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Full-Text Articles in Physical Sciences and Mathematics

Model-Based Deep Siamese Autoencoder For Clustering Single Cell Rna-Seq Data, Zixia Meng May 2020

Model-Based Deep Siamese Autoencoder For Clustering Single Cell Rna-Seq Data, Zixia Meng

Theses

In the biological field, the smallest unit of organisms in most biological systems is the single cell, and the classification of cells is an everlasting problem. A central task for analysis of single-cell RNA-seq data is to identify and characterize novel cell types. Currently, there are several classical methods, such as K-means algorithm, spectral clustering, and Gaussian Mixture Models (GMMs), which are widely used to cluster the cells. Furthermore, typical dimensional reduction methods such as PCA, t-SNE, and ZIDA have been introduced to overcome “the curse of dimensionality”. A more recent method scDeepCluster has demonstrated improved and promising performances in …


Content Based Image Retrieval (Cbir) For Brand Logos, Enjal Parajuli May 2020

Content Based Image Retrieval (Cbir) For Brand Logos, Enjal Parajuli

Boise State University Theses and Dissertations

This thesis explores the problem of automatically detecting the presence of logos in general images. Brand logos carry the goodwill of a company and are considered to be of high value in the corporate world, and thus automatically determining whether or not a logo is present in an image can be of interest for companies that wish to protect their brand. The problem of automated logo detection is inherently complex, but is further complicated through intentional obfuscation of logo images, for example by color shifting or other slight image modifications that leave the logo intact and easily recognizable by a …


Representation Learning With Adversarial Latent Autoencoders, Stanislav Pidhorskyi M.S. Jan 2020

Representation Learning With Adversarial Latent Autoencoders, Stanislav Pidhorskyi M.S.

Graduate Theses, Dissertations, and Problem Reports

A large number of deep learning methods applied to computer vision problems require encoder-decoder maps. These methods include, but are not limited to, self-representation learning, generalization, few-shot learning, and novelty detection. Encoder-decoder maps are also useful for photo manipulation, photo editing, superresolution, etc. Encoder-decoder maps are typically learned using autoencoder networks.
Traditionally, autoencoder reciprocity is achieved in the image-space using pixel-wise
similarity loss, which has a widely known flaw of producing non-realistic reconstructions. This flaw is typical for the Variational Autoencoder (VAE) family and is not only limited to pixel-wise similarity losses, but is common to all methods relying upon …