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Full-Text Articles in Physical Sciences and Mathematics

The Impact Of Host Rock Geochemistry On Bacterial Community Structure In Oligotrophic Cave Environments, Hazel Barton, Nicholas Taylor, Michael Kreate, Austin Springer, Stuart Oehrle, Janet Bertog May 2014

The Impact Of Host Rock Geochemistry On Bacterial Community Structure In Oligotrophic Cave Environments, Hazel Barton, Nicholas Taylor, Michael Kreate, Austin Springer, Stuart Oehrle, Janet Bertog

Hazel Barton

Despite extremely starved conditions, caves contain surprisingly diverse microbial communities. Our research is geared toward understanding what ecosystems drivers are responsible for this high diversity. To asses the effect of rock fabric and mineralogy, we carried out a comparative geomicrobiology study within Carlsbad Cavern, New Mexico, USA. Samples were collected from two different geologic locations within the cave: WF1 in the Massive Member of the Capitan Formation and sF88 in the calcareous siltstones of the Yates Formation. We examined the organic content at each location using liquid chromatography mass spectroscopy and analyzed microbial community structure using molecular phylogenetic analyses. In …


Fish Species Introductions Provide Novel Insights Into The Patterns And Drivers Of Phylogenetic Structure In Freshwaters, Angela L. Strecker, Julian D. Olden Jan 2014

Fish Species Introductions Provide Novel Insights Into The Patterns And Drivers Of Phylogenetic Structure In Freshwaters, Angela L. Strecker, Julian D. Olden

Environmental Science and Management Faculty Publications and Presentations

Despite long-standing interest of terrestrial ecologists, freshwater ecosystems are a fertile, yet unappreciated, testing ground for applying community phylogenetics to uncover mechanisms of species assembly. We quantify phylogenetic clustering and overdispersion of native and non-native fishes of a large river basin in the American Southwest to test for the mechanisms (environmental filtering versus competitive exclusion) and spatial scales influencing community structure. Contrary to expectations, non-native species were phylogenetically clustered and related to natural environmental conditions, whereas native species were not phylogenetically structured, likely reflecting human-related changes to the basin. The species that are most invasive (in terms of ecological impacts) …


Phylogenetics, Population Genetics, And Evolution Of The Mallard Complex, Philip Lavretsky Jan 2014

Phylogenetics, Population Genetics, And Evolution Of The Mallard Complex, Philip Lavretsky

Browse all Theses and Dissertations

Speciation is primarily regarded as an ancestral split that results in two distinct taxonomic units, and proceeds in stages along a continuum from initiation (i.e., population divergence) to completion (i.e., reproductively isolated species). Establishing how and why populations diverge, including the primary mechanisms influencing these events is a major objective for evolutionary scientists. Focusing on incipient forms, researchers attempt to disentangle the antagonistic nature of selection, genetic drift, and gene flow in the speciation process.

In chapter 1, I investigate the phylogenetic relationships of 14 closely related taxa within the mallard complex (Anas spp.) that underwent a radiation within the …