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Full-Text Articles in Physical Sciences and Mathematics

X-Ray Absorption Spectroscopy, X-Ray Diffraction And Optical Luminescence Studies Of Phase Transition Of Titania Nanotubes, Lu Yao Dec 2019

X-Ray Absorption Spectroscopy, X-Ray Diffraction And Optical Luminescence Studies Of Phase Transition Of Titania Nanotubes, Lu Yao

Electronic Thesis and Dissertation Repository

The one-dimensional (1D) TiO2 nanotubes (NTs) and their derivatives have been extensively studied due to their wide applications, such as photocatalysts, solar cell, paints and so on. Since TiO2 has a wide band gap (~3.0 eV), its photo-absorption as the photocatalyst only occurs in the UV region that wastes mostly solar energy. Therefore, the solution to higher photocatalytic efficiency has been sought for some time. This thesis presents a study of the size-dependent phase transitions of TiO2 NTs using synchrotron-based X-ray techniques. The chemical environment including local symmetry and the luminescence origin of the TiO2 NTs …


Galvanic Corrosion Of Copper-Coated Carbon Steel For Used Nuclear Fuel Containers, Thalia E. Standish Nov 2019

Galvanic Corrosion Of Copper-Coated Carbon Steel For Used Nuclear Fuel Containers, Thalia E. Standish

Electronic Thesis and Dissertation Repository

Carbon steel vessels coated with ∼3 mm of Cu have been proposed for the permanent disposal of used nuclear fuel in a deep geological repository (DGR) in Canada. In the event of an undetected defect in the Cu coating that exposes the steel substrate, galvanically accelerated corrosion of steel is, in principle, possible. To investigate this scenario, the progression of steel corrosion at the base of novel simulated through-coating defects was monitored electrochemically and imaged non-destructively using X-ray micro-computed tomography (micro-CT) as a function of time, O2 availability (including anoxic conditions), and coating method (cold spray deposition (with and …


Saponin Penetration And Interactions With Membranes, Sarai Guerrero Nov 2019

Saponin Penetration And Interactions With Membranes, Sarai Guerrero

Electronic Thesis and Dissertation Repository

The saponin QS21 has been used and studied for years as an adjuvant agent to improve vaccines for both humans and animals. However, how the saponin interacts with the membrane and itself remains poorly understood. We studied the QS21-A majority isomer using all-atom classical molecular dynamics simulations in model bilayers composed of cholesterol and either DOPC or DPPC. As this is one of the few computational studies on QS21-A, we had very few resources to compare our results to. Nevertheless, we were able to gain insight into possible configurations that QS21-A takes after penetration, the effect of the bilayer on …


Investigations Of The High Pressure Effects On Structural Properties And Co2 Adsorption Performance Of Mofs Using Vibrational Spectroscopy, Shan Jiang Nov 2019

Investigations Of The High Pressure Effects On Structural Properties And Co2 Adsorption Performance Of Mofs Using Vibrational Spectroscopy, Shan Jiang

Electronic Thesis and Dissertation Repository

The pre- and post-combustion carbon dioxide capture has drawn much attention in the past few decades owing to the increasing concentration of CO2 in the atmosphere. Among all the potential solid adsorbents for CO2 capture, metal-organic frameworks (MOFs) are a promising class of materials due to their large surface areas, high tunability and their high selectivity for gas adsorption applications. It has been widely demonstrated that the application of high external pressure in gigapascal level can substantially tune the structure, pore size and opening of porous material. Consequently, the structural, as well as gas adsorption properties of these …


Novel Avenues Toward Controlling The Photophysical Properties Of Ultra-Small Silicon Quantum Dots, Mohammed Abdelhameed Oct 2019

Novel Avenues Toward Controlling The Photophysical Properties Of Ultra-Small Silicon Quantum Dots, Mohammed Abdelhameed

Electronic Thesis and Dissertation Repository

Quantum dots (QDs) have attracted an increasing attention in the last decade over many conventional organic dyes. This is due to their unique optical properties including broad absorption spectra, high photostability, and size-tunable photoluminescence (PL). However, some toxicity concerns associated with traditional quantum dots have hindered their wide applicability. Interestingly, silicon quantum dots (SQDs) have been shown to be more advantageous than most of QDs thanks to their excellent biocompatibility and biodegradability, low cytotoxicity, and versatile surface functionalization capability. Thus, SQDs are promising candidates for various biological and biomedical applications such as bioimaging, biosensing, and photodynamic therapy. Unfortunately, only a …


Methodologies For Metal Functionalization Of Phosphorus Based Photopolymer Networks, Vanessa Béland Oct 2019

Methodologies For Metal Functionalization Of Phosphorus Based Photopolymer Networks, Vanessa Béland

Electronic Thesis and Dissertation Repository

Photopolymer networks with phosphonium cation, alkyl phosphine and olefin functionality were designed, synthesized and functionalized with metals by metathesis, coordination and hydrometallation reactions, respectively. The materials were strategically designed so that the metal functionalization step could be monitored and quantified. In some cases, this involved characterization by IR, NMR, or X-ray spectroscopic techniques, or by comparison to molecular analogues. It was found that by using a bi-functional photopolymer network, the material could be bi-metallized by orthogonal mechanisms. All metallized polymer networks were tested for their suitability as precursors to metal-containing ceramics. The polymers were pyrolyzed, and on analysis it was …


Vertical Ionization Energies From The Average Local Electron Energy Function, Amer Marwan El-Samman Sep 2019

Vertical Ionization Energies From The Average Local Electron Energy Function, Amer Marwan El-Samman

Electronic Thesis and Dissertation Repository

It is a non-intuitive but well-established fact that the first and higher vertical ionization energies (VIE) of any N-electron system are encoded in the system's ground-state electronic wave function. This makes it possible to compute VIEs of any atom or molecule from its ground-state wave function directly, without performing calculations on the (N-1)-electron states. In practice, VIEs can be extracted from the wave function by using the (extended) Koopmans' theorem or by taking the asymptotic limit of certain wave-function-based quantities such as the ratio of kinetic energy density to the electron density. However, when the wave function is expanded in …


Shape-Controlled Nanoparticles As Effective Catalysts For Proton Exchange Membrane (Pem) Fuel Cells, Ali Feizabadi Sep 2019

Shape-Controlled Nanoparticles As Effective Catalysts For Proton Exchange Membrane (Pem) Fuel Cells, Ali Feizabadi

Electronic Thesis and Dissertation Repository

Polymer electrolyte membrane fuel cell (PEMFC), is considered a promising candidate for the next generation power sources in transportation, stationary and portable applications. However, oxygen reduction reaction (ORR), one of the key reactions occurring on PEMFC is kinetically slow; this has limited performance and further advancement in this kind of fuel cells. Thus, improving the PEMFC efficiency requires a thorough understanding of the ORR mechanism on the desired catalyst. To address the above-mentioned demands, the scope of this thesis is focused on the fundamental understanding of facet-controlled nanoparticles, metal-support interactions, and bimetallic platinum catalysts, utilizing synchrotron-based X-ray absorption, X-ray photoelectron …


Synchrotron Radiation Analysis Of Daguerreotypes: Surface Characterization, Electrocleaning, And Preservation, Madalena S. Kozachuk Jul 2019

Synchrotron Radiation Analysis Of Daguerreotypes: Surface Characterization, Electrocleaning, And Preservation, Madalena S. Kozachuk

Electronic Thesis and Dissertation Repository

The first commercially viable photographic image, the daguerreotype, captured images from 1839 to 1860. While daguerreotypes provide a significant historical record of 19th century individuals and events, deterioration now disfigures many of these images. This work describes the application of synchrotron radiation (SR) to the study of daguerreotypes.

Three goals were addressed in this thesis: 1) to utilize SR to further elucidate the physics and chemistry of the daguerreotype and how the surface varies with time, 2) to study the effects of the electrocleaning system on the daguerreotype surface, and 3) to propose suggestions to improve their preservation and …


Using Molecular Dynamics To Study Qs21 Interactions And Penetration Of Lipid-Cholesterol Bilayers, Sarai Guerrero, Mikko Karttunen Jun 2019

Using Molecular Dynamics To Study Qs21 Interactions And Penetration Of Lipid-Cholesterol Bilayers, Sarai Guerrero, Mikko Karttunen

Western Research Forum

Saponins have been used as adjuvant agents for decades in vaccines and therapies, but none are as well studied or heavily used as QS-21. This achievement is notwithstanding the fact that QS-21 usage is limited by its stability, toxicity, and scarcity. These shortcomings have only pushed researchers to develop and experiment with artificial recreations of the saponin to harness its unique benefits. A considerable number of research hours have been poured into this topic, but like QS-21 there is a shortcoming here as well. The number of articles that look at QS-21 interactions with the bilayer or the conditions under …


Investigating The Rotary Mechanism Of Atp Synthase Using Molecular Dynamics Simulations, Angela Marcela Murcia Rios Apr 2019

Investigating The Rotary Mechanism Of Atp Synthase Using Molecular Dynamics Simulations, Angela Marcela Murcia Rios

Electronic Thesis and Dissertation Repository

F1-ATPase is a motor protein that can use ATP hydrolysis to drive rotation of the central subunit. The γ C-terminal helix constitutes of the rotor tip that is seated in an apical bearing formed by the α3β3 head. It remains uncertain to what extent the γ conformation during rotation differs from that seen in rigid crystal structures. Existing models assume that the entire γ subunit participates in every rotation. Here we develop a molecular dynamics (MD) strategy to model the off-axis forces acting on γ in F1-ATPase. MD runs showed stalling of the …


Corrosion Studies On Lightweight Automotive Alloys: The Effect Of Microstructure And Fundamental Mechanisms, Wilfred J. Binns Mar 2019

Corrosion Studies On Lightweight Automotive Alloys: The Effect Of Microstructure And Fundamental Mechanisms, Wilfred J. Binns

Electronic Thesis and Dissertation Repository

Owing to their excellent strength-to-weight ratio and low density, magnesium alloys have the potential to significantly reduce the weight of automobiles leading to decreased emissions and greater range for electrical vehicles. However, the practicality of magnesium alloys for automotive and aerospace applications is severely hindered by their poor corrosion resistance in aqueous environments. Despite intensive research effort, the underlying mechanism(s) responsible for this poor corrosion resistance remains elusive. Further complicating the situation is the presence of secondary microstructures which are necessary for desirable physical properties but lead to microgalvanic coupling which exacerbates the poor corrosion resistance of magnesium alloys. This …


Protein Conformations In The Gas Phase Probed By Mass Spectrometry And Molecular Dynamics Simulations, Maryam Bakhtiari Jan 2019

Protein Conformations In The Gas Phase Probed By Mass Spectrometry And Molecular Dynamics Simulations, Maryam Bakhtiari

Electronic Thesis and Dissertation Repository

Mass Spectrometry (MS) has been revolutionized by the ability to produce intact gaseous protein ions by electrospray ionization (ESI). The question to what extent these ions retain solution-like conformations under “native” ESI conditions remains a matter of debate. Traditional high-resolution structure determination techniques only report on proteins in the condensed phase. For this reason, MD simulations play an important role in exploring the behavior of gas phase proteins. In this research, mobile and non-mobile proton MD simulations along with mass spectrometry data at 300 K in both positive and negative ion mode indicated that native-like conformations were largely retained. Surface …