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Impact Of Large-Scale Climate Extremes On Biospheric Carbon Fluxes: An Intercomparison Based On Mstmip Data, Jakov Zscheischler, Anna M. Michalak, Christopher Schwalm, Miguel D. Mahecha, Deborah N. Huntzinger, Markus Reichstein, Gwenaëlle Berthier, Philippe Ciais, Robert B. Cook, Bassil El-Masri, Maoyi Huang, Akihiko Ito, Atul Jain, Anthony King, Huimin Lei, Chaoqun (Crystal) Lu, Jiafu Mao, Shushi Peng, Benjamin Poulter, Daniel Ricciuto, Xiaoying Shi, Bo Tao, Hanqin Tian, Nicolas Viovy, Weile Wang, Yaxing Wei, Jia Yang, Ning Zeng Jun 2014

Impact Of Large-Scale Climate Extremes On Biospheric Carbon Fluxes: An Intercomparison Based On Mstmip Data, Jakov Zscheischler, Anna M. Michalak, Christopher Schwalm, Miguel D. Mahecha, Deborah N. Huntzinger, Markus Reichstein, Gwenaëlle Berthier, Philippe Ciais, Robert B. Cook, Bassil El-Masri, Maoyi Huang, Akihiko Ito, Atul Jain, Anthony King, Huimin Lei, Chaoqun (Crystal) Lu, Jiafu Mao, Shushi Peng, Benjamin Poulter, Daniel Ricciuto, Xiaoying Shi, Bo Tao, Hanqin Tian, Nicolas Viovy, Weile Wang, Yaxing Wei, Jia Yang, Ning Zeng

Chaoqun (Crystal) Lu

Understanding the role of climate extremes and their impact on the carbon (C) cycle is increasingly a focus of Earth system science. Climate extremes such as droughts, heat waves, or heavy precipitation events can cause substantial changes in terrestrial C fluxes. On the other hand, extreme changes in C fluxes are often, but not always, driven by extreme climate conditions. Here we present an analysis of how extremes in temperature and precipitation, and extreme changes in terrestrial C fluxes are related to each other in 10 state-of-the-art terrestrial carbon models, all driven by the same climate forcing. We use model …


Cardiorespiratory Fitness Reduces The Risk Of Incident Hypertension Associated With A Parental History Of Hypertension., Robin Shook, D. C. Lee, X. Sui, V. Prasad, S. P. Hooker, T. S. Church, S. N. Blair May 2014

Cardiorespiratory Fitness Reduces The Risk Of Incident Hypertension Associated With A Parental History Of Hypertension., Robin Shook, D. C. Lee, X. Sui, V. Prasad, S. P. Hooker, T. S. Church, S. N. Blair

Robin Shook

Family history of hypertension increases the risk of an individual to develop hypertension, whereas moderate-to-high cardiorespiratory fitness has the opposite effect. However, the joint association of each on the development of hypertension is not well understood. We studied fitness and incident hypertension in 6278 participants who were given a preventative medical examination. Thirty-three percent reported a parent with hypertension, and there were 1545 cases of incident hypertension after a mean of 4.7 years. The presence of parental hypertension was associated with a 28% higher risk of developing hypertension after adjustments for age, sex, and examination year. After further adjustments for …


The Independent Association Between Diet Quality And Body Composition, Clemens Drenowatz, Robin Shook, Gregory A. Hand, James R. Hebert, Steven N. Blair May 2014

The Independent Association Between Diet Quality And Body Composition, Clemens Drenowatz, Robin Shook, Gregory A. Hand, James R. Hebert, Steven N. Blair

Robin Shook

Excess body weight is associated with an imbalance between energy expenditure and dietary intake but evidence on the association between diet quality and body composition remains equivocal. Rather than relying on differences in diet quality between overweight/obese and normal weight adults, this study examined the association between the Healthy Eating Index 2010 (HEI-2010) and body fatness on a continuous scale, independent of physical activity (PA). Further the association between components of the HEI-2010 and risk for overweight/obesity was explored. 407 adults (27.6 6 3.7 years) provided at least two 24-hour diet recalls over a period of 14 days, which were …


Moderate Cardiorespiratory Fitness Is Positively Associated With Resting Metabolic Rate In Young Adults., Robin Shook, G. A. Hand, A. E. Paluch, X. Wang, R. Moran, J. R. Hebert, C. J. Lavie, S. N. Blair May 2014

Moderate Cardiorespiratory Fitness Is Positively Associated With Resting Metabolic Rate In Young Adults., Robin Shook, G. A. Hand, A. E. Paluch, X. Wang, R. Moran, J. R. Hebert, C. J. Lavie, S. N. Blair

Robin Shook

OBJECTIVE: To determine whether moderate cardiorespiratory fitness (CRF) or moderate to vigorous physical activity (MVPA) is associated with elevations in resting metabolic rate (RMR) similar to findings previously observed in endurance athletes. PARTICIPANTS AND METHODS: Using a cross-sectional design, we measured CRF, RMR, body composition, energy expenditure, and time in MVPA via an arm-based activity monitor in 423 young adults (mean age, 27.6 years). Based on the results of a fitness test, participants were classified into CRF tertiles (low, moderate, or high) by sex. RESULTS: There were significant differences among the low-, moderate-, and high-CRF groups for mean ± SD …


Climate And Land Use Controls On Soil Organic Carbon In The Loess Plateau Region Of China, Yaai Dang, Wei Ren, Bo Tao, Guangsheng Chen, Chaoqun (Crystal) Lu, Jia Yang, Shufen Pan, Guodong Wang, Shiqing Li, Hanqin Tian May 2014

Climate And Land Use Controls On Soil Organic Carbon In The Loess Plateau Region Of China, Yaai Dang, Wei Ren, Bo Tao, Guangsheng Chen, Chaoqun (Crystal) Lu, Jia Yang, Shufen Pan, Guodong Wang, Shiqing Li, Hanqin Tian

Chaoqun (Crystal) Lu

The Loess Plateau of China has the highest soil erosion rate in the world where billion tons of soil is annually washed into Yellow River. In recent decades this region has experienced significant climate change and policy-driven land conversion. However, it has not yet been well investigated how these changes in climate and land use have affected soil organic carbon (SOC) storage on the Loess Plateau. By using the Dynamic Land Ecosystem Model (DLEM), we quantified the effects of climate and land use on SOC storage on the Loess Plateau in the context of multiple environmental factors during the period …


Revealing The Bacterial Butyrate Synthesis Pathways By Analyzing (Meta)Genomic Data, Marius Vital, Adina Chuang Howe, James M. Tiedje Apr 2014

Revealing The Bacterial Butyrate Synthesis Pathways By Analyzing (Meta)Genomic Data, Marius Vital, Adina Chuang Howe, James M. Tiedje

Adina Howe

Butyrate-producing bacteria have recently gained attention, since they are important for a healthy colon and when altered contribute to emerging diseases, such as ulcerative colitis and type II diabetes. This guild is polyphyletic and cannot be accurately detected by 16S rRNA gene sequencing. Consequently, approaches targeting the terminal genes of the main butyrate-producing pathway have been developed. However, since additional pathways exist and alternative, newly recognized enzymes catalyzing the terminal reaction have been described, previous investigations are often incomplete. We undertook a broad analysis of butyrate-producing pathways and individual genes by screening 3,184 sequenced bacterial genomes from the Integrated Microbial …


Top 10 Research Questions Related To Energy Balance, Robin P. Shook, Gregory A. Hand, Steven N. Blair Feb 2014

Top 10 Research Questions Related To Energy Balance, Robin P. Shook, Gregory A. Hand, Steven N. Blair

Robin Shook

Obesity is the result of a mismatch between the amount of calories consumed and the amount of calories expended during an extended period of time. This relationship is described by the energy balance equation, which states the rate of change in energy storage depots in the body are equal to the rate of energy intake minus the rate of energy expenditure. Although this relationship may appear easy to understand based on simple mathematics, in reality, a variety of known and unknown systems influence the components of energy balance (energy storage, energy intake, energy expenditure). Clearly, if a complete understanding of …


Low Fitness Partially Explains Resting Metabolic Rate Differences Between African American And White Women., Robin Shook, G. A. Hand, X. Wang, A. E. Paluch, R. Moran, J. R. Hebert, D. L. Swift, C. J. Lavie, S. N. Blair Feb 2014

Low Fitness Partially Explains Resting Metabolic Rate Differences Between African American And White Women., Robin Shook, G. A. Hand, X. Wang, A. E. Paluch, R. Moran, J. R. Hebert, D. L. Swift, C. J. Lavie, S. N. Blair

Robin Shook

BACKGROUND: High levels of obesity among African American women have been hypothesized to be partially resultant from a lower resting metabolic rate compared with white women. The aim of the current study was to determine if differences in cardiorespiratory fitness and moderate-to-vigorous physical activity are associated with differences in resting metabolic rate among free-living young adult African American women and white women. METHODS: Participants were 179 women (white women n = 141, African American women n = 38, mean age = 27.7 years). Resting metabolic rate was measured using indirect calorimetry, body composition using dual energy x-ray absorptiometry, cardiorespiratory fitness …


Semantic Calibration Of Digital Terrain Analysis Scale, Bradley A. Miller Feb 2014

Semantic Calibration Of Digital Terrain Analysis Scale, Bradley A. Miller

Bradley A Miller

Digital terrain analysis (DTA) provides efficient, repeatable, and quantified metrics of landscape characteristics that are important to the Earth sciences, particularly for detailed soil mapping applications. However, DTA has not been field tested to the extent that traditional field metrics of topography have been. Human assessment of topography synthesizes multiple parameters at multiple scales to characterize a landscape, based on field experience. In order to capture the analysis scale used by field scientists, this study introduces a method for calibrating the analysis scale of DTA to field assessments. This method is used to calibrate land-surface derivatives of relative elevation, profile …


Linking Social Behavior And Stress Physiology In Feral Mares (Equus Caballus): Group Transfers Elevate Fecal Cortisol Levels, Cassandra M.V. Nuñez, James S. Adelman, Jessica Smith, Laurence Gesquiere, Daniel I. Rubenstein Jan 2014

Linking Social Behavior And Stress Physiology In Feral Mares (Equus Caballus): Group Transfers Elevate Fecal Cortisol Levels, Cassandra M.V. Nuñez, James S. Adelman, Jessica Smith, Laurence Gesquiere, Daniel I. Rubenstein

Cassandra M.V. Nuñez

Feral horses (Equus caballus) have a complex social structure, the stability of which is important to their overall health. Behavioral and demographic research has shown that decreases in group (or band) stability reduce female fitness, but the potential effects on the physiological stress response have not been demonstrated. To fully understand how band stability affects group-member fitness, we need to understand not only behavioral and demographic, but also physiological consequences of decreases to that stability. We studied group changes in feral mares (an activity that induces instability, including both male and female aggression) on Shackleford Banks, NC. We found that …


Tackling Soil Diversity With The Assembly Of Large, Complex Metagenomes, Adina Howe, Janet K. Jansson, Stephanie Malfatti, Susannah Tringe, James Tiedje, C. Titus Brown Jan 2014

Tackling Soil Diversity With The Assembly Of Large, Complex Metagenomes, Adina Howe, Janet K. Jansson, Stephanie Malfatti, Susannah Tringe, James Tiedje, C. Titus Brown

Adina Howe

Investigations of complex environments rely on large volumes of sequence data to adequately sample the genetic diversity of a microbial community. The assembly of short-read data into longer, more interpretable sequence currently is not possible for much of the research community because it requires specialized computational facilities. We present approaches that make de novo assembly of complex metagenomes more accessible. These approaches scale data size with community richness and subdivide the data into tractable subsets representing individual species. We applied these methods toward the assembly of two large soil metagenomes to identify important metagenomic references and show that considerably more …


The North American Carbon Program Multi-Scale Synthesis And Terrestrial Model Intercomparison Project – Part 1: Overview And Experimental Design, D. N. Huntzinger, C. Schwalm, A, M, Michalak, K. Schaefer, A. W. King, Y. Wei, A. Jacobson, S. Liu, R. B. Cook, W. M. Post, G. Berthier, D Hayes, M. Huang, A. Ito, H. Lei, Chaoqun (Crystal) Lu, J. Mao, C. H. Peng, S. Peng, B. Poulter, D. Ricciuto, X. Shi, Hanqin Tian, W. Wang, N. Zeng, F. Zhao, Q. Zhu Dec 2013

The North American Carbon Program Multi-Scale Synthesis And Terrestrial Model Intercomparison Project – Part 1: Overview And Experimental Design, D. N. Huntzinger, C. Schwalm, A, M, Michalak, K. Schaefer, A. W. King, Y. Wei, A. Jacobson, S. Liu, R. B. Cook, W. M. Post, G. Berthier, D Hayes, M. Huang, A. Ito, H. Lei, Chaoqun (Crystal) Lu, J. Mao, C. H. Peng, S. Peng, B. Poulter, D. Ricciuto, X. Shi, Hanqin Tian, W. Wang, N. Zeng, F. Zhao, Q. Zhu

Chaoqun (Crystal) Lu

Terrestrial biosphere models (TBMs) have become an integral tool for extrapolating local observations and understanding of land–atmosphere carbon exchange to larger regions. The North American Carbon Program (NACP) Multi-scale synthesis and Terrestrial Model Intercomparison Project (MsTMIP) is a formal model intercomparison and evaluation effort focused on improving the diagnosis and attribution of carbon exchange at regional and global scales. MsTMIP builds upon current and past synthesis activities, and has a unique framework designed to isolate, interpret, and inform understanding of how model structural differences impact estimates of carbon uptake and release. Here we provide an overview of the MsTMIP effort …


Interplay Of Hydrogen Bonds And N→Π* Interactions In Proteins, Gail J. Bartlett, Robert W. Newberry, Brett Vanveller, Ronald T. Raines, Derek N. Woolfson Nov 2013

Interplay Of Hydrogen Bonds And N→Π* Interactions In Proteins, Gail J. Bartlett, Robert W. Newberry, Brett Vanveller, Ronald T. Raines, Derek N. Woolfson

Brett VanVeller

Protein structures are stabilized by multiple weak interactions, including the hydrophobic effect, hydrogen bonds, electrostatic effects, and van der Waals interactions. Among these interactions, the hydrogen bond is distinct in having its origins in electron delocalization. Recently, another type of electron delocalization, the n→π* interaction between carbonyl groups, has been shown to play a role in stabilizing protein structure. Here we examine the interplay between hydrogen bonding and n→π* interactions. To address this issue, we used data available from high-resolution protein crystal structures to interrogate asparagine side-chain oxygen atoms that are both acceptors of a hydrogen bond and donors of …


A Free-Ranging, Feral Mare Equus Caballus Affords Similar Maternal Care To Her Genetic And Adopted Offspring, Cassandra M.V. Nuñez, James S. Adelman, Daniel I. Rubenstein Nov 2013

A Free-Ranging, Feral Mare Equus Caballus Affords Similar Maternal Care To Her Genetic And Adopted Offspring, Cassandra M.V. Nuñez, James S. Adelman, Daniel I. Rubenstein

Cassandra M.V. Nuñez

Adoption of nongenetic offspring occurs in a variety of species but is rare in equids. We report a case of adoption by a free-ranging, feral mare Equus caballus and compare the maternal care received by her genetic offspring (born 1995) to that of her adopted offspring (born 1996) for the first 30 weeks of development. We compare five measures of care: (1) total time spent suckling, (2) mare aggression during suckling, (3) number of mare-terminated suckling bouts, (4) contact maintenance, and (5) mare-foal distance. For most behaviors, we detected no difference in the mare’s treatment of the two foals; however, …


Transgenic Mosquitoes Expressing A Phospholipase A(2) Gene Have A Fitness Advantage When Fed Plasmodium Falciparum-Infected Blood, Ryan C. Smith, Christopher Kizito, Jason L. Rasgon, Marcelo Jacobs-Lorena Oct 2013

Transgenic Mosquitoes Expressing A Phospholipase A(2) Gene Have A Fitness Advantage When Fed Plasmodium Falciparum-Infected Blood, Ryan C. Smith, Christopher Kizito, Jason L. Rasgon, Marcelo Jacobs-Lorena

Ryan C. Smith

Genetically modified mosquitoes have been proposed as an alternative strategy to reduce the heavy burden of malaria. In recent years, several proof-of-principle experiments have been performed that validate the idea that mosquitoes can be genetically modified to become refractory to malaria parasite development. We have created two transgenic lines of Anophelesstephensi, a natural vector of Plasmodium falciparum, which constitutively secrete a catalytically inactive phospholipase A2 (mPLA2) into the midgut lumen to interfere with Plasmodium ookinete invasion. Our experiments show that both transgenic lines expressing mPLA2 significantly impair the development of rodent malaria parasites, but only one line impairs the development …


Detection Of Boronic Acids Through Excited-State Intramolecular Proton-Transfer Fluorescence, Matthew R. Aronoff, Brett Vanveller, Ronald T. Raines Oct 2013

Detection Of Boronic Acids Through Excited-State Intramolecular Proton-Transfer Fluorescence, Matthew R. Aronoff, Brett Vanveller, Ronald T. Raines

Brett VanVeller

Boronic acids are versatile reagents for the chemical synthesis of organic molecules. They and other boron-containing compounds can be detected readily by the interruption of the excited-state intramolecular proton transfer (ESIPT) of 10-hydroxybenzo[h]quinolone. This method is highly sensitive and selective, and useful for monitoring synthetic reactions and detecting boron-containing compounds on a solid support.


A Divalent Protecting Group For Benzoxaboroles, Brett Vanveller, Matthew R. Aronoff, Ronald T. Raines Sep 2013

A Divalent Protecting Group For Benzoxaboroles, Brett Vanveller, Matthew R. Aronoff, Ronald T. Raines

Brett VanVeller

1-Dimethylamino-8-methylaminonaphthalene is put forth as a protecting group for benzoxaboroles. The ensuing complex is fluorescent, charge-neutral, highly stable under basic conditions, stable to anhydrous acid, and readily cleavable in aqueous acid to return the free benzoxaborole.


The Genome And Developmental Transcriptome Of The Strongylid Nematode Haemonchus Contortus, Erich M. Schwarz, Pasi K. Korhonen, Bronwyn E. Campbell, Neil D. Young, Aaron R. Jex, Abdul Jabbar, Ross S. Hall, Alinda Mondal, Adina C. Howe, Jason Pell, Andreas Hofmann, Peter R. Boag, Xing-Quan Zhu, T. Ryan Gregory, Alex Loukas, Brian A. Williams, Igor Antoshechkin, C. Titus Brown, Paul W. Sternberg, Robin B. Gasser Aug 2013

The Genome And Developmental Transcriptome Of The Strongylid Nematode Haemonchus Contortus, Erich M. Schwarz, Pasi K. Korhonen, Bronwyn E. Campbell, Neil D. Young, Aaron R. Jex, Abdul Jabbar, Ross S. Hall, Alinda Mondal, Adina C. Howe, Jason Pell, Andreas Hofmann, Peter R. Boag, Xing-Quan Zhu, T. Ryan Gregory, Alex Loukas, Brian A. Williams, Igor Antoshechkin, C. Titus Brown, Paul W. Sternberg, Robin B. Gasser

Adina Howe

Background The barber's pole worm, Haemonchus contortus, is one of the most economically important parasites of small ruminants worldwide. Although this parasite can be controlled using anthelmintic drugs, resistance against most drugs in common use has become a widespread problem. We provide a draft of the genome and the transcriptomes of all key developmental stages of H. contortus to support biological and biotechnological research areas of this and related parasites. Results The draft genome of H. contortus is 320 Mb in size and encodes 23,610 protein-coding genes. On a fundamental level, we elucidate transcriptional alterations taking place throughout the life …


Iron Oxidation Stimulates Organic Matter Decomposition In Humid Tropical Forest Soils, Steven J. Hall, Whendee L. Silver Jul 2013

Iron Oxidation Stimulates Organic Matter Decomposition In Humid Tropical Forest Soils, Steven J. Hall, Whendee L. Silver

Steven J. Hall

Humid tropical forests have the fastest rates of organic matter decomposition globally, which often coincide with fluctuating oxygen (O2) availability in surface soils. Microbial iron (Fe) reduction generates reduced iron [Fe(II)] under anaerobic conditions, which oxidizes to Fe(III) under subsequent aerobic conditions. We demonstrate that Fe (II) oxidation stimulates organic matter decomposition via two mechanisms: (i) organic matter oxidation, likely driven by reactive oxygen species; and (ii) increased dissolved organic carbon (DOC) availability, likely driven by acidification. Phenol oxidative activity increased linearly with Fe(II) concentrations (P < 0.0001, pseudo R2 = 0.79) in soils sampled within and among five tropical forest sites. A similar pattern occurred in the absence of soil, suggesting an abiotic driver of this reaction. No phenol oxidative activity occurred in soils under anaerobic conditions, implying the importance of oxidants such as O2 or hydrogen peroxide (H2O2) in addition to Fe(II). Reactions between Fe(II) and H2O2 generate hydroxyl radical, a strong nonselective oxidant of organic compounds. We found increasing consumption of H2O2 as soil Fe(II) concentrations increased, suggesting that reactive oxygen species produced by Fe(II) oxidation explained variation in phenol oxidative activity among samples. Amending soils with Fe(II) at field concentrations stimulated short-term C mineralization by up to 270%, likely via a second mechanism. Oxidation of Fe(II) drove a decrease in pH and a monotonic increase in DOC; a decline of two pH units doubled DOC, likely stimulating microbial respiration. We obtained similar results by manipulating soil acidity independently of Fe(II), implying that Fe(II) oxidation affected C substrate availability via pH fluctuations, in addition to producing reactive oxygen species. Iron oxidation coupled to organic matter decomposition contributes to rapid rates of C cycling across humid tropical forests in spite of periodic O2 limitation, and may help explain the rapid turnover of complex C molecules in these soils.


Covalent Immobilization Of Lysozyme On Ethylene Vinyl Alcohol Films For Nonmigrating Antimicrobial Packaging Applications, V. Muriel-Galet, Joey N. Talbert, P. Hernandez-Munoz, R. Gavara, J. M. Goddard Jun 2013

Covalent Immobilization Of Lysozyme On Ethylene Vinyl Alcohol Films For Nonmigrating Antimicrobial Packaging Applications, V. Muriel-Galet, Joey N. Talbert, P. Hernandez-Munoz, R. Gavara, J. M. Goddard

Joey Talbert

The objective of this study was to develop a new antimicrobial film, in which lysozyme was covalently attached onto two different ethylene vinyl alcohol copolymers (EVOH 29 and EVOH 44). The EVOH surface was modified with UV irradiation treatment to generate carboxylic acid groups, and lysozyme was covalently attached to the functionalized polymer surface. Surface characterization of control and modified films was performed using attenuated total reflectance Fourier transform infrared spectroscopy (ATR-FTIR) and dye assay. The value of protein loading after attachment on the surface was 8.49 μg protein/cm2 and 5.74 μg protein/cm2 for EVOH 29 and EVOH 44, respectively, …


Adults With Greater Weight Satisfaction Report More Positive Health Behaviors And Have Better Health Status Regardless Of Bmi, Christine E. Blake, James R. Hebert, Duck-Chul Lee, Swann A. Adams, Susan E. Steck, Xuemei Sui, Jennifer L. Kuk, Meghan Baruth, Steven N. Blair Jun 2013

Adults With Greater Weight Satisfaction Report More Positive Health Behaviors And Have Better Health Status Regardless Of Bmi, Christine E. Blake, James R. Hebert, Duck-Chul Lee, Swann A. Adams, Susan E. Steck, Xuemei Sui, Jennifer L. Kuk, Meghan Baruth, Steven N. Blair

Duck-Chul Lee

Background. Prior studies suggest that weight satisfaction may preclude changes in behavior that lead to healthier weight among individuals who are overweight or obese. Objective. To gain a better understanding of complex relationships between weight satisfaction, weight-related health behaviors, and health outcomes. Design. Cross-sectional analysis of data from the Aerobics Center Longitudinal Study (ACLS). Participants. Large mixed-gender cohort of primarily white, middle-to-upper socioeconomic status (SES) adults with baseline examination between 1987 and 2002 (𝑛 19,003). Main Outcome Variables. Weight satisfaction, weight-related health behaviors, chronic health conditions, and clinical health indicators. Statistical Analyses Performed. Chi-square test, t-tests, and linear and multivariate …


Effect Of Continued Nitrogen Enrichment On Greenhouse Gas Emissions From A Wetland Ecosystem In The Sanjiang Plain, Northeast China: A 5 Year Nitrogen Addition Experiment, Changchun Song, Lili Wang, Hanqin Tian, Deyan Liu, Chaoqun (Crystal) Lu, Xiaofeng Xu, Lihua Zhang, Guisheng Yang, Zhongmei Wan Jun 2013

Effect Of Continued Nitrogen Enrichment On Greenhouse Gas Emissions From A Wetland Ecosystem In The Sanjiang Plain, Northeast China: A 5 Year Nitrogen Addition Experiment, Changchun Song, Lili Wang, Hanqin Tian, Deyan Liu, Chaoqun (Crystal) Lu, Xiaofeng Xu, Lihua Zhang, Guisheng Yang, Zhongmei Wan

Chaoqun (Crystal) Lu

Mounting evidence supports that wetland ecosystems, one of the largest carbon pools on the earth, are exposed to ample nitrogen (N) additions due to atmospheric deposition or N loading from upstream agricultural fertilizer application. However, our understanding of how N enrichment affects the fluxes of greenhouse gases (GHGs) in wetlands is weak. A 5 year N addition experiment was conducted to examine the responses of CH4 and N2O fluxes as well as ecosystem respiration from wetlands in the Sanjiang Plain, Northeast China, through 2005 to 2009. Four levels of N addition (control, 0 kg N ha−1 yr−1; low-level, 60 kg …


N→Π* Interactions Of Amides And Thioamides: Implications For Protein Stability, Robert W. Newberry, Brett Vanveller, Ilia A. Guzei, Ronald T. Raines May 2013

N→Π* Interactions Of Amides And Thioamides: Implications For Protein Stability, Robert W. Newberry, Brett Vanveller, Ilia A. Guzei, Ronald T. Raines

Brett VanVeller

Carbonyl–carbonyl interactions between adjacent backbone amides have been implicated in the conformational stability of proteins. By combining experimental and computational approaches, we show that relevant amidic carbonyl groups associate through an n→π* donor–acceptor interaction with an energy of at least 0.27 kcal/mol. The n→π* interaction between two thioamides is 3-fold stronger than between two oxoamides due to increased overlap and reduced energy difference between the donor and acceptor orbitals. This result suggests that backbone thioamide incorporation could stabilize protein structures. Finally, we demonstrate that intimate carbonyl interactions are described more completely as donor–acceptor orbital interactions rather than dipole–dipole interactions.


House Finch Populations Differ In Early Inflammatory Signaling And Pathogen Tolerance At The Peak Of Mycoplasma Gallisepticum Infection, James S. Adelman, Laila Kirkpatrick, Jessica L. Grodio, Dana M. Hawley May 2013

House Finch Populations Differ In Early Inflammatory Signaling And Pathogen Tolerance At The Peak Of Mycoplasma Gallisepticum Infection, James S. Adelman, Laila Kirkpatrick, Jessica L. Grodio, Dana M. Hawley

James S. Adelman

Host individuals and populations often vary in their responses to infection, with direct consequences for pathogen spread and evolution. While considerable work has focused on the mechanisms underlying differences in resistance—the ability to kill pathogens— we know little about the mechanisms underlying tolerance— the ability to minimize fitness losses per unit pathogen. Here, we examine patterns and mechanisms of tolerance between two populations of house finches (Haemorhous [formerly Carpodacus] mexicanus) with different histories with the bacterial pathogen Mycoplasma gallisepticum (MG). After infection in a common environment, we assessed two metrics of pathology, mass loss and eye lesion severity, as proxies …


Enterobacter-Activated Mosquito Immune Responses To Plasmodium Involve Activation Of Srpn6 In Anopheles Stephensi, Ryan C. Smith, Abraham G. Eappen, Marcelo Jacobs-Lorena May 2013

Enterobacter-Activated Mosquito Immune Responses To Plasmodium Involve Activation Of Srpn6 In Anopheles Stephensi, Ryan C. Smith, Abraham G. Eappen, Marcelo Jacobs-Lorena

Ryan C. Smith

Successful development of Plasmodium in the mosquito is essential for the transmission of malaria. A major bottleneck in parasite numbers occurs during midgut invasion, partly as a consequence of the complex interactions between the endogenous microbiota and the mosquito immune response. We previously identified SRPN6 as an immune component which restricts Plasmodium berghei development in the mosquito. Here we demonstrate that SRPN6 is differentially activated by bacteria in Anopheles stephensi, but only when bacteria exposure occurs on the lumenal surface of the midgut epithelium. Our data indicate that AsSRPN6 is strongly induced following exposure to Enterobacter cloacae, a common component …


Medial Knee Joint Loading During Stair Ambulation And Walking While Carrying Loads, M. Hall, Jason C. Gillette, G. A. Mirka Mar 2013

Medial Knee Joint Loading During Stair Ambulation And Walking While Carrying Loads, M. Hall, Jason C. Gillette, G. A. Mirka

Jason C Gillette

Carrying loads while walking or using stairs is a common activity of daily living. Knee osteoarthritis is associated with increased external knee adduction moment (KAM) during walking, so understanding how the additional challenges of stairs and carrying loads impact these moments is of value. Sixteen healthy individuals performed three types of MOTION (walking, stair ascent, stair descent) under three LOAD conditions (no load, carrying a 13.6kg front load, carrying 13.6kg load in a backpack). Three-dimensional gait analysis was used to measure KAM. Results of ANOVA showed a significant main effect of both MOTION and LOAD on peak KAM (p<0.001), but no significant MOTION×LOAD interaction (p=0.250). Peak KAM during stair ascent was about two-times those seen in stair descent (p<0.001) and was significantly higher than those seen in walking (p<0.001). Conditions with LOAD generated significantly greater KAM as compared to the no-LOAD conditions (p<0.001). These findings suggest that carrying a load of moderate magnitude while climbing stairs significantly increases the peak KAM - a risk factor associated with knee osteoarthritis.


Educational Needs Asessment And Practices Of Grocery Store Food Handlers Through Survey And Observational Data Collection, Lynn A. Robertson, Renee R. Boyer, Benjamin J. Chapman, Joseph D. Eifert, Nancy K. Franz Mar 2013

Educational Needs Asessment And Practices Of Grocery Store Food Handlers Through Survey And Observational Data Collection, Lynn A. Robertson, Renee R. Boyer, Benjamin J. Chapman, Joseph D. Eifert, Nancy K. Franz

Nancy K. Franz

Grocery store associates in deli/bakery departments prepare and serve an increasing number of ready-to eat (RTE) foods and full meals. The shift to more convenience foods and take-home meals highlights the need for effective food safety training programs in retail grocery establishments to prevent foodborne illness. Through qualitative and quantitative methods, food safety knowledge, training preferences, needs, and current practices of grocery stores deli/bakery food handlers in Southwest and Southern Virginia were explored. Deli employees (n ¼ 78) completed a 34 question survey eliciting information on demographics, food safety training needs, preferences and knowledge. In an additional phase of this …


45-Year Trends In Women's Use Of Time And Household Management Energy Expenditure., Edward Archer, Robin P. Shook, Diana M. Thomas, Timothy S. Church, Peter T. Katzmarzyk, James R. Hebert, Kerry L. Mciver, Gregory A. Hand, Carl J. Lavie, Steven N. Blair Feb 2013

45-Year Trends In Women's Use Of Time And Household Management Energy Expenditure., Edward Archer, Robin P. Shook, Diana M. Thomas, Timothy S. Church, Peter T. Katzmarzyk, James R. Hebert, Kerry L. Mciver, Gregory A. Hand, Carl J. Lavie, Steven N. Blair

Robin Shook

Context: Relationships between socio-environmental factors and obesity are poorly understood due to a dearth of longitudinal population-level research. The objective of this analysis was to examine 45-year trends in time-use, household management (HM) and energy expenditure in women. Design and Participants: Using national time-use data from women 19–64 years of age, we quantified time allocation and household management energy expenditure (HMEE) from 1965 to 2010. HM was defined as the sum of time spent in food preparation, post-meal cleaning activities (e.g., dish-washing), clothing maintenance (e.g., laundry), and general housework. HMEE was calculated using body weights from national surveys and metabolic …


Continuous, Pulsed And Disrupted Nutrient Subsidy Effects On Ecosystem Productivity, Stability, And Energy Flow, Michael J. Weber, Michael L. Brown Feb 2013

Continuous, Pulsed And Disrupted Nutrient Subsidy Effects On Ecosystem Productivity, Stability, And Energy Flow, Michael J. Weber, Michael L. Brown

Michael J Weber Dr

Resource pulses and subsidies can supply ecosystems with an important source of nutrients that supports additional productivity at multiple trophic levels. Common carp Cyprinus carpio provide ecosystems with a continuous nutrient subsidy through bioturbation and excretion but may also initiate a nutrient pulse through carcass decomposition. We examined how continuous (common carp foraging and excretion), pulsed (carcass decomposition) and disrupted (carp introduced and then removed) nutrient subsidies differed in their ability to alter nutrient availability, ecosystem productivity and stability and energy flow. Nitrogen and phosphorus availability and primary production were highest in pulsed, intermediate in continuous and lowest for disrupted …


Method And System For Lactose-Free Or Lactose-Reduced Milk And Associated Products, Production Thereof, And Associated Processes, Joseph H. Hotchkiss, Joey Talbert Jan 2013

Method And System For Lactose-Free Or Lactose-Reduced Milk And Associated Products, Production Thereof, And Associated Processes, Joseph H. Hotchkiss, Joey Talbert

Joey Talbert

A system and method capable of hydrolyzing lactose, where the system includes a support formed from a functionalized hydrophobic polymer that is covalently linked to a hydrophilic molecule covalently that is, in turn, covalently linked to an enzyme such as lactose. The method includes the steps of functionalizing a hydrophobic polymer support, covalently linking a hydrophilic molecule to said functionalized polymer support, and covalently linking an enzyme such as lactase to said hydrophilic molecule. The system and method generally relate to the field of food science and engineering and, more particularly to dairy-based food products and their production including solutions …