Physical Sciences and Mathematics Commons^™

Estimation Problems In Complex Field Studies With Deep Interactions: Time-To-Event And Local Regression Models For Environmental Effects On Vital Rates, Krzysztof M. Sakrejda

Doctoral Dissertations

Field studies that measure vital rates in context over extended time periods are a cornerstone of our understanding of population processes. These studies inform us about the relationship between biological process and environmental noise in an irreplaceable way. These data sets bring ``big data'' and ``big model'' challenges, which limit the application of standard software (e.g., \textbf{BUGS}). The environmental sensitivity of vital rates is also expected to exhibit interactions and non-linearity, which typically result in difficult model selection questions in large data sets. Finally, long-term ecological data sets often contain complex temporal structure. In commonly applied discrete-time models complex temporal …

Microbial Communities Of The Providence River, Jacqueline Kratch

Honors Projects in Science and Technology

The Providence River has been industrialized for over one-hundred years. Industries such as oil storage and metal recycling facilities have left high levels of pollutant metals, including lead (Pb), in the soil and water. The elevated Pb concentrations in these environments influence the selection of Pb resistance mechanisms in the bacterial community1. One mechanism of heavy metal resistance is the Pb efflux pump, consisting of proteins in the cell membrane that aid in the transport of Pb out of the cell2. In this study we investigated the co-occurrence of Pb efflux pumps and antibiotic efflux pumps in bacteria from Pb …

07. Criminal Justice, Northeastern State University

Oklahoma Research Day Abstracts

No abstract provided.

04. Botany, Northeastern State University

Oklahoma Research Day Abstracts

No abstract provided.

06. Computer Science, Northeastern State University

Oklahoma Research Day Abstracts

No abstract provided.

03. Biology, Northeastern State University

Oklahoma Research Day Abstracts

No abstract provided.

08. Engineering, Northeastern State University

Oklahoma Research Day Abstracts

No abstract provided.

10. Forensic Science, Northeastern State University

Oklahoma Research Day Abstracts

No abstract provided.

11. Genetics, Northeastern State University

Oklahoma Research Day Abstracts

No abstract provided.

14. Optometry, Northeastern State University

Oklahoma Research Day Abstracts

No abstract provided.

16. Physics, Northeastern State University

Oklahoma Research Day Abstracts

No abstract provided.

17. Psychology, Northeastern State University

Oklahoma Research Day Abstracts

No abstract provided.

13. Mathematics, Northeastern State University

Oklahoma Research Day Abstracts

No abstract provided.

18. Statistics, Northeastern State University

Oklahoma Research Day Abstracts

No abstract provided.

02. Animal Science, Northeastern State University

Oklahoma Research Day Abstracts

No abstract provided.

05. Chemistry, Northeastern State University

Oklahoma Research Day Abstracts

No abstract provided.

09. Environmental Science, Northeastern State University

Oklahoma Research Day Abstracts

No abstract provided.

12. Kinesiology, Northeastern State University

Oklahoma Research Day Abstracts

No abstract provided.

15. Pharmacy, Northeastern State University

Oklahoma Research Day Abstracts

No abstract provided.

19. Zoology, Northeastern State University

Oklahoma Research Day Abstracts

No abstract provided.

Evaluation Of The Signature Molecular Descriptor With Blosum62 And An All-Atom Description For Use In Sequence Alignment Of Proteins, Lindsay M. Aichinger

Williams Honors College, Honors Research Projects

This Honors Project focused on a few aspects of this topic. The second is comparing the molecular signature kernels to three of the BLOSUM matrices (30, 62, and 90) to test the accuracy of the mathematical model. The kernel matrix was manipulated in order to improve the relationship by focusing on side groups and also by changing how the structure was represented in the matrix by increasing the initial height distance from the central atom (Height 1 and Height 2 included).

There were multiple design constraints for this project. The first was the comparison with the BLOSUM matrices (30, 62, …