Social and Behavioral Sciences Commons^™

Description And Annotation Of Biomedical Experimental Data Sets: Work In Progress, Jen Ferguson

Jen Ferguson

OBJECTIVE: Collaborating with researchers and curators from The Harvard School of Public Health Bioinformatics Core (HSPH/HBC) to annotate experimental descriptions and data sets. METHODS: ISATab is an open source software suite that can be used to annotate and apply metadata to experimental data. HSPH/HBC curators create ISATab records tying together information from PubMed papers and associated data sets (GEO files). Curators annotate and describe both raw and derived data files for each investigation, as well as supplying metadata for the investigation as a whole. Once annotated, the records are validated and sent to an internal data management system. RESULTS: As …