Natural Resources and Conservation Commons^™

Resolving Time-Space Histories Of Late Cenozoic Bedrock Incision Along The Upper Colorado River, Usa, Andres Aslan, Karl E. Karlstrom, Eric Kirby, Matthew T. Heizler, Darryl E. Granger, James K. Feathers, Paul R. Hanson, Shannon A. Mahan

School of Natural Resources: Faculty Publications

The upper Colorado River basin drains the western slope of the Rocky Mountains province of North America and hosts a rich record of fluvial terraces and volcanic deposits that provide an archive of bedrock river incision since the Late Miocene. Here we present new geochronology from fluvial deposits and associated volcanic units using multiple methods (luminescence, cosmogenic-burial, 40Ar/39Ar basalt and detrital sanidine, and U/Pb detrital zircon) to reconstruct a detailed record of bedrock incision in the upper Colorado River over timescales ranging from Miocene to Late Pleistocene. Late Miocene (ca. 11–8 Ma) basalt flows perched 800–1700 m above the Colorado …

Modeling Elementary Students’ Ideas About Heredity: A Comparison Of Curricular Interventions, Cory Forbes, Dante Cisterna, Devarati Bhattacharya, Ranu Roy

School of Natural Resources: Faculty Publications

Learning about heredity is important across the K–12 continuum. However, these ideas may be challenging for students. We examined third-grade students’ ideas about heredity in the context of a new, six-week, model-based science unit that uses corn as a model organism to support students’ ideas about heredity. We analyzed data collected during implementation of the unit, including student artifacts and interviews. We compared these data to those from a pilot version of the curriculum – implemented in the prior year – that was focused on the same disciplinary concepts but was not designed around scientific modeling. Our findings illustrate levels …

Influence Of Land Cover And Soil Moisture Based Brown Ocean Effect On An Extreme Rainfall Event From A Louisiana Gulf Coast Tropical System, Udaysankar S. Nair, Eric Rappin, Emily Foshee, Warren Smith, Roger A. Pielke Sr., Rezaul Mamood, Jonathan L. Case, Clay B. Blankenship, Marshall Shepherd, Joseph A. Santanello, Dev Niyogi

School of Natural Resources: Faculty Publications

Extreme flooding over southern Louisiana in mid-August of 2016 resulted from an unusual tropical low that formed and intensified over land. We used numerical experiments to highlight the role of the ‘Brown Ocean’ effect (where saturated soils function similar to a warm ocean surface) on intensification and it’s modulation by land cover change. A numerical modeling experiment that successfully captured the flood event (control) was modified to alter moisture availability by converting wetlands to open water, wet croplands, and dry croplands. Storm evolution in the control experiment with wet antecedent soils most resembles tropical lows that form and intensify over …

Changes In Students’ Mental Models From Computational Modeling Of Gene Regulatory Networks, Joseph Dauer, Heather E. Bergan-Roller, Gretchen P. King, Mckenzie Kjose, Nicholas J. Galt, Tomáš Helikar

School of Natural Resources: Faculty Publications

Background: Computational modeling is an increasingly common practice for disciplinary experts and therefore necessitates integration into science curricula. Computational models afford an opportunity for students to investigate the dynamics of biological systems, but there is significant gap in our knowledge of how these activities impact student knowledge of the structures, relationships, and dynamics of the system. We investigated how a computational modeling activity affected introductory biology students’ mental models of a prokaryotic gene regulatory system (lac operon) by analyzing conceptual models created before and after the activity.

Results: Students’ pre-lesson conceptual models consisted of provided, system-general structures (e.g., activator, repressor) …

Retrospective Tillage Differentiation Using The Landsat-5 Tm Archive With Discriminant Analysis, Sonisa Sharma, Kundan Dhakal, Pradeep Wagle, Ayse Kilie

School of Natural Resources: Faculty Publications

Accurate and site-specific information on tillage practice is vital to understand the impacts of crop management on water quality, soil conservation, and soil carbon sequestration. Remote sensing is a cost-effective technique for surveillance and rapid assessment of tillage practice over large areas. A new empirical approach for accurately predicting tillage class using discriminant analysis (DA) on historical multitemporal Landsat-TM 5 imagery has been developed. Ground truth data were obtained from the USDA-NRCS at 48 locations (20 conventional till [CT] and 28 conservation tillage or no-till [NT]). Classification accuracies were obtained for the DA models using reflectance values of Landsat-5 TM …

Comparison Of Extraction Methods For Recovering Ancient Microbial Dna From Paleofeces, Richard Hagan, Courtney A. Hofman, Alexander Hübner, Karl Reinhard, Stephanie Schnorr, Cecil M. Lewis, Jr., Krithivasan Sankaranarayanan, Christina G. Warinner

School of Natural Resources: Faculty Publications

Objectives: Paleofeces are valuable to archeologists and evolutionary biologists for their potential to yield health, dietary, and host information. As a rich source of preserved biomolecules from host-associated microorganisms, they can also provide insights into the recent evolution and changing ecology of the gut microbiome. How- ever, there is currently no standard method for DNA extraction from paleofeces, which combine the dual challenges of complex biological composition and degraded DNA. Due to the scarcity and relatively poor preservation of paleofeces when compared with other archeological remains, it is important to use efficient methods that maximize ancient DNA (aDNA) recovery while …

Understanding Factors Related To Undergraduate Student Decision-Making About A Complex Socio-Scientific Issue: Mountain Lion Management, Ashley Alred, Jenny Dauer

School of Natural Resources: Faculty Publications

We outline an instructional strategy for supporting students’ science literacy skills using a structured decision-making tool in an interdisciplinary undergraduate course. Instructional tools support basing complex socioscientific issues decisions on a reasoned analysis of tradeoffs among multiple conflicting values rather than heuristics, such as social norms. We explored the factors related to students’ decision-making about mountain lion management by examining if students’ value orientations, identity, or knowledge predicted their management decisions before, during, and after engaging in structured decision-making where they performed a tradeoffs analysis. We found that student decision-making may align more closely to students’ value orientations and identity …

Robust Observations Of Land-To-Atmosphere Feedbacks Using The Information Flows Of Fluxnet, Tobias Gerken, Benjamin L. Ruddell, Rong Yu, Paul C. Stoy, Darren T. Drewry

School of Natural Resources: Faculty Publications

Feedbacks between atmospheric processes like precipitation and land surface fluxes including evapotranspiration are difficult to observe, but critical for understanding the role of the land surface in the Earth System. To quantify global surface-atmosphere feedbacks we use results of a process network (PN) applied to 251 eddy covariance sites from the LaThuile database to train a neural network across the global terrestrial surface. There is a strong land–atmosphere coupling between latent (LE) and sensible heat flux (H) and precipitation (P) during summer months in temperate regions, and between H and P during winter, whereas tropical rainforests show little coupling seasonality. …

Resilience Reconciled, Craig R. Allen, David G. Angeler, Brian C. Chaffin, Dirac Twidwell, Ahjond Garmestani

School of Natural Resources: Faculty Publications

Resilience scholarship continues to inspire opaque discourse and competing frameworks often inconsistent with the complexity inherent in social–ecological systems. We contend that competing conceptualizations of resilience are reconcilable, and that the core theory is useful for navigating sustainability challenges.

Resilience as a scientific concept exploded in the early 2000s and is now being adopted by a range of disciplines and by a wide diversity of actors, from city planners to networks of global protectedarea managers. Resilience concepts are now integrated within national and international calls for proposals, research initiatives and centres in both the biophysical and social sciences. However, resilience …

Drought Early Warning And The Timing Of Range Managers’ Drought Response, Tonya R. Haigh, Jason A. Otkin, Anthony Mucia, Michael Hayes, Mark E. Burbach

School of Natural Resources: Faculty Publications

'e connection between drought early warning information and the timing of rangeland managers’ response actions is not well understood. 'is study investigates U.S. Northern Plains range and livestock managers’ decision-making in response to the 2016 flash drought, by means of a postdrought survey of agricultural landowners and using the Protective Action Decision Model theoretical framework. 'e study found that managers acted in response to environmental cues, but that their responses were significantly delayed compared to when drought conditions emerged. External warnings did not influence the timing of their decisions, though on-farm monitoring and assessment of conditions did. 'ough this case …

Avian Taxonomic And Functional Diversity In Early Stage Of Longleaf Pine (Pinus Palustris) Stands Restored At Agricultural Lands: Variations In Scale Dependency, Myung-Bok Lee, Brian J. Gates, Robert J. Cooper, John P. Carroll

School of Natural Resources: Faculty Publications

In agricultural landscapes, the Longleaf Pine Initiative (LLPI) and the Bobwhite Quail Initiative (BQI) aim to restore longleaf pine forests and early successional habitats, respectively. The early stage of longleaf pine stands and grass and forb vegetation produced by a combination of both restoration programs (LLPI-BQI) may form habitat conditions favorable to early successional bird species and other birds, increasing avian diversity. We investigated how the LLPI and BQI programs affected taxonomic and functional diversity of birds and abundance of early successional birds (grassland and scrub/shrub species), and what environmental characteristics were associated with the diversity and abundance of birds. …

Untapped Capacity For Resilience In Environmental Law, Ahjond Garmestani, J. B. Ruhl, Brian C. Chaffin, Robin K. Craig, Helena F.M.W. Van Rijswick, David G. Angeler, Carl Folke, Lance Gunderson, Dirac Twidwell, Craig R. Allen

School of Natural Resources: Faculty Publications

Over the past several decades, environmental governance has made substantial progress in addressing environmental change, but emerging environmental problems require new innovations in law, policy, and governance. While expansive legal reform is unlikely to occur soon, there is untapped potential in existing laws to address environmental change, both by leveraging adaptive and transformative capacities within the law itself to enhance socialecological resilience and by using those laws to allow socialecological systems to adapt and transform. Legal and policy research to date has largely overlooked this potential, even though it offers a more expedient approach to addressing environmental change than waiting …

Abundance Estimation From Multiple Data Types For Groupliving Animals: An Example Using Dhole (Cuon Alpinus), Dusit Ngoprasert, George A. Gale, Andrew J. Tyre

School of Natural Resources: Faculty Publications

Large carnivores are declining globally and require baseline population estimates for management, however large-scale population estimation is problematic for species without unique natural marks. We used camera trap records of dhole Cuon alpinus, a group-living species, from three national parks in Thailand as a case study in which we develop integrated likelihood models to estimate abundance incorporating two different data sets, count data and detection/non-detection data. We further investigated relative biases of the models using different proportions of data with lower versus higher quality and assessed parameter identifiability. The simulations indicated that the relative bias on average across 24 tested …

Monitoring Drought Impact On Annual Forage Production In Semi-Arid Grasslands: A Case Study Of Nebraska Sandhills, Marketa Podebradska, Bruce K. Wylie, Michael J. Hayes, Brian D. Wardlow, Deborah J. Bathke, Norman B. Bliss, Devendra Dahal

School of Natural Resources: Faculty Publications

Land management practices and disturbances (e.g. overgrazing, fire) have substantial effects on grassland forage production. When using satellite remote sensing to monitor climate impacts, such as drought stress on annual forage production, minimizing land management practices and disturbance effects sends a clear climate signal to the productivity data. This study investigates the effect of this climate signal by: (1) providing spatial estimates of expected biomass under specific climate conditions, (2) determining which drought indices explain the majority of interannual variability in this biomass, and (3) developing a predictive model that estimates the annual biomass early in the growing season. To …

Ecological Correlates Of Group Integrity Among Dispersing Cliff Swallows, Stacey L. Hannebaum, Mary B. Brown, Charles R. Brown

School of Natural Resources: Faculty Publications

Breeding colonies of birds represent groups of individuals that associate during one breeding season, at least partially dissociate for the non-breeding season, and may re-associate the next year through collective settlement at another breeding site. Little is known about the extent to which colonial birds maintain group integrity when occupying different sites in different years or the benefits of long-term associations among colonial individuals. For cliff swallows (Petrochelidon pyrrhonota) in western Nebraska, USA, we examined ecological correlates and potential benefits associated with group integrity. Using a dataset of over 25,000 individuals, we found that associations between dispersing cliff swallows were …

Partitioning Spatial, Environmental, And Community Drivers Of Ecosystem Functioning, Amelie Truchy, Emma Gothe, David G. Angeler, Frauke Ecke, Ryan A. Sponseller, Mirco Bundschuh, Richard K. Johnson, Brendan G. Mckie

School of Natural Resources: Faculty Publications

Context: Community composition, environmental variation, and spatial structuring can influence ecosystem functioning, and ecosystem service delivery. While the role of space in regulating ecosystem functioning is well recognised in theory, it is rarely considered explicitly in empirical studies.

Objectives: We evaluated the role of spatial structuring within and between regions in explaining the functioning of 36 reference and human-impacted streams.

Methods: We gathered information on regional and local environmental variables, communities (taxonomy and traits), and used variance partitioning analysis to explain seven indicators of ecosystem functioning.

Results: Variation in functional indicators was explained not only by environmental variables and community …

Comparison Of Methods For Modeling Fractional Cover Using Simulated Satellite Hyperspectral Imager Spectra, Philip E. Dennison, Yi Qi, Susan K. Meerdink, Raymond F. Kokaly, David R. Thompson, Craig S.T. Daughtry, Miguel Quemada, Dar A. Roberts, Paul D. Gader, Erin B. Wetherley, Izaya Numata, Keely L. Roth

School of Natural Resources: Faculty Publications

Remotely sensed data can be used to model the fractional cover of green vegetation (GV), non-photosynthetic vegetation (NPV), and soil in natural and agricultural ecosystems. NPV and soil cover are difficult to estimate accurately since absorption by lignin, cellulose, and other organic molecules cannot be resolved by broadband multispectral data. A new generation of satellite hyperspectral imagers will provide contiguous narrowband coverage, enabling new, more accurate, and potentially global fractional cover products. We used six field spectroscopy datasets collected in prior experiments from sites with partial crop, grass, shrub, and low-stature resprouting tree cover to simulate satellite hyperspectral data, including …

Paleoclimate Of The Subtropical Andes During The Latest Miocene, Lauca T Basin, Chile, Melina Feitl, Andrea K. Kern, Amanda Jones, Sherilyn C. Fritz, P. A. Baker, R.M. Joeckel, Wout Salenbien, Debra A. Willard

School of Natural Resources: Faculty Publications

Uplift of the Andean Cordillera during the Miocene and Pliocene produced large-scale changes in regional atmospheric circulation that impacted local ecosystems. The Lauca Basin (northern Chilean Altiplano) contains variably fluvial and lacustrine sedimentary sequences spanning the interval from 8.7 to 2.3 Ma. Field samples were collected from paleo-lacustrine sediments in the basin. Sediments were dated using detrital zircon geochronology on volcanic tuffs, yielding an age range between ~5.57 and 5.44 Ma. These new age constraints provided an opportunity to evaluate changes in the Lauca Basin ecosystem across this dynamic Miocene-Pliocene transition. We employed multiple proxies (lithofacies analysis, diatoms, pollen, and …

Globe-Lfmc, A Global Plant Water Status Database For Vegetation Ecophysiology And Wildfire Applications, Marta Yebra, Gianluca Scortechini, Abdulbaset Badi, Maria Eugenia Beget, Matthias M. Boer, Ross Bradstock, Emilio Chuvieco, F. Mark Danson, Philip Dennison, Victor Resco De Dios, Carlos M. Di Bella, Greg Forsyth, Philip Frost, Mariano Garcia, Abdelaziz Hamdi, Binbin He, Matt Jolly, Tineke Kraaij, M. Pilar Martín, Florent Mouillot, Glenn Newnham, Rachael H. Nolan, Grazia Pellizzaro, Yi Qi, Xingwen Quan, David Riaño, Dar Roberts, Momadou Sow, Susan Ustin

School of Natural Resources: Faculty Publications

Globe-LFMC is an extensive global database of live fuel moisture content (LFMC) measured from 1,383 sampling sites in 11 countries: Argentina, Australia, China, France, Italy, Senegal, Spain, South Africa, Tunisia, United Kingdom and the United States of America. The database contains 161,717 individual records based on in situ destructive samples used to measure LFMC, representing the amount of water in plant leaves per unit of dry matter. The primary goal of the database is to calibrate and validate remote sensing algorithms used to predict LFMC. However, this database is also relevant for the calibration and validation of dynamic global vegetation …

Calibration And Validation Of The Cosmic Ray Neutron Rover For Soilwater Mapping Within Two South African Land Classes, Thigesh Vather, Colin Everson, Trenton E. Franz

School of Natural Resources: Faculty Publications

Knowledge of soil water at a range of spatial scales would further our understanding of the dynamic variable and its influence on numerous hydrological applications. Cosmic ray neutron technology currently consists of the Cosmic Ray Neutron Sensor (CRNS) and the Cosmic Ray Neutron Rover (CRNR). The CRNR is an innovative tool to map surface soil water across the land surface. This research assessed the calibration and validation of the CRNR at two survey sites (hygrophilous grassland and pine forest) within the Vasi area with an area of 72 and 56 ha, respectively. The assessment of the calibrations showed that consistent …

Bibliography Of Assorted Institute Of Agriculture And Natural Resources Publications

School of Natural Resources: Faculty Publications

No abstract provided.

The Long Winter Of 1880-1881, Barbara Mayes Boustead, Martha Shulski, Steven D. Hilberg

School of Natural Resources: Faculty Publications

The story of the winter of 1880-1881 in the central United States has been retold in historical fiction, including Laura Ingalls Wilder’s The Long Winter, as well as in local histories and folklore. What story does the meteorological data tell, and how does it measure up when compared to the fiction and folklore? What were the contributing factors to the severity of the Long Winter, and has it been or could it be repeated? Examining historical and meteorological data, reconstructions, and reanalysis, including the Accumulated Winter Season Severity Index, the Long Winter emerges as one of the most severe since …

Sensitivity Analysis Of Aquifer Parameter Estimations Based On The Laplace Equation With Linearized Boundary Conditions, Jozsef Szilagyi

School of Natural Resources: Faculty Publications

No abstract provided.

Quantitative Modelling Biology Undergraduate Assessment, Robert Mayes, Kent Rittschof, Joseph Dauer, Bryon Gallant

School of Natural Resources: Faculty Publications

The Quantitative Modelling Biology Undergraduate Assessment (QM BUGS Version II) assesses undergraduate biology students’ quantitative modelling abilities and confidence. The assessment is intended to be given in undergraduate biology courses where instructors are engaging students in quantitative modelling within biological contexts. The assessment consists of 36 questions: 25 multiple choice questions addressing four subcategories within quantitative modelling understanding (Quantitative Act, Quantitative Interpretation, Quantitative Modelling, and Meta-Modelling) and 11 Likert questions addressing student confidence about modelling in biology within the four subcategories. QM BUGS assessments were piloted in multiple undergraduate biology courses at both a research intensive university and regional university …

Extinction Vortex Dynamics Of Top Predators Isolated By Urbanization, John F. Benson, Peter J. Mahoney, T. Winston Vickers, Jeff A. Sikich, Paul Beier, Seth P.D. Riley, Holly B. Ernest, Walter M. Boyce

School of Natural Resources: Faculty Publications

Extinction risk is elevated in small, isolated populations due to demographic and genetic interactions. Therefore, it is critical to model these processes realistically in population viability analyses (PVA) to inform local management and contribute to a greater understanding of mechanisms within the extinction vortex. We conducted PVA’s for two small mountain lion populations isolated by urbanization in southern California to predict population growth, extinction probability, and loss of genetic diversity with empirical data. Specifically, we (1) provide the first PVA for isolated mountain lions in the Santa Ana Mountains (SAM) that considers both demographic and genetic risk factors and (2) …

The Adaptive Cycle: More Than A Metaphor, Shana M. Sundstrom, Craig R. Allen

School of Natural Resources: Faculty Publications

The adaptive cycle and its extension to panarchy (nested adaptive cycles) has been a useful metaphor and conceptual model for understanding long-term dynamics of change in ecological and social–ecological systems. We argue that adaptive cycles are ubiquitous in complex adaptive systems because they reflect endogenously generated dynamics as a result of processes of self-organization and evolution. We synthesize work from a wide array of fields to support this claim. If dynamics of growth, conservation, collapse and renewal are endogenous dynamics of complex adaptive systems, then there ought to be signals of system change over time that reflect this. We describe …

Drought Impacts And Management In Prairie And Sandhills State Parks, Theresa M. Jedd, Devarati Bhattacharya, Cara Pesek, Michael J. Hayes

School of Natural Resources: Faculty Publications

The combination of decreased water availability and increased temperatures can interfere with outdoor activities, particularly with surface water decline and the increased risk of wildfire. Drought is a longer-term climate trend, but there is a tendency toward short-term reactions only when a drought occurs. Policy mechanisms for drought, where present, are often left to managerial discretion because they are not needed every year, and lack specific indicators. Recreator choices contribute to adaptation and public lands managers also shape drought response by monitoring meteorological trends and managing resources wisely. Despite these trends, no singular recreational drought definition exists. To understand socio-environmental …

Analysing Habitat Connectivity And Home Ranges Of Bigmouth Buffalo And Channel Catfish Using A Large-Scale Acoustic Receiver Network, Eva C. Enders, Colin Charles, Douglas A. Watkinson, Colin Kovachik, Douglas R. Leroux, Henry Hansen, Mark Pegg

School of Natural Resources: Faculty Publications

The determination if fish movement of potadromous species is impeded in a river system is often difficult, particularly when timing and extent of movements are unknown. Furthermore, evaluating river connectivity poses additional challenges. Here, we used large-scale, long-term fish movement to study and identify anthropogenic barriers to movements in the Lake Winnipeg basin including the Red, Winnipeg, and Assiniboine rivers. In the frame of the project, 80 Bigmouth Buffalo (Ictiobus cyprinellus) and 161 Channel Catfish (Ictalurus punctatus) were tagged with acoustic transmitters. Individual fish were detected with an acoustic telemetry network. Movements were subsequently analyzed using a continuous-time Markov model …

River-Wide Habitat Availability For Fish Habitat Guilds: Implications For In-Stream Flow Protection, Jonathan Spurgeon, Mark A. Pegg, Piotr Parasiewicz, Joe Rogers

School of Natural Resources: Faculty Publications

The variation in river discharge alters habitat heterogeneity with implications for the distribution of fish species with different habitat requirements. Assessments of habitat availability following changes in river discharge are difficult to apply at broad spatial scales and with relevance to multiple species. We used a MesoHABSIM modeling approach to quantify river-wide changes in habitat availability for five fish habitat guilds under three river discharge levels along the Niobrara River, NE, USA.We used a time-series of river discharge (1958–2010) to create uniform continuous under-threshold habitat duration curves that identified habitat conditions that may result in periods of stress for fish …

Seasonal Dynamics Of Lipid Metabolism And Energy Storage In The Brazilian Free-Tailed Bat, Elizabeth J. Rogers, Amie S. Sommers, Liam P. Mcguire

School of Natural Resources: Faculty Publications

As small, flying, mammalian endotherms, insectivorous bats are adapted to operate at high levels of energy expenditure. In response to seasonally variable challenges, we predicted that bats should balance energy budgets by flexibly adjusting aspects of their physiology or behavior in ways that elevate metabolic capacity. We examined variation in energy storage and pathways for oxidative metabolism in Brazilian free-tailed bats (Tadarida brasiliensis) related to estimated costs associated with reproduction and migration. We collected pectoral muscle and liver from female T. brasiliensis at six time points during the summer and fall and measured changes in the activity of four enzymes …