in particular pose various advantages such as their capability to respond to an external stimulus and reverse the response when the stimulus is removed and the ability to imbibe a significant amount of solvent and increase their volume by over 1000%. Extensive research has been conducted to tune and improve hydrogel's rate and degree of swelling and mechanical properties. Previous work showed that when synthetic clay (Laponite) is cross-linked with …

Tailoring Of The Left Ventricular Assist Device Cannula Implantation Using Coupled Multi-Scale Multi-Objective Patient Specific Optimization., Abubakar Dankano

Electronic Theses and Dissertations, 2020-

Despite advancements in device design and anti-coagulation treatments, there are numerous adverse events that may occur following implantation of LVADs. The most devastating involves the embolization of thrombus into the brain causing a stroke, with incidence of up to 14-47% over a 6–12-month period. This study aims to elucidate ways to reduce this risk by surgical maneuvers guided by a multi-scale computational fluid dynamics analysis wrapped around a multi-objective shape optimization scheme which optimizes the anastomosis location of the VAD outflow graft (OG) along the ascending aorta to minimize the incidence of thrombi reaching the cerebral vessels and reduce particle …

Design Of Miniaturized Antipodal Vivaldi Antennas And A Microwave Head Imaging System For The Detection Of Blood Clots In The Brain, Farhana Parveen

Electronic Theses and Dissertations, 2020-

Traditional brain imaging modalities, for example, MRI, CT scan, X-ray, etc. can provide precise and high-resolution images of the brain for diagnosing lesions, tumors or clots inside the brain. However, these modalities require bulky and expensive test setups accessible only at specialized diagnostic centers, and hence may not be suitable or affordable to many patients. Furthermore, the inherent health risks limit the usability of these modalities for frequent monitoring. Microwave imaging is deemed a promising alternative due to its being cost-effective, portable, non-ionizing, non-intrusive. Therefore, this work aims to design an effective microwave head imaging system for the detection of …

Multifactorial Media Analysis Via Design Of Experiment For Type Ii Collagen In Primary Rabbit Chondrocytes, Javier A. Velez Toro

Honors Undergraduate Theses

Osteoarthritis is a prevalent disease that affects the articular cartilage of the joints. Millions of people suffer worldwide and it is a major cause of disability in the United States. Current research for treatments of osteoarthritis are studying tissue-engineered cartilage in vitro generated by articular chondrocytes. A challenge faced in vitro for cartilage tissue engineering is the failure of chondrocytes to produce adequate expression of type II collagen. Surprisingly, the media commonly used in vitro lacks 14 vitamins and minerals present in the physiological environment of chondrocytes. Therefore, studying the interactions between micronutrients and chondrocytes may help in potentially increasing …

Targeting T Cell Glycolysis To Mitigate Graft-Versus-Host Disease, Kevin Ezhakunnel

Honors Undergraduate Theses

Hematological cancers account for nearly ten percent of cancer cases diagnosed annually in the United States. Patients who fail to respond to chemotherapy or radiotherapy must often undergo a bone marrow transplant to treat their malignancy. A significant complication following this procedure is Graft versus Host Disease (GvHD), which occurs when donor T cells mount an immune response against recipient tissues. Immunological research has highlighted the role of aberrant T cell metabolism, specifically a shift toward aerobic glycolysis, as a key driver behind the occurrence of this condition. The transcription factor FoxK1 has been revealed to be a key regulator …

Workspace And Kinematic Modeling And Analysis Of Semi-Robotic Laparoscopic Surgery, Immanuel E. Girgis

Honors Undergraduate Theses

Laparoscopic Surgery has been revolutionized by the world of Surgical Robotics. Robot-Assisted Surgeries have been proven to have many advantages over the fundamental, traditional "by-hand" procedures previously conducted, and still currently being done for certain operations. Robot-assisted surgery may offer benefits to patients through the use of minimally invasive techniques, which may result in reduced blood loss, reduced blood transfusion, fewer complications, reduced postoperative pain, shorter hospital stays, and reduced recovery times (Ho et al., 2011). Studies have proven that robotic surgery may lead to patients recovering faster depending on the timeframe and the type of procedure (Tang et al., …

Understanding Forearm Muscle Coordination In Children, Miguel Gonzalez

Electronic Theses and Dissertations, 2020-

A combination of surface electromyography (EMG) and pattern recognition algorithms have led to improvements in the functionality of upper limb prosthetics. This method of control relies on user's ability to repeatedly generate consistent muscle contractions. Research in EMG based control of prosthesis has mainly utilized adult subjects who have fully developed neuromuscular control. Little is known about children's ability to generate consistent EMG signals necessary to control artificial limbs with multiple degrees of freedom. To address this gap, two experiments were designed to validate and benchmark an experimental protocol that quantifies the ability to coordinate forearm muscle contractions in able-bodied …

Using A Lubricin Reporter Cell To Test Current Vs. Optimized Media Compositions, Sean M. Kennedy

Honors Undergraduate Theses

Osteoarthritis is a joint disease characterized by the breakdown of articular cartilage. The field of tissue engineering is interested in developing methods to produce biological alternatives to current orthopedic procedures. Lubricin is a molecule which is important in the proper lubrication of articular cartilage. It is a challenge in the field of tissue engineering to produce cartilage with sufficient lubricin expression. Developing a reporter cell for lubricin allowed for a more efficient investigation of the conditions wh­­­ich may influence its expression. By comparing "optimized" and traditional media solutions, it was determined that the use of a previously reported type II …

Assessing 3d Printability Of Bioinks, Nicole Ramirez

Honors Undergraduate Theses

The field of tissue engineering (TE) is continuously improving through the use of additive manufacturing techniques (AM) such as three-dimensional (3D) bioprinting. The 3D bioprinter has significantly gained attention in the TE field because it is more efficient than regenerative medicine and is readily available as opposed to organ transplants. Working like a conventional 3D printer, the 3D bioprinter is able to dispense material layer by layer from the bottom up with the printing head able to move in the X, Y, and Z direction. This movement allows for the fabrication of structures with complex geometries. In this study, the …

Energy Expenditure And Stability During Self-Paced Walking On Different Slopes, Alanna Raffaelli

Electronic Theses and Dissertations

Metabolic power and cost of transport (COT) are common quantifiers for effort when performing tasks including walking and running. Most studies focus on using a range of normal walking speeds over level ground or varied slopes. However, these studies use fixed-speed conditions. Fatigue, stability, metabolic expenditure, heart rate, and many other factors contribute to normal walking speed varying over time. This study aimed to show that allowing a subject to walk with a self-paced speed should correlate to a minimum COT at a given slope. This study also aimed to determine if a preferred slope exists based on minimizing metabolic …

Conceptualization And Fabrication Of A Bioinspired Mobile Robot Actuated By Shape Memory Alloy Springs, Lietsel Richardson

Electronic Theses and Dissertations

This work is an experimental study and fabrication of design concepts to validate the feasibility of smart materials and their applications in bio-inspired robotics. Shape-Memory Alloy (SMA) springs are selected as the smart material actuators of interest to achieve locomotion in the proposed mobile robot. Based on a previous design of the robot, this work focuses on both implementing a new locomotion concept and reducing size and weight of the previous design, both using SMA based actuators. Objectives are met in consideration of the conceptual mechanics of circular robot locomotion. The first prototype is a variation of the original design. …

Fluctuations In Walking Speeds And Spatiotemporal Gait Parameters When Walking On A Self-Paced Treadmill At Level, Incline, And Decline Slopes, Cesar Castano

Electronic Theses and Dissertations

On a daily basis, humans walk over a variety of terrains. Studies have shown that spatiotemporal gait parameters, such as stride length, stride frequency, stride variability, etc., change when humans walk down a decline and up an incline compared to level ground. However, these studies have been limited to using fixed speed treadmills or analyzing a small number of strides when conducted over ground. Thus, there is a need to investigate the fluctuations in spatiotemporal gait parameters of humans walking at their self-selected speed, which requires recording hundreds of strides. Here we hypothesized that subjects will walk with a slower …

Classifying And Predicting Walking Speed From Electroencephalography Data, Allen Rahrooh

Electronic Theses and Dissertations

Electroencephalography (EEG) non-invasively records electrocortical activity and can be used to understand how the brain functions to control movements and walking. Studies have shown that electrocortical dynamics are coupled with the gait cycle and change when walking at different speeds. Thus, EEG signals likely contain information regarding walking speed that could potentially be used to predict walking speed using just EEG signals recorded during walking. The purpose of this study was to determine whether walking speed could be predicted from EEG recorded as subjects walked on a treadmill with a range of speeds (0.5 m/s, 0.75 m/s, 1.0 m/s, 1.25 …

Probing The Effects Of Substrate Stiffness On Astrocytes Mechanics, Ariege Bizanti

Electronic Theses and Dissertations

Astrocytes are among the most functionally diverse population of cells in the central nervous system (CNS) as they are essential to many important neurological functions including maintaining brain homeostasis, regulating the blood brain barrier, and preventing build-up of toxic substances within the brain, for example. Astrocyte importance to brain physiology and pathology has inspired a host of studies focused on understanding astrocyte behavior primarily from a biological and chemical perspective. However, a clear understanding of astrocyte dysfunction and their link to disease has been hampered by a lack of knowledge of astrocyte behavior from a biomechanical perspective. Furthermore, astrocytes (and …

Mimicking Blood Rheology For More Accurate Modeling In Benchtop Research, Lindsey Webb

Honors Undergraduate Theses

To confirm computer simulations and Computational Fluid Dynamics (CFD) analysis, benchtop experiments are needed with a fluid that mimics blood and its viscoelastic properties. Blood is challenging to use as a working fluid in a laboratory setting because of health and safety concerns. Therefore, a blood analogue is necessary to perform benchtop experiments. Viscosity is an important property of fluids for modeling and experiments. Blood is a shear thinning fluid, so it has a decreasing viscosity with higher shear rates. This project seeks to create a blood mimicking fluid for benchtop laboratory use. Numerous fluids with different combinations of water, …

A Machine Learning Approach To Assess The Separation Of Seismocardiographic Signals By Respiration, Brian Solar

Honors Undergraduate Theses

The clinical usage of Seismocardiography (SCG) is increasing as it is being shown to be an effective non-invasive measurement for heart monitoring. SCG measures the vibrational activity at the chest surface and applications include non-invasive assessment of myocardial contractility and systolic time intervals. Respiratory activity can also affect the SCG signal by changing the hemodynamic characteristics of cardiac activity and displacing the position of the heart. Other clinically significant information, such as systolic time intervals, can thus manifest themselves differently in an SCG signal during inspiration and expiration. Grouping SCG signals into their respective respiratory cycle can mitigate this issue. …

The Effects Of Emerging Technology On Healthcare And The Difficulties Of Integration, Skyler J. Pavlish-Carpenter

Honors Undergraduate Theses

Background: Disruptive technology describes technology that is significantly more advanced than previous iterations, such as: 3D printing, genetic manipulation, stem cell research, innovative surgical procedures, and computer-based charting software. These technologies often require extensive overhauls to implement into older systems and must overcome many difficult financial and societal complications before they can be widely used. In a field like healthcare that makes frequent advancements, these difficulties can mean that the technology will not be utilized to its full potential or implemented at all.

Objective: To determine the inhibiting factors that prevent disruptive technology from being implemented in conventional healthcare.

Methods: …

A Structural And Functional Analysis Of Human Brain Mri With Attention Deficit Hyperactivity Disorder, Arjun A. Watane

Honors Undergraduate Theses

Attention Deficit Hyperactivity Disorder (ADHD) affects 5-10% of children worldwide. Its effects are mainly behavioral, manifesting in symptoms such as inattention, hyperactivity, and impulsivity. If not monitored and treated, ADHD may adversely affect a child's health, education, and social life. Furthermore, the neurological disorder is currently diagnosed through interviews and opinions of teachers, parents, and physicians. Because this is a subjective method of identifying ADHD, it is easily prone to error and misdiagnosis. Therefore, there is a clear need to develop an objective diagnostic method for ADHD.

The focus of this study is to explore the use of machine language …