Physical Sciences and Mathematics Commons^™

Five Years Measuring The Muck: Evaluating Interannual Variability Of Nutrient Loads From Tidal Flooding, Alfonso Macías-Tapia, Margaret R. Mulholland, Corday R. Selden, J. Derek Loftis, Peter W. Bernhardt

OES Faculty Publications

Due to sea level rise, tidal flooding is now common in low-lying coastal systems around the world. Yet, the contribution of tidal flooding to non-point source nutrient loads and their impact on the quality of adjacent waters remains poorly constrained. Here, we quantified dissolved nutrient loading and Enterococcus abundance during annual autumnal king tides (i.e., perigean spring tides), between 2017 and 2021, in a sub-watershed of the lower Chesapeake Bay. To calculate nutrient loading from tidal flooding, we used geospatial inundation depths from a street-level hydrodynamic model to estimate floodwater volumes during each of the five sampling events and the …

The Importance Of Winter Dinoflagellate Blooms In Chesapeake Bay— A Missing Link In Bay Productivity, Nicole C. Millette, Sophie Clayton, Margaret R. Mulholland, Leah Gibala-Smith, Michael Lane

OES Faculty Publications

It is widely assumed that phytoplankton abundance and productivity decline during temperate winters because of low irradiance and temperatures. However, winter phytoplankton blooms commonly occur in temperate estuaries, but they are often undocumented because of reduced water quality monitoring in winter. The small body of in situ work that has been done on winter blooms suggests they can be of enormous consequence to ecosystems. However, because monitoring is often reduced or stopped altogether during winter, it is unclear how widespread these blooms are or how long they can last. We analyzed an over 30-year record of monthly phytoplankton monitoring samples …

A Data Repository For Clarifying Water Clarity: A Call To Use Metrics Best Suited To Corresponding Research And Management Goals In Aquatic Ecosystems (York River Estuary Case Study Dataset), Jessica S. Turner, Kelsey A. Fall, Carl T. Friedrichs

Data

This data repository is a permanent archive of the results presented in the associated publication (Turner et al. 2022, Limnology & Oceanography Letters, doi.xxxx). The objective of this study was to illustrate a water clarity phenomenon in the lower York River Estuary of the Chesapeake Bay. The data include light attenuation, Secchi depth, turbidity, and salinity from the lower York River Estuary in western Chesapeake Bay, Virginia, USA from the years 2014-2016.

Simulated Response Of St. Joseph Bay, Florida, Seagrass Meadows And Their Belowground Carbon To Anthropogenic And Climate Impacts, Marie Cindy Lebrasse, Blake A. Schaeffer, Richard C. Zimmerman, Victoria J. Hill, Megan M. Coffer, Peter J. Whitman, Wilson B. Salls, David D. Graybill, Christopher L. Osburn

OES Faculty Publications

Seagrass meadows are degraded globally and continue to decline in areal extent due to human pressures and climate change. This study used the bio-optical model GrassLight to explore the impact of climate change and anthropogenic stressors on seagrass extent, leaf area index (LAI) and belowground organic carbon (BGC) in St. Joseph Bay, Florida, using water quality data and remotely-sensed sea surface temperature (SST) from 2002 to 2020. Model predictions were compared with satellite-derived measurements of seagrass extent and shoot density from the Landsat images for the same period. The GrassLight-derived area of potential seagrass habitat ranged from 36.2 km2 …

High Resolution Remote Sensing As A Tool To Improve Coastal Habitat Mapping In The Gulf Of Maine, Gabriel Hesketh

Electronic Theses and Dissertations

The derivation of oceanographic and biological parameters from remote sensing is well documented across decades of research. Careful evaluation of satellite products provides insight into the optimal algorithms for image processing, research, and various biogeographical applications. Archived multi-satellite data from the United States Geological Survey offers users decades of continuously updated global data, and the agency has recently updated the Landsat portion of its catalog with Collection 2 files, which offers both Level 1 and Level 2 processed data products. Here, we evaluate the Collection 2 improvements using several published algorithms currently used to derive sea surface temperature, chlorophyll, and …

Impacts Of Multiple Environmental Changes On Long‐Term Nitrogen Loading From The Chesapeake Bay Watershed, Shufen Pan, Zihao Bian, Hanqin Tian, Yuanzhi Yao, Raymond G. Najjar, Marjorie A.M. Friedrichs, Eileen E. Hofmann, Rongting Xu, Bowen Zhang

CCPO Publications

Excessive nutrient inputs from land, particularly nitrogen (N), have been found to increase the occurrence of hypoxia and harmful algal blooms in coastal ecosystems. To identify the main contributors of increased N loading and evaluate the efficacy of water pollution control policies, it is essential to quantify and attribute the long‐term changes in riverine N export. Here, we use a state‐of‐the‐art terrestrial–aquatic interface model to examine how multiple environmental factors may have affected N export from the Chesapeake Bay watershed since 1900. These factors include changes in climate, carbon dioxide, land use, and N inputs (i.e., atmospheric N deposition, animal …

A Data Repository For Extent And Causes Of Chesapeake Bay Warming, Kyle E. Hinson, Marjorie A.M. Friedrichs, Pierre St-Laurent

Data

This data repository is a permanent archive of the results presented in the associated publication (Hinson et al. 2021, Journal of the American Water Resources Association, 1–21. https://doi.org/10.1111/1752-1688.12916

A Data Repository For Effects Of Reduced Shoreline Erosion On Chesapeake Bay Water Clarity, Jessica Turner, Pierre St-Laurent, Marjorie A.M. Friedrichs, Carl T. Friedrichs

Data

This data repository is a permanent archive of the results presented in the associated publication (Turner et al. 2020, Science of the Total Environment, doi: 10.1016/j.scitotenv.2021.145157).

The objective of this study was to investigate the effects of shoreline erosion on water clarity in the Chesapeake Bay. To this end, we used the Chesapeake Bay ROMS Estuarine Carbon and Biogeochemistry (ChesROMS-ECB), a biogeochemical model embedded in the Regional Ocean Modeling System (ROMS). Using this model, we simulated a Chesapeake Bay estuary from 2001-2005 with varying magnitudes of sediment inputs from shoreline erosion and varying seabed erodibility conditions. Model results were compared …

Effects Of Tidal Flooding On Estuarine Biogeochemistry: Quantifying Flood-Driven Nitrogen Inputs In An Urban, Lower Chesapeake Bay Sub-Tributary, Alfonso Macías-Tapia, Margaret R. Mulholland, Corday R. Selden, J. Derek Loftis, Peter W. Bernhardt

OES Faculty Publications

Sea level rise has increased the frequency of tidal flooding even without accompanying precipitation in many coastal areas worldwide. As the tide rises, inundates the landscape, and then recedes, it can transport organic and inorganic matter between terrestrial systems and adjacent aquatic environments. However, the chemical and biological effects of tidal flooding on urban estuarine systems remain poorly constrained. Here, we provide the first extensive quantification of floodwater nutrient concentrations during a tidal flooding event and estimate the nitrogen (N) loading to the Lafayette River, an urban tidal sub-tributary of the lower Chesapeake Bay (USA). To enable the scale of …

Water Quality Assessment In The Occurrence Of Acanthaster Spp. (Crown-Of-Thorns Starfish, Cots) On Coral Reefs In Menjangan Island, Bali, Indonesia, Novia Arinda Pradisty, Eghbert Elvan Ampou, Rizki Hanintyo

Makara Journal of Science

Aquatic stressors are known to cause biological impairment that can result in biodiversity loss in several Marine Protected Areas (MPA), including in Menjangan Island, West Bali National Park. The objectives of this study were to correlate the changes in water quality parameters with the biological effect of Crown-of-Thorns starfish (CoTS) population dynamics and to assess the most applicable parameters for continuous environmental monitoring. Field observations and surveys were conducted three times in 2017, during the wet season, dry season and season transition, in order to assess the effect of seasonal variability. Redundancy Analysis (RDA) was performed to determine the relationship …

Participatory Modeling Of Tidal Circulation On Maine Mudflats To Improve Water Quality Management Of Shellfish Areas, Gabrielle V. Hillyer

Electronic Theses and Dissertations

Over the past decade, researchers have become increasingly aware of the vital role stakeholder knowledge plays in understanding complex social and environmental problems. Incorporating stakeholder knowledge into understanding complex problems allows for greater awareness and identification of community needs and can help build partnerships to support the development of applied research. In this thesis, I demonstrate the value of stakeholder knowledge and research partnerships by focusing on the soft-shell clamming industry in Maine and how a complex collaboration between clammers, municipal officials, representatives from state agencies, researchers, and other partners relied on and build adaptive capacity to address complex water …

Character And Water Quality Of Sandpiper Pond: A Coastal Pond Assessment, Fifteen Years After Restoration, Nicholas E. Workman

Honors Theses

Sandpiper Pond is a coastal pond at Huntington Beach State Park, South Carolina. Originally a tidal inlet surrounded by marshland, it was isolated in 1989 and rechanneled in 2004-2005 under a community-based wetland restoration project. The project was designed to restore the pond to a tidal inlet to improve water quality and biodiversity. Since then, the tidal connection with the ocean has been severed once more and the main influx of seawater occurs from the marsh during spring high tides. In this three-month study, the current state of Sandpiper Pond is evaluated using fundamental biogeochemical indicators that are indicative of …

Wamsi 2 - Kmrp [Kimberley Marine Research Program] Project 2.2.9: Historical Water Quality Using Sediment Records, John Keesing, Dongyan Liu, Zineng Yuan, Yajun Peng, Yujue Wang, Pierre Richard, Pere Masque´, Yingjun Che, Yin Fang

Research Datasets

The remote Kimberley coast of north-western Australia is one of the few marine environments domains on earth largely unaffected by human use. However, the region is undergoing increasing economic importance as a destination for tourism and significant coastal developments associated with oil and gas exploration. The objective of the project was to reconstruct a timeline of inferred water quality changes from the sediment record for a selected set of sites in the Kimberley, Western Australia. The project made use of palaeoecological approaches to reconstruct a chronology of change over the last approximately 100 years using a series of biogeochemical proxies …

Next Generation Sequencing Methods For Coastal Zone Water Quality Monitoring, Catherine Iskrenko

HCNSO Student Capstones

When analyzing the water quality of the coastal zone, culture-based techniques have been utilized most often to identify Fecal Indicator Bacteria in samples. Since the advent of the Sanger Method for DNA sequencing, other techniques have arisen that provide significantly more information on the microorganisms in sample, but they are still not the mainstream for water quality analysis. This capstone reviews and compares culture-based techniques, DNA sequencing, RNA sequencing, qPCR for biomarker, and 16S rDNA sequencing to highlight their merits and shortcomings for analyzing environmental water samples. The technique presented that provides the broadest range of information (including the identification …

Assessment Of Hydrodynamic And Water Quality Impacts For Channel Deepening In The Thimble Shoals, Norfolk Harbor, And Elizabeth River Channels : Final Report On The “Hydrodynamic Modeling”, Yinglong J. Zhang, Harry V. Wang, Fei Ye, Zhengui Wang

Reports

For over twenty years, the U. S. Army Corps of Engineers (USACE) and the Virginia Port Authority (VPA), representing the Commonwealth Secretary of Transportation, have collaborated on projects key to port development that also preserve the environmental integrity of both Hampton Roads and the Elizabeth River. The USACE and the VPA are working to investigate channel deepening in this region to provide access to a new generation of cargo ships (e.g., Panamax-class). The main goal of this project is to investigate the feasibility for Norfolk Harbor channel deepening in the lower James and Elizabeth Rivers and assess the environmental impact …

Assessment Of Hydrodynamic And Water Quality Impacts For Channel Deepening In The Thimble Shoals, Norfolk Harbor, And Elizabeth River Channels, Jian Shen, Rico Wang, Mac Sisson

Reports

To investigate the feasibility for Norfolk Harbor channel deepening in the lower James and Elizabeth Rivers, one of the key services of the project is to evaluate the impacts of deepening the Atlantic Ocean Channel to 55 feet (from 50 feet), Thimble Shoal Channel to 55 feet (from 50 feet), Elizabeth River (north of Lambert Point) to 50 feet (from 45 feet) and the Southern Branch (north of the I64 Bridge) to 50/45/45 feet. In general, the shipping channel dredging will result in enhancement of estuarine gravitational circulation, accentuate the tidal and wind wave influence upstream, and affect the ecosystem …

Historical Reconstructions Of Water Quality In The Kimberley Using Sediment Records. Report Of 2.2.9 Prepared For The Kimberley Marine Research Program, John Keesing, Dongyan Liu, Zineng Yuan, Yajun Peng, Yujue Wang, Pierre Richard, Pere Masque´, Yingjun Chen, Yin Fang

Research outputs 2014 to 2021

This project made use of a suite of palaeoecological approaches to reconstruct a chronology of change in coastal water quality over the last approximately 100 years. The biogeochemical proxies addressed phytoplankton composition and biomass, temperature and terrestrial influences. Where possible these were matched to historical land/water use, meteorological or hydrological observational records.

The project examined sediment cores from three coastal locations in the Kimberley region, Koolama Bay (King George River), Cygnet Bay and Roebuck Bay. Each sampling location provided a contrast with which to evaluate changes over either a spatial or temporal gradient of human or natural influences.

Aims

• Reconstruct …

Crowdsourcing Water Quality Data Using The Iphone Camera, Thomas Leeuw

Electronic Theses and Dissertations

The ubiquity and advanced computing power of smartphones make them a potential tool for environmental monitoring on a global scale. In an attempt to tap this resource, a water quality application (HydroColor) was developed. Hydro- Color uses the iPhone’s digital color camera as a primitive three-band radiometer. Using three images taken by the user, HydroColor calculates the remote sensing reflectance in the red, green, and blue color channels of the camera. The absolute or relative reflectance between channels can be used to obtain estimates of chlorophyll, turbidity, suspended particle material, and the backscattering coefficient. In the future, HydroColor will be …

Mass Bays Resource Inventory: Summary And Findings From The Review Of Plans And Assessments, Urban Harbors Institute, University Of Massachusetts Boston

Urban Harbors Institute Publications

The Massachusetts Bays Program (MBP) contracted with the Urban Harbors Institute (UHI) of the University of Massachusetts Boston to conduct a review of papers, presentations, reports, and other relevant material produced from 1996 (the last CCMP) to present, that might inform the MBP’s update of their Comprehensive Conservation and Management Plan (CCMP). The review focused on five topics identified as priority topics by the MBP: water quality, invasive species, climate change/vulnerability, continuity of estuarine habitat, and estuarine habitat protection in the geographic region of the Mass Bays Program, particularly the 47 nearshore estuaries and embayments identified in the 2012 MBP …

Nantucket Shellfish Management Plan, Kristin Uiterwyk, Steve Bliven, Dan Leavitt, Jack Wiggin, Urban Harbors Institute, University Of Massachusetts Boston

Office of Community Partnerships Posters

Nantucket’s shellfish resources are an important part of the Island’s history, culture, and economy. Nantucket waters support one of the country’s last wild-caught bay scallop fisheries. Elsewhere along the Atlantic coast, fishing pressure, habitat loss, and disease have severely depleted bay scallop populations. Although Nantucketers continue to make a living harvesting shellfish from the Island’s waters, many do so with concern for the future of the resources and the habitats that support them. Urban Harbors Institute (UHI) provided technical assistance to the community to develop a Shellfish Management Plan (SMP) that addresses issues of water quality, habitat loss, climate change, …

Human Sanitary Wastes And Waste Treatment In New York City, David J. Tonjes, Christine O'Connell, Omkar Aphale, R. Lawrence Swanson

Technology & Society Faculty Publications

Henry Hudson first sailed toNew Yorkharbor 400 years ago. Since then,New York Cityhas both affected and been affected by water quality in greaterNew YorkHarbor. In this paper, we focus on sewers, sewerage, and sewage treatment inManhattanand their effects on theHudson River. It is clear that feedbacks among drinking water quality and quantity, population, public perceptions, regulations, and estuarine water quality exist, although their strength and character have varied over time. Early land uses damaged local water supplies found on ManhattanIsland. New Yorkthen began to exploit the large fresh water resources available to its north, which helped the City to expand …

A Case History Of The Science And Management Collaboration In Understanding Hypoxia Events In Long Bay, South Carolina, Usa., Denise Sanger, Debra Hernandez, Susan Libes, George Voulgaris, Braxton Davis, Erik Smith, Rebecca Shufford, Dwayne Porter, Eric Koepfler, Joseph Bennet

George Voulgaris

Communication of knowledge between the scientific and management communities is a difficult process complicated by the distinctive nature of professional career goals of scientists and decision-makers. This article provides a case history highlighting a collaboration between the science and management communities that resulted from a response to a 2004 hypoxia, or low dissolved oxygen, event in Long Bay, off Myrtle Beach, South Carolina. A working group of scientists and decision-makers was established at the time of the event and has continued to interact to develop a firm understanding of the drivers responsible for hypoxia formation in Long Bay. Several factors …

Hyperspectral Simulation And Recovery Of Submerged Targets In Turbid Waters, Charles R. Bostater

Ocean Engineering and Marine Sciences Faculty Publications

Modeled hyperspectral reflectance signatures just above the water surface are obtained from radiative transfer models to create synthetic images of targets below the water surface. Images are displayed as 24 bit RGB images of the water surface using selected channels. Example model outputs are presented in this paper for a hyperspectral Monte Carlo and a hyperspectral layered analytical iterative model of radiative transport within turbid shallow water types. Images at the selected wavelengths or channels centered at 490, 530 and 680 nm suggests the two models provide quite similar results when displayed as RGB images. The techniques are demonstrated to …

A Review Of Phytoplankton Composition Within Chesapeake Bay And Its Tidal Estuaries, Harold G. Marshall, Lubomira Burchardt, Richard Lacouture

Biological Sciences Faculty Publications

Based on a continuous 20-year data base ofmonthly sampling in Chesapeake Bay and tidal regions of its major tributaries, 1454 phytoplankton taxa have been identified in these waters. They represent a diverse assemblage of species with a dominant diatom flora throughout the year, in addition to large seasonal representation by chlorophytes, cyanobacteria, cryptophytes and dinoflagellates. Included among this flora were 34 potential harmful or toxin producing species. The phytoplankton compositions associated with the seasonal successional patterns are discussed, in addition to characterizing the dominant floral relationships, with comparison to early composition records within the Bay. Several of the present day …