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Physical Sciences and Mathematics Commons™
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Full-Text Articles in Physical Sciences and Mathematics
Neuronbank: A Tool For Cataloging Neuronal Circuitry, Paul S. Katz, Robert Calin-Jageman, Akshaye Dhawan, Chad Frederick, Shuman Guo, Rasanjalee Dissanayaka, Naveen Hiremath, Wenjun Ma, Xiuyn Shen, Hsui C. Wang, Hong Yang, Sushil Prasad, Rajshekhar Sunderraman, Ying Zhu
Neuronbank: A Tool For Cataloging Neuronal Circuitry, Paul S. Katz, Robert Calin-Jageman, Akshaye Dhawan, Chad Frederick, Shuman Guo, Rasanjalee Dissanayaka, Naveen Hiremath, Wenjun Ma, Xiuyn Shen, Hsui C. Wang, Hong Yang, Sushil Prasad, Rajshekhar Sunderraman, Ying Zhu
Computer Science Faculty Publications
The basic unit of any nervous system is the neuron. Therefore, understanding the operation of nervous systems ultimately requires an inventory of their constituent neurons and synaptic connectivity, which form neural circuits. The presence of uniquely identifi able neurons or classes of neurons in many invertebrates has facilitated the construction of cellular-level connectivity diagrams that can be generalized across individuals within a species. Homologous neurons can also be recognized across species. Here we describe NeuronBank.org, a web-based tool that we are developing for cataloging, searching, and analyzing neuronal circuitry within and across species. Information from a single species is represented …
A Domain-Specific Conceptual Query System, Xiuyun Shen
A Domain-Specific Conceptual Query System, Xiuyun Shen
Computer Science Theses
This thesis presents the architecture and implementation of a query system resulted from a domain-specific conceptual data modeling and querying methodology. The query system is built for a high level conceptual query language that supports dynamically user-defined domain-specific functions and application-specific functions. It is DBMS-independent and can be translated to SQL and OQL through a normal form. Currently, it has been implemented in neuroscience domain and can be applied to any other domain.