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Dna Photocleavage By Acridine And Phenazine-Based Chromophores, Earl John Fields Dec 2006

Dna Photocleavage By Acridine And Phenazine-Based Chromophores, Earl John Fields

Chemistry Theses

Photodynamic therapy (PDT) is a promising approach used in the treatment of cancer, age related macular degeneration, psoriasis, and other diseases. Our research is focused on the discovery of new photonucleases for use in PDT. This study evaluates the photo-induced DNA cleaving abilities of a series of acridine and phenazine-based chromophores. The extended, aromatic ring systems of these compounds are expected to intercalate between adjoining base pairs in the DNA double-helix. Once irradiated, strand breakage, or nicking of plasmid DNA is achieved at micromolar concentrations of compound (pH 7.0 and 22 °C). Our scavenger experiments show that this process occurs …


The Application Of Weak-Anion Exchange Chromatography For The Analysis Of Organic Zwitterions Using Lc/Ms/Ms, Michael Jason Bishop Dec 2006

The Application Of Weak-Anion Exchange Chromatography For The Analysis Of Organic Zwitterions Using Lc/Ms/Ms, Michael Jason Bishop

Chemistry Theses

A rapid and accurate quantitative method was developed and validated for the analysis of four urinary organic acids with nitrogen containing functional groups, formiminoglutamic acid (FIGLU), pyroglutamic acid (PYRGLU), 5-hydroxyindoleacetic acid (5-HIAA), and 2-methylhippuric acid (2-METHIP) by liquid chromatography tandem mass spectrometry (LC/MS/MS). The chromatography was developed using a weak anion-exchange amino column that provided mixed-mode retention of the analytes. The elution gradient relied on changes in mobile phase pH over a concave gradient, without the use of counter-ions or concentrated salt buffers. A simple sample preparation was used, only requiring the dilution of urine prior to instrumental analysis. The …


Inactivation Of Choline Oxidase By Irreversible Inhibitors Or Storage Conditions, Jane Vu Hoang Aug 2006

Inactivation Of Choline Oxidase By Irreversible Inhibitors Or Storage Conditions, Jane Vu Hoang

Chemistry Theses

Choline oxidase from Arthrobacter globiformis is a flavin-dependent enzyme that catalyzes the oxidation of choline to betaine aldehyde through two sequential hydride-transfer steps. The study of this enzyme is of importance to the understanding of glycine betaine biosynthesis found in pathogenic bacterial or economic relevant crop plants as a response to temperature and salt stress in adverse environment. In this study, chemical modification of choline oxidase using two irreversible inhibitors, tetranitromethane and phenylhydrazine, was performed in order to gain insights into the active site structure of the enzyme. Choline oxidase can also be inactivated irreversibly by freezing in 20 mM …


Hexa-Aryl/Alkylsubstituted Cyclopropanes, Phong Minh Truong Jan 2006

Hexa-Aryl/Alkylsubstituted Cyclopropanes, Phong Minh Truong

Chemistry Theses

A series of penta-aryl/alkyl-1-(toluene-4-sulfonyl)-4,5-dihydro-1H-pyrazole 5a-c was synthesized by addition of methyllithium or phenylllithium followed by trapping the nitrogen anion intermediate with tosyl-fluoride to cyclic azines 2a,b. Addition of methyllithium or phenyllithium to 5a-c generated a series of hexa-aryl/alkylsubstituted-4,5-dihydro-3H-pyrazoles 6a-c. Neat thermolysis of hexa-aryl/alkylsubstituted-4,5-dihydro-3H-pyrazoles 6a-c at 200◦C produced hexa-aryl/alkylsubstituted cyclopropanes 7a-c in high yield.