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Full-Text Articles in Physical Sciences and Mathematics
A Middle-Ware Level Client Cache For A High Performance Computing I/O Simulator, Michael Bassily
A Middle-Ware Level Client Cache For A High Performance Computing I/O Simulator, Michael Bassily
All Theses
This thesis describes the design and run time analysis of the system level middle-ware cache for Hecios. Hecios is a high performance cluster I/O simulator. With Hecios, we provide a simulation environment that accurately captures the performance characteristics of all the components in a clusterwide parallel file system. Hecios was specifically modeled after PVFS2. It was designed to be extensible and to easily allow for various component modules to be easily replaced by those that model other system types. Built around the OMNeT++ simulation package, Hecios' inner-cluster communication module is easily adaptable to any TCP/IP based protocol and all standard …
Bioanalyze: A Tool For The Simulation And Analysis Of Biological Systems, James Norman
Bioanalyze: A Tool For The Simulation And Analysis Of Biological Systems, James Norman
All Theses
Scientists have turned to a more systemic approach to biology in order to fully understand the complex functionality of living organisms. Biologist and Geneticist have compiled an impressive amount of experimental data for a multitude of biological systems. Modeling and simulation of these systems has become a prominent tool in the field of Systems Biology. In this paper we present a review of General Systems Theory, Systems Biology, and introduce BioAnalyze. BioAnalyze is a web application designed to simulate, and analyze, the functional dynamics of biological systems.