Digital Commons Network^™

Examination Of Greenhouse Conditions That Influence Scale Infestation Rates On Begonia, Madeline M. Cusick

Honors College Theses

Scale insects are common pests within greenhouse and agricultural settings. I quantified scale infestation on Begonia x Richmondensis, also known as the Dragon Wing begonia, within the Armstrong Campus Greenhouse from March to November of 2023. Six different treatments accounted for variations in sunlight, humidity, and temperature within the greenhouse with the goal of determining the insect’s preferred environmental conditions. Morphological comparisons were also made between host plant Dragon Wing begonia and other begonias present within the greenhouse. Analysis indicated a significant difference in scale presence on replicate plants by zone and sunlight treatments, with more plants hosting at least …

A Novel Goat Model To Characterize Male Fertility Following Paternal Cannabidiol Exposure, Ashlyn N. Brewer, Kenneth R. Bondioli, Cathleen Williams, Clare Scully

LSU Master's Theses

Despite the increasing use of cannabidiol, both for medical and social purposes, the effect of cannabidiol on male fertility is poorly understood. Previous studies have been carried out in rodent models, but a large animal model does not exist at this time. This experiment proposes chronic cannabidiol (CBD) exposure using a goat model to understand the impact CBD has on male reproductive performance. The purpose of this project is to determine if daily exposure to CBD in male goats would impact reproductive parameters such as sperm quality and testosterone levels.

Two studies were conducted to determine the effects of CBD …

Spatial Mapping Of The Benthic Community And How It Is Used To Research Effects Of Dredging In Louisiana's Lake Borgne., Meghan Johnson

LSU Master's Theses

Benthic communities are vitally important for healthy aquatic ecosystems across Louisiana’s coast. Specifically in Lake Borgne, ecologically important species of fish like the Gulf Sturgeon (Acipenser oxyrinchus desotoi) rely on benthic macrofauna as their main food source. The purpose of this study was to determine the spatial landscape of biodiversity and abundance of the benthic macrofauna community in Lake Borgne. Environmental conditions played a key role in community structure during the study period (fall 2021 through summer 2023) with a major drought occurring in 2023. In 2023, the decline in the abundance of most benthic invertebrates and in …

The Use Of Duddingtonia Flagrans Aged In Mineral For Gastrointestinal Parasitic Nematode Control In Small Ruminants, Elisa M. Preston

LSU Master's Theses

Gastrointestinal nematodes (GIN) are a major constraint to small ruminant health and production throughout the world. Haemonchus contortus commonly known as the “barber pole worm” is a major concern for producers and veterinarians because of the severe anemia, and other clinical symptoms these worms cause. For decades, anthelmintics have been used to control the GIN burden small ruminants face. Katahdin (n=36) and Hampshire sheep (n=12) were used in a randomized block design experiment over a 30-day period. The objective of this study was to evaluate the effectiveness of Duddingtonia flagrans spores, the active ingredient in a commercial product, Bioworma® (International …

Addition And Subtraction: Coral Reproduction And Disease In A Changing Ocean, Ashley Rossin

LSU Doctoral Dissertations

Marine diseases are changing the landscapes of coral reefs particularly throughout the Western Atlantic. Stony coral tissue loss disease (SCTLD) swept through this region impacting at least 22 stony coral species. White plague (WP) is a more ephemeral disease, but still has a significant impact on coral reef health and perseverance, especially under a changing ocean. While these impacts are seen on the reef-scale, we can zoom into the tissue-level to identify disease markers for both diseases and identify their differences. This has ramifications for disease intervention, as well as mitigation strategies. Despite continuous disease outbreaks, healthy corals persist and …

Tools For Biomolecular Modeling And Simulation, Xin Yang

Mathematics Theses and Dissertations

Electrostatic interactions play a pivotal role in understanding biomolecular systems, influencing their structural stability and functional dynamics. The Poisson-Boltzmann (PB) equation, a prevalent implicit solvent model that treats the solvent as a continuum while describes the mobile ions using the Boltzmann distribution, has become a standard tool for detailed investigations into biomolecular electrostatics. There are two primary methodologies: grid-based finite difference or finite element methods and body-fitted boundary element methods. This dissertation focuses on developing fast and accurate PB solvers, leveraging both methodologies, to meet diverse scientific needs and overcome various obstacles in the field.

Role Of Toll-Like Receptor 2 In Macrophage Recognition And Response To Borrelia Burgdorferi, Yukiye A. Koide

Master's Theses

Lyme disease is the most common vector-borne disease in the US and will experience an uptick as the insect host, the ixodid tick, gains habitat with climate change. The causative agent of Lyme disease, Borrelia burgdorferi, is recognized by Toll-like receptor 2 (TLR2), which initiates the innate immune response. Here, I used ELISA and SEAP detection assays to determine that knocking out TLR2 in THP-1 macrophages reduces the amount of NFkB activation, as well as IL-10 and IL-1β secretion. Then, I used fluorescence microscopy and Incucyte assays to quantify the amount of phagocytosis performed by wild-type and knock-out THP-1 cells. …

Adherent-Invasive Escherichia Coli (Aiec) Promotes Mild Colitis In The C57bl/6 Il-10 Ko Mouse Model Of Crohn's Disease, Sarah Sm Zaw

Senior Theses

Crohn's disease (CD) is a chronic inflammatory bowel disease. Interleukin-10 knockout (IL-10 KO) mice are crucial in CD research. Adherent-invasive Escherichia coli (AIEC) is a subgroup of E. coli. In one study, IL-10 KO mice colonized with AIEC developed colitis in the distal colon compared to wild-type (WT) mice. I investigated how AIEC NC101 WT affects colitis severity in IL-10 KO mice of the C57BL/6 genetic background. Similar results in both genotypes would enhance mouse strain accessibility. Germ-free C57BL6 IL-10 KO mice were divided into groups: colonized with AIEC NC101 for 12, 15, or 18 weeks, or kept germ-free. Histopathological …

Characterization Of Rna Binding Proteins Regulating Axonal Localization Of Prenyl-Cdc42 Mrna, Ashley I. Loomis

Senior Theses

Following traumatic injury, axons in the peripheral nervous system (PNS) can spontaneously regenerate, albeit rather slowly. This regeneration requires messenger RNA (mRNA)-localization into and translation within the axons. One such mRNA originates from the CDC42 gene, which produces two mRNA splice variants: Prenyl-CDC42 and Palm-CDC42 encoding mRNAs. CDC42 promotes axon growth and regeneration by regulating actin filament polymerization in growth cones of axons. This plays an important role to support nerve regeneration in humans. The prenyl-Cdc42 mRNA is found in both central nervous system (CNS) and PNS axons, where it can be locally translated into CDC42 protein, which is subsequently …

Dissecting The Tissue-Specific Contributions To Seizures, Cardiorespiratory Dysfunction, And Sudden Death In The Kv1.1 Mouse Model Of Epilepsy Using Conditional Knockout Approaches, Kelsey Paulhus

Biological Sciences Theses and Dissertations

Sudden unexpected death in epilepsy (SUDEP), the primary cause of mortality in epilepsy, remains poorly understood. Studies suggest seizures may trigger dangerous signals affecting the heart and lungs leading to collapse and death. The Kv1.1 deficiency mouse model mirrors clinical SUDEP cases, showing spontaneous seizures, cardiorespiratory issues, and premature death. However, this model lacks regional specificity in Kv1.1 deletion, hindering insights into SUDEP’s mechanisms and anatomical substrates.

This dissertation employs three distinct conditional knockout (cKO) techniques to investigate the individual roles for the forebrain, brainstem, and heart in SUDEP related phenotypes. The findings reveal that the forebrain alone can trigger …

An Analysis On The Capacity Of Visual Art To Promote Conservation Efforts, Devi Bell

Honors Projects

In recent decades, we have become more aware of the ways in which anthropogenic actions are harming Earth’s climate, ecosystems, and overall stability. Scientists generally agree on the urgency of our situation, yet the public may find difficulty in comprehending the multitude of information on it. This study aims to educate the public on biodiversity loss and related ecological issues in Ohio by discussing these topics through the medium of visual art. Five pieces involving different scientific subject matter and art mediums were created and displayed for participants to view. Participants completed two surveys, one before viewing the art and …

Varecia Rubra (Red Ruffed Lemur) Diel Activity And Calling At Andranobe, Masoala National Park, Madagascar, Hannah Elena Hilden-Reid

Dissertations and Theses

With respect to the natural variation in abiotic and biotic conditions present between daytime and nighttime periods, many animal species show evolutionary adaptations specialized for diurnality, nocturnality, or crepuscularity. Biologists have traditionally viewed categorizations of this kind as fixed within taxonomic groups, emphasizing how intricately species’ survival is contingent on the ability to adapt to low light, high light, or twilight conditions. However, movement away from such distinct temporal niche categories began within chronobiological studies following the discovery of more flexible patterns of activity in numerous taxa during the late 1970s. This shift generated increased interest in elucidating the complex …

Ecology And Conservation Of Diamondback Terrapins In Virginia, Cypress Ambrose

Undergraduate Honors Theses

The diamondback terrapin (Malaclemys terrapin) is the only turtle species native to North America with specific morphological and physiological adaptations to estuarine environments. Along with many other pressures contributing to population declines, terrapins frequently become trapped and drown as bycatch in crab pots used in the commercial and recreational blue crab (Callinectes sapidus) fishery. A wealth of evidence supports the use of inexpensive bycatch reduction devices (BRDs) that can be attached to the entrances of these traps, which leads to a marked decrease in terrapin bycatch while not reducing crab catch dramatically. Virginia is the only …

The Interaction Of Sodium Fluoride And Sodium Selenate On The Developmental Toxicity To Xenopus Laevis And Ambystoma Maculatum Embryos, Shelby Wolfram

Theses

Amphibians play critical roles in the environment's wellness. Fluoride (F) is a widely existing environmental pollutant. It is commonly known for being added to drinking water and as a topical dose on teeth. Selenium (Se) can be found in organic and inorganic forms in nature. Many different fertilizers, pesticides, insecticides, and fungicides contain sodium selenate in them. The range selenium has between deficiency and toxicity is narrow, meaning excess exposure could cause various adverse effects in aquatic organisms. Xenopus laevis is a standard model for developmental toxicity due to being minimal maintenance, cost efficient, and having transparent embryos. Xenopus makes …

Exploring The Potential Pathogenicity Of A Type 2 Diabetes Mellitus Associated Insr Missense Variant Of Uncertain Significance Through Daf-2 In The Caenorhabditis Elegans Model, Brittany White

Theses

Type 2 diabetes mellitus (T2DM) is hallmarked by insulin resistance, with the INSR gene identified as a key player in this condition in humans. This gene is known to harbor genetic variants with a wide range of clinical significance from pathogenic to variants of uncertain significance (VUS) to benign. This project investigates a VUS associated with T2DM identified through ClinVar. A gene mutational analysis, predictive amino acid substitution analysis, and protein modeling predict INSR c.1628C>T (p. Thr543Met) to be likely pathogenic or damaging. PolyPhen-2 predicts this variant to be probably damaging (HumDiv score of 1.000).

Evolutionary conservation of the …

Analyzing Trends In Ground-Level Ozone, Keily Hart

Honors Program Theses and Research Projects

In the last few decades, concerns regarding air pollution have led to many new laws and regulations being put into place to mitigate the e↵ects of pollution on the environment and humanity as a whole. This paper analyzes several decades’ worth of ground-level ozone readings in six of the largest metropolitan areas in Texas, using data from the United States Environmental Protection Agency (EPA). These regions include the Austin-Round Rock area, Corpus Christi, the Dallas-Fort Worth-Arlington area, El Paso, the Houston-The Woodlands-Sugar Land area, and the San Antonio-New Braunfels area. We identify trends in these readings using the Jonckheere-Terpstra test. …

Exploration Of Cytotoxicity Of _Rabidosa Rabida_ Venom On Invertebrate And Vertebrate Cell Cultures, Martina Gooden

Honors Theses

Venom has been observed in thousands of species across different taxa. It can be adapted for different purposes, including prey capture or predator defense. Venom is found almost universally in spiders, but there has been little exploration of spiders that are not medically significant. Rabidosa rabida, the rabid wolf spider, is a common species whose venom has not been adequately investigated. Previous studies indicate that they do not require venom to apprehend easy prey in a laboratory setting, raising a question as to what their venom is adapted to do. To evaluate its effect on mammalian cells, L929 murine fibroblasts …

Parasite Diversity Of The King Cobra (Ophiophagus Hannah), Indian Rat Snake (Ptyas Mucosa), And Spectacled Cobra (Naja Naja), Bailey Tator

ALL - Honors Theses

Thus far, there has been little research on the parasitic biodiversity in wild reptiles, particularly in India. Research has been done on the parasite diversity of certain species, such as the King cobra (Ophiophagus hannah) and the Spectacled cobra (Naja naja), however these samples were purely from captive animals (Rajesh, 2015). This gap in knowledge is important to address because of how critical parasites are to the ecosystem and understanding their host population (Hudson, 2006). Parasites are some of the most biodiverse organisms, yet there is little work done to describe them in biodiversity hotspots such as the Western Ghats …

Documenting The Southern Range Terminus Of The Wood Frog (Lithobates Sylvaticus) In North America, Christian Braswell

Theses

The Wood Frog (Lithobates sylvaticus) holds a remarkable position in North American amphibian biology, with its range extending from the Arctic Circle down to the near sub-tropical southeastern United States. This thesis presents a novel quantitative polymerase chain reaction analysis (qPCR) primer specific to L. sylvaticus and a survey effort regarding the southernmost distribution and detection of this species in Alabama through the application of environmental DNA (eDNA) sampling techniques. By investigating historical data and employing advanced genetic methodologies, this research provides insights into the contemporary status and distribution of the Wood Frog. This research is important to …

Kinematics Of Bowing The Re-Strung Violin, Sarah Hayden

Master's Theses (2009 -)

Building upon existing research in motor learning and sensorimotor control, this thesis explores how the performance of a real-world task (playing a simple musical piece on the violin) is impacted by the spatial re-arrangement of the violin’s strings, and how performance recovers with practice (relearning). I recorded audio performances and bow kinematics as violinists with a wide range of prior skills played a familiar 2-octave G-Major arpeggio 50 times. Some subjects played all 50 arpeggios on a violin with the standard string arrangement (the control violin). Another set of subjects played the middle 30 arpeggios with a “similar” violin with …

Development And Validation Of A Vehicle Front Profile Finite Element Model To Evaluate Pedestrian Impacts, James Wolf

Master's Theses (2009 -)

In 2021, there were nearly 7500 pedestrians killed in traffic crashes in the U.S., the highest since 1981. Since the year 2000, Europe and Japan have adopted pedestrian crash protection programs for vehicles and have seen a decline in pedestrian fatalities; the U.S. has not yet adopted pedestrian crash protection and has seen an increase in pedestrian fatalities in that same time. European New Car Assessment Programme (Euro NCAP) outlines a detailed procedure for evaluations of new vehicles for pedestrian safety through headform, upper legform, and lower legform tests. Euro NCAP also uses generic finite element (FE) front-end vehicle models, …

Ecological Niche Modeling Of Endemic Texas Crayfish Species Under Current Conditions, Sarah A. Burgett

Biology Theses

Crayfish play many important roles in freshwater ecosystems such as ecosystem engineering, bioindicator, and food resource. Even though they are important to ecosystems, they are highly understudied. There has been previous work done on ecological niche modeling on Texas crayfish species, but this study takes it a step further by combining soil, climate, and hydrology variables to model the ecological niches of three endemic species: Procambarus texanus, Procambarus nueces, and Procambarus fayettei. Ecological niche models were created for the three species of interest using the program Maxent. I found that P. texanus and P. fayettei have indistinguishable …

Deciphering The Functional Connections Between The Nuclear Paraspeckle And Rad51 Homologous Recombination Proteins Using A Yeast Protein Interaction System, Eric J. Nutz

Senior Theses

Homologous recombination (HR) is a repair pathway for DNA double-stranded breaks. Mutations in HR genes contribute to genomic instability and increase the prevalence of cancer. Exploiting HR deficiency in tumor cells has led to improved synthetic lethality outcomes. RAD51 paralogue protein complexes are known to be involved with HR. Proteomic analysis of RAD51 paralogues reveals a connection to the nuclear paraspeckle. A paraspeckle is a little-known, specialized organelle found in the interchromatin space of the nucleus in mammalian cells. Its three central protein components include SFPQ, NONO, and PSPC1. RAD51D is an HR protein shown previously to interact with SFPQ …

Investigating The Expression Of Growth-Regulating Factor 2 (Grf2) In Arabidopsis Thaliana, Sophia S. Henry

Senior Theses

Arabidopsis thaliana is a model organism that is used in laboratories across the world for the study of cellular and molecular processes in plants. GROWTH-REGULATING FACTOR 2 (GRF2) is a transcription factor that promotes leaf growth in Arabidopsis. It is a member of a family of transcription factors that is conserved across all land plants. Previous studies have characterized GRF2 expression in leaves, but GRF2 expression in floral organs has not been studied as extensively. GRF2 acts redundantly with other members of the GRF transcription factor family during floral development. grf1/2/3/5 quadruple mutants show malformed gynoecia, severe fusions between floral …

Pilot Study: Effects Of Whole Body Vibrational Therapy On Equine Epaxial Muscle Soreness, Riley Leibeck

Undergraduate Honors Thesis Projects

Whole body vibrational therapy (WBV) is well-studied in people, but there is a paucity of research of its effect on horses. It is suggested that WBV use in horses increases performance, aids in recovery, and stimulates nerves, bones, and muscles in ways that normal exercise does not. The purpose of this pilot study was to determine if frequent WBV therapy sessions affect back soreness in horses using pressure algometry. Most sporthorses will experience back soreness in their careers, and it is regarded as one of the most common causes of poor performance in equine athletes. Five horses were measured for …

Time Series Modeling To Ascertain Age In Fisheries Management, Kathleen Sue Kirch

OES Theses and Dissertations

The ability to assign accurate ages of fish is important to fisheries management. Accurate ageing allows for the most reliable age-based models to be used to support sustainability and maximize economic benefit. Structures used to age include bones, scales, and most commonly ear bones (otoliths). Assigning age relies on validating putative annual marks by evaluating accretional material laid down in patterns in fish otoliths, typically by marginal increment analysis. These patterns often take the shape of a sawtooth wave with an abrupt drop in accretion yearly to form an annual band and are typically validated qualitatively. Researchers have shown keen …

Reliability Of Popliteal Artery Flow-Mediated Dilation In The Seated Position, Taskina Akhter

Rehabilitation Sciences Theses & Dissertations

Flow-mediated dilation (FMD) is a noninvasive measurement of endothelial function, which is a useful prognostic tool for cardiovascular disease risk. Despite its widespread use since 1992, the reproducibility of FMD varies widely between studies. This variability in reproducibility is especially significant in the case of the popliteal artery due to different methodological approaches. Studies perform popliteal FMD in various body positions, with the prone and seated positions most common. However, no studies have examined the reproducibility of both the seated and prone positions of the popliteal artery FMD. Therefore, the aim of this study is to examine the test-retest and …

Effects Of Balance Training On Spinal Reflexive Excitability Modulation, Corticospinal Excitability, And Balance Performance In Individuals With Chronic Ankle Instability, Sunghoon Chung

Rehabilitation Sciences Theses & Dissertations

Chronic ankle instability (CAI) is a neurophysiologic deficit resulting in diverse sensorimotor impairments. Following acute ankle sprains, pain, mechanical instability, and joint deafferentation reduce sensory input to the central nervous system (CNS). In response, the CNS sends altered motor signals to lower extremity muscles. These CNS changes contribute to various neuromuscular impairments in CAI patients, the most common of which is reduced balance performance. Specifically, CAI patients struggle to modulate spinal reflex excitability of the soleus muscle when progressing from simpler to more complex balance tasks. This overreliance on spinal reflexes results in inconsistent activation of the ankle stabilizing muscle. …

Decreasing The Antibiotic Survival Of Multi-Drug Resistant Gram-Positive Organisms, Areej Malik

Biomedical Sciences Theses & Dissertations

Biofilm production plays a crucial role in bacterial antibiotic tolerance and novel approaches are needed to combat it. The stringent response (SR), activated by nucleotide alarmones (pp)pGpp, is crucial for bacterial transcriptional reprogramming. In Clostridioides difficile, the SR is implicated in antibiotic survival, contributing to infection recurrence. Despite its known roles in sporulation and biofilm production in other bacterial species, the broader influence of the SR on C. difficile physiology remains undiscovered. This study deletes the C. difficile SR gene relQ, revealing the pivotal role of RelQ in regulating SR-dependent phenotypes in this organism. The absence of RelQ …

Maneuverability Of Cuttlefish And Squid: An Integrated Kinematic And Hydrodynamic Analysis, Alissa Marie Ganley

Biological Sciences Theses & Dissertations

Turning is important for life underwater, playing roles in predator avoidance, prey capture, locomotion, and communication. While turning abilities have been explored in many taxa, little is known about maneuverability of cephalopods, such as cuttlefishes and squids. The objectives of this dissertation include: (1) quantifying the turning abilities of cuttlefish hatchlings and determining whether there are species-specific differences; (2) examining the turning capabilities of adult cuttlefishes, with the goal of comparing adult performance with that of conspecific hatchlings; and (3) quantifying how adult neritic squids perform turns to provide a broader context of maneuvering strategies in cephalopods. To investigate turning, …