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Portland State University

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Biomedical Engineering and Bioengineering

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Full-Text Articles in Engineering

Effect Of Bout Length On Gait Measures In People With And Without Parkinson’S Disease During Daily Life, Vrutangkumar Shah, James Mcnames, Graham Harker, Martina Mancini, Patricia Carlson-Kuhta, John G. Nutt, Mahmoud El-Gohary, Carolin Curtze, Fay Horak Oct 2020

Effect Of Bout Length On Gait Measures In People With And Without Parkinson’S Disease During Daily Life, Vrutangkumar Shah, James Mcnames, Graham Harker, Martina Mancini, Patricia Carlson-Kuhta, John G. Nutt, Mahmoud El-Gohary, Carolin Curtze, Fay Horak

Electrical and Computer Engineering Faculty Publications and Presentations

Although the use of wearable technology to characterize gait disorders in daily life is increasing, there is no consensus on which specific gait bout length should be used to characterize gait. Clinical trialists using daily life gait quality as study outcomes need to understand how gait bout length affects the sensitivity and specificity of measures to discriminate pathological gait as well as the reliability of gait measures across gait bout lengths. We investigated whether Parkinson’s disease (PD) affects how gait characteristics change as bout length changes, and how gait bout length affects the reliability and discriminative ability of gait measures …


Fabrication And Characterization Of Flexible Three-Phase Zno-Graphene-Epoxy Electro-Active Thin-Film Nanocomposites: Towards Applications In Wearable Biomedical Devices, Mandeep Singh, Sanjeev Kumar, Shervin Zoghi, Debaki Sarcar, Saquib Ahmed, Shaestagir Chowdhury, Sankha Banerjee Jul 2020

Fabrication And Characterization Of Flexible Three-Phase Zno-Graphene-Epoxy Electro-Active Thin-Film Nanocomposites: Towards Applications In Wearable Biomedical Devices, Mandeep Singh, Sanjeev Kumar, Shervin Zoghi, Debaki Sarcar, Saquib Ahmed, Shaestagir Chowdhury, Sankha Banerjee

Mechanical and Materials Engineering Faculty Publications and Presentations

Perovskite oxides have been used as sensors, actuators, transducers, for sound generation and detection, and also in optical instruments and microscopes. Perovskite halides are currently considered as optoelectronic devices such as solar cells, photodetectors, and radiation detection, but there are major issues with stability, interfacial recombination, and electron/hole mobility. The following work looks into the fabrication of non-toxic ZnO-based lead-free alternatives to perovskite oxides for use as secondary sensors or electron transport layers along with perovskite halides for application in stacked biomedical wearable devices. Three-phase, lead-free, Zinc Oxide-Graphene-Epoxy electroactive nanocomposite thin films were fabricated. The volume fraction of the Graphene …


Laboratory Versus Daily Life Gait Characteristics In Patients With Multiple Sclerosis, Parkinson’S Disease, And Matched Controls, Vrutangkumar Shah, James Mcnames, Martina Mancini, Patricia Carlson-Kuhta, Rebecca I. Spain, John G. Nutt, Mahmoud El-Gohary, Carolin Curtze, Fay Horak Jan 2020

Laboratory Versus Daily Life Gait Characteristics In Patients With Multiple Sclerosis, Parkinson’S Disease, And Matched Controls, Vrutangkumar Shah, James Mcnames, Martina Mancini, Patricia Carlson-Kuhta, Rebecca I. Spain, John G. Nutt, Mahmoud El-Gohary, Carolin Curtze, Fay Horak

Electrical and Computer Engineering Faculty Publications and Presentations

Background and purpose: Recent findings suggest that a gait assessment at a discrete moment in a clinic or laboratory setting may not reflect functional, everyday mobility. As a step towards better understanding gait during daily life in neurological populations, we compared gait measures that best discriminated people with multiple sclerosis (MS) and people with Parkinson’s Disease (PD) from their respective, age-matched, healthy control subjects (MS-Ctl, PD-Ctl) in laboratory tests versus a week of daily life monitoring.

Methods: We recruited 15 people with MS (age mean ± SD: 49 ± 10 years), 16 MS-Ctl (45 ± 11 years), 16 …


Design And Evaluation Of A Non-Contact Bed-Mounted Sensing Device For Automated In-Home Detection Of Obstructive Sleep Apnea: A Pilot Study, Clara Mosquera-Lopez, Joseph Leitschuh, John Condon, Chad C. Hagen, Uma Rajhbeharrysingh, Cody Hanks, Peter Jacobs Jan 2019

Design And Evaluation Of A Non-Contact Bed-Mounted Sensing Device For Automated In-Home Detection Of Obstructive Sleep Apnea: A Pilot Study, Clara Mosquera-Lopez, Joseph Leitschuh, John Condon, Chad C. Hagen, Uma Rajhbeharrysingh, Cody Hanks, Peter Jacobs

Electrical and Computer Engineering Faculty Publications and Presentations

We conducted a pilot study to evaluate the accuracy of a custom built non-contact pressure-sensitive device in diagnosing obstructive sleep apnea (OSA) severity as an alternative to in-laboratory polysomnography (PSG) and a Type 3 in-home sleep apnea test (HSAT). Fourteen patients completed PSG sleep studies for one night with simultaneous recording from our load-cell-based sensing device in the bed. Subjects subsequently installed pressure sensors in their bed at home and recorded signals for up to four nights. Machine learning models were optimized to classify sleep apnea severity using a standardized American Academy of Sleep Medicine (AASM) scoring of the gold …


Spatial Fingerprinting Of Biogenic And Anthropogenic Volatile Organic Compounds In An Arid Unsaturated Zone, Christopher T. Green, Wentai Luo, Christopher H. Conaway, Karl B. Haase, Ronald J. Baker Jan 2019

Spatial Fingerprinting Of Biogenic And Anthropogenic Volatile Organic Compounds In An Arid Unsaturated Zone, Christopher T. Green, Wentai Luo, Christopher H. Conaway, Karl B. Haase, Ronald J. Baker

Chemistry Faculty Publications and Presentations

Subsurface volatile organic compounds (VOCs) can pose risks to human and environmental health and mediate biological processes. Volatile organic compounds have both anthropogenic and biogenic origins, but the relative importance of these sources has not been explored in subsurface environments. This study synthesized 17 yr of VOC data from the Amargosa Desert Research Site in Nevada with the goal of improving understanding of spatial and temporal variations that distinguish sources of VOCs from a landfill and from ambient sources including biogenic VOCs (bVOCs). Gas samples were collected from 1999 to 2016 from an array of shallow sample points (0.5- and …


Early Emerging Pathogen Detection, Mackenzie Wangenstein Jan 2018

Early Emerging Pathogen Detection, Mackenzie Wangenstein

Undergraduate Research & Mentoring Program

A supervised learning technique was employed to identify emerging pathogen species. Portland State University has partnered with the University of New Mexico to take encodings of unknown pathogen molecular structures to determine emerging species.


Reactive Stepping With Functional Neuromuscular Stimulation In Response To Forward-Directed Perturbations, Alexander J. Hunt, Brooke M. Odle, Lisa M. Lombardo, Musa L. Audu, Ronald J. Triolo Jun 2017

Reactive Stepping With Functional Neuromuscular Stimulation In Response To Forward-Directed Perturbations, Alexander J. Hunt, Brooke M. Odle, Lisa M. Lombardo, Musa L. Audu, Ronald J. Triolo

Mechanical and Materials Engineering Faculty Publications and Presentations

Background: Implanted motor system neuroprostheses can be effective at increasing personal mobility of persons paralyzed by spinal cord injuries. However, currently available neural stimulation systems for standing employ patterns of constant activation and are unreactive to changing postural demands. Methods: In this work, we developed a closed-loop controller for detecting forward-directed body disturbances and initiating a stabilizing step in a person with spinal cord injury. Forward-directed pulls at the waist were detected with three body-mounted triaxial accelerometers. A finite state machine was designed and tested to trigger a postural response and apply stimulation to appropriate muscles so as to produce …


Selecting Medical Hardware Using Pairwise Comparisons: A Patient's Perspective Of Cochlear Implant Device Selection, Timothy R. Anderson, Shabnam Razeghian Jahromi Sep 2016

Selecting Medical Hardware Using Pairwise Comparisons: A Patient's Perspective Of Cochlear Implant Device Selection, Timothy R. Anderson, Shabnam Razeghian Jahromi

Engineering and Technology Management Faculty Publications and Presentations

Selecting medical hardware can be a difficult and permanent decision for patients that they are often unprepared for. The authors explore the use of pairwise comparison techniques to better inform medical decision making in an application of choosing between three major cochlear implant manufacturers. This paper appears to be the first study to apply a pairwise comparison decision making approach for cochlear implant device selection. Also, unlike many medical decision making studies that are developed by the healthcare professional, this model and analysis was conducted entirely by the patient for the purpose of making the real-world decision of a device. …


Quantitative Comparison Of A Nanoengineered Alumina Coated Cnt Arrays To Sio2 Coated Cnts And Solution Based Delivery System, Shree Aier Jan 2016

Quantitative Comparison Of A Nanoengineered Alumina Coated Cnt Arrays To Sio2 Coated Cnts And Solution Based Delivery System, Shree Aier

Undergraduate Research & Mentoring Program

To meet the growing need for nanoengineered biocompatible materials to serve as drug delivery platforms, in this research, carbon nanotube arrays were fabricated by chemical vapor deposition, followed by an alumina coating by the high yielding, tightly controlled atomic layer deposition. This nanoengineered vertically aligned alumina nanowire array serves as a platform for delivering antigens, which act as cancer adjuvants. The physicochemical characteristics of the nanowires (NWs) can significantly influence the delivery of a biomolecule to immune cells. To investigate the material characteristics, the delivery efficiency of the antigen using NWs was quantitatively assessed by flow cytometry. Further, the mechanism …


Tracking Of Rhythmical Biomedical Signals Using The Maximum A Posteriori Adaptive Marginalized Particle Filter, Sunghan Kim, Lars Andreas Holmstrom, James Mcnames Mar 2015

Tracking Of Rhythmical Biomedical Signals Using The Maximum A Posteriori Adaptive Marginalized Particle Filter, Sunghan Kim, Lars Andreas Holmstrom, James Mcnames

Electrical and Computer Engineering Faculty Publications and Presentations

Biomedical signals are often rhythmical and their morphologies change slowly over time. Arterial blood pressure and electrocardiogram signals are good examples with such property. It is of great interest to extract clinically useful information such as the instantaneous frequency (i.e. heart rate) and morphological changes (e.g. pulse pressure variation) from these signals. Conventional filtering methods such as the Kalman filter are not suitable for estimating the instantaneous frequency of quasiperiodic signals due to the non-Gaussian multi-modal property of its posterior distribution. One possible alternative is particle filters that are increasingly used for nonlinear systems and non-Gaussian posterior state distributions. However, …


Continuous Monitoring Of Movement In Patients With Parkinson's Disease Using Inertial Sensors, Mahmoud Ahmed El-Gohary, Sean Pearson, James Mcnames, Martina Mancini, Fay Horak Jan 2015

Continuous Monitoring Of Movement In Patients With Parkinson's Disease Using Inertial Sensors, Mahmoud Ahmed El-Gohary, Sean Pearson, James Mcnames, Martina Mancini, Fay Horak

Electrical and Computer Engineering Faculty Publications and Presentations

Gait impairment is a hallmark of Parkinson's disease (PD). The assessment of gait and balance in the clinic may not adequately reflect mobility in daily life. It is often reported that patients with PD walk better when they are examined in an outpatient clinic or in a research laboratory than at home. Continuous monitoring of mobility during spontaneous daily activities may provide clinicians and patients with objective measures of the quality of their mobility. We show that continuous monitoring of spontaneous gait with wearable inertial sensors during daily activities is feasible for patients with PD. We tested 13 patients with …


Biomechanical Analysis Of Concealed Pack Load Influences On Terrorist Gait Signatures Derived From Gröbner Basis Theory, Sean S. Kohles, Anum Barki, Kimberly D. Kendricks, Ronald F. Tuttle Jan 2014

Biomechanical Analysis Of Concealed Pack Load Influences On Terrorist Gait Signatures Derived From Gröbner Basis Theory, Sean S. Kohles, Anum Barki, Kimberly D. Kendricks, Ronald F. Tuttle

Biology Faculty Publications and Presentations

This project examines kinematic gait parameters as forensic predictors of the influence associated with individuals carrying concealed weighted packs up to 20% of their body weight. An initial inverse dynamics approach combined with computational algebra provided lower limb joint angles during the stance phase of gait as measured from 12 human subjects during normal walking. The following paper describes the additional biomechanical analysis of the joint angle data to produce kinetic and kinematic parameters further characterizing human motion. Results include the rotational velocities and accelerations of the hip, knee, and ankle as well as inertial moments and kinetic energies produced …


Novel Computational Approaches Characterizing Knee Physiotherapy, Wangdo Kim, Antonio P. Veloso, Duarte Araújo, Sean S. Kohles Jan 2014

Novel Computational Approaches Characterizing Knee Physiotherapy, Wangdo Kim, Antonio P. Veloso, Duarte Araújo, Sean S. Kohles

Biology Faculty Publications and Presentations

A knee joint’s longevity depends on the proper integration of structural components in an axial alignment. If just one of the components is abnormally off-axis, the biomechanical system fails, resulting in arthritis. The complexity of various failures in the knee joint has led orthopedic surgeons to select total knee replacement as a primary treatment. In many cases, this means sacrificing much of an otherwise normal joint. Here, we review novel computational approaches to describe knee physiotherapy by introducing a new dimension of foot loading to the knee axis alignment producing an improved functional status of the patient. New physiotherapeutic applications …


Continuous Monitoring Of Turning In Patients With Movement Disability, Mahmoud Ahmed El-Gohary, Sean Pearson, James Mcnames, Martina Mancini, Fay Horak, Sabato Mellone, Lorenzo Chiari Jan 2014

Continuous Monitoring Of Turning In Patients With Movement Disability, Mahmoud Ahmed El-Gohary, Sean Pearson, James Mcnames, Martina Mancini, Fay Horak, Sabato Mellone, Lorenzo Chiari

Electrical and Computer Engineering Faculty Publications and Presentations

Difficulty with turning is a major contributor to mobility disability and falls in people with movement disorders, such as Parkinson’s disease (PD). Turning often results in freezing and/or falling in patients with PD. However, asking a patient to execute a turn in the clinic often does not reveal their impairments. Continuous monitoring of turning with wearable sensors during spontaneous daily activities may help clinicians and patients determine who is at risk of falls and could benefit from preventative interventions. In this study, we show that continuous monitoring of natural turning with wearable sensors during daily activities inside and outside the …


Efferent Copy And Corollary Discharge Motor Control Behavior Associated With A Hopping Activity, Wangdo Kim, António P. Veloso, Filipa João, Sean S. Kohles Jul 2013

Efferent Copy And Corollary Discharge Motor Control Behavior Associated With A Hopping Activity, Wangdo Kim, António P. Veloso, Filipa João, Sean S. Kohles

Mechanical and Materials Engineering Faculty Publications and Presentations

Hoppers respond not only to stimuli from the ground surfaces but also to cues generated by their own behaviors. This leads to desensitization because although the afferent and reafferent signals have distinct causes, they are carried by the same sensory channels. From a behavioral viewpoint, it may be necessary to distinguish between signals from the two causes especially when monitoring changes in the external environment separate from those due to self-movement. We were able to separate afferent sensory stimuli from self-generated, reafferent signals using an action oriented perception system and dynamic programming approach. This effort addressed the question of how …


Tracking Knee Joint Functional Axes Through Tikhonov Filtering And Plűcker Coordinates, Wangdo Kim, Yoon-Hyuk Kim, António P. Veloso, Sean S. Kohles Mar 2013

Tracking Knee Joint Functional Axes Through Tikhonov Filtering And Plűcker Coordinates, Wangdo Kim, Yoon-Hyuk Kim, António P. Veloso, Sean S. Kohles

Mechanical and Materials Engineering Faculty Publications and Presentations

Researchers have reported several compensation methods to estimate bone and joint position from a cluster of skin-mounted markers as influenced by Soft Tissue Artifacts (STA). Tikhonov Regularization Filtering (TRF) as a means to estimate Instantaneous Screw Axes (ISA) was introduced here as a means to reduce the displacement of a rigid body to its simplest geometric form. Recent studies have suggested that the ISA of the knee, i.e., Knee Functional Axes (KFA), might be closely connected to the estimation of constraint forces such as those due to medial and lateral connective tissues. The estimations of ISAs were known to be …


Picture Of A Chelate In Exchange: The Crystal Structure Of Nahodotma, A 'Semi'-Hydrated Chelate, Katherine M. Payne, Edward J. Valente, Silvio Aime, Mauro Botta, Mark Woods Feb 2013

Picture Of A Chelate In Exchange: The Crystal Structure Of Nahodotma, A 'Semi'-Hydrated Chelate, Katherine M. Payne, Edward J. Valente, Silvio Aime, Mauro Botta, Mark Woods

Chemistry Faculty Publications and Presentations

Crystallography generally only provides static structural information. This can render it an ineffective technique for probing dynamic solution state processes. A crystal of HoDOTMA affords unique structures that effectively represent that of a lanthanide tetra-acetate chelate mid-way through the water exchange process.


Biokinetic Mechanisms Linked With Musculoskeletal Health Disparities: Stochastic Models Applying Tikhonov's Theorem To Biomolecule Homeostasis., Asit K. Saha, Yu Liang, Sean S. Kohles May 2011

Biokinetic Mechanisms Linked With Musculoskeletal Health Disparities: Stochastic Models Applying Tikhonov's Theorem To Biomolecule Homeostasis., Asit K. Saha, Yu Liang, Sean S. Kohles

Mechanical and Materials Engineering Faculty Publications and Presentations

Multiscale technology and advanced mathematical models have been developed to control and characterize physicochemical interactions, respectively, enhancing cellular and molecular engineering progress. Ongoing tissue engineering development studies have provided experimental input for biokinetic models examining the influence of static or dynamic mechanical stimuli (Saha, A. K., and Kohles, S. S., 2010, “A Distinct Catabolic to Anabolic Threshold Due to Single-Cell Nanomechanical Stimulation in a Cartilage Biokinetics Model,” J. Nanotechnol. Eng. Med., 1(3) p. 031005; 2010, “Periodic Nanomechanical Stimulation in a Biokinetics Model Identifying Anabolic and Catabolic Pathways Associated With Cartilage Matrix Homeostasis,” J. Nanotechnol. Eng. Med., 1(4), p. 041001). In …


Assessing The Prediction Potential Of An In Silico Computer Model Of Intracranial Pressure Dynamics, Wayne Wakeland, Rachel Agbeko, Kevin Vinecore, Mark Peters, Brahm Goldstein Mar 2009

Assessing The Prediction Potential Of An In Silico Computer Model Of Intracranial Pressure Dynamics, Wayne Wakeland, Rachel Agbeko, Kevin Vinecore, Mark Peters, Brahm Goldstein

Systems Science Faculty Publications and Presentations

Objective: Traumatic brain injury (TBI) frequently results in poor outcome, suggesting that new approaches are needed. We hypothesized that a patient-specific in silico computer model of intracranial pressure (ICP) dynamics may predict the ICP response to therapy.

Design: In silico model analysis of prospectively collected data.

Setting: Twenty-three and 16-bed pediatric intensive care units in two tertiary care academic hospitals.

Patients: Nine subjects with severe TBI undergoing ICP monitoring (7 M/2 F, age range 3-17 years).

Interventions: Random changes in head-of-bed (HOB) (0[degrees], 10[degrees], 20[degrees], 30[degrees], 40[degrees]) elevation and respiratory rate (to achieve a [DELTA]ETco2 = +/-3-4 mm Hg) were …


Reproducing Published Results From In Silico Computer Models Of The Acute Inflammatory Response To Severe Sepsis, Wayne W. Wakeland, Joe Fusion, Brahm Goldstein Jan 2006

Reproducing Published Results From In Silico Computer Models Of The Acute Inflammatory Response To Severe Sepsis, Wayne W. Wakeland, Joe Fusion, Brahm Goldstein

Systems Science Faculty Publications and Presentations

Recent studies describe computer simulation models of the acute or systemic inflammatory response (AIR or SIR) to severe sepsis, a condition that can lead to multiple organ failure and death. One study used an agent-based model, while the other used differential equations (DEs) to simulate a randomized clinical trial. Both studies obtained results similar to the actual results from a successful clinical drug trial of severe sepsis, suggesting that in silico (simulated) randomized clinical trials may be used to design more effective in vivo clinical trials.