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Full-Text Articles in Physical Sciences and Mathematics

Investigation Of Low-Stress Silicon Nitride As A Replacement Material For Beryllium X-Ray Windows, David B. Brough Dec 2012

Investigation Of Low-Stress Silicon Nitride As A Replacement Material For Beryllium X-Ray Windows, David B. Brough

Theses and Dissertations

The material properties of low stress silicon nitride make it a possible replacement material for beryllium in X-ray windows. In this study, X-ray windows made of LPCVD deposited low stress silicon nitride are fabricated and characterized. The Young's modulus of the LPCVD low stress silicon nitride are characterized and found to be 226±23 GPa. The residual stress is characterized using two different methods and is found to be 127±25 MPa and 141±0.28 MPa. Two support structure geometries for the low stress silicon nitride X-ray windows are used. X-ray windows with thicknesses of 100 nm and 200 nm are suspended on …


Thin Films Of Carbon Nanotubes And Nanotube/Polymer Composites, Anthony D. Willey Dec 2012

Thin Films Of Carbon Nanotubes And Nanotube/Polymer Composites, Anthony D. Willey

Theses and Dissertations

A method is described for ultrasonically spraying thin films of carbon nanotubes that have been suspended in organic solvents. Nanotubes were sonicated in N-Methyl-2-pyrrolidone or N-Cyclohexyl-2-pyrrolidone and then sprayed onto a heated substrate using an ultrasonic spray nozzle. The solvent quickly evaporated, leaving a thin film of randomly oriented nanotubes. Film thickness was controlled by the spray time and ranged between 200-500 nm, with RMS roughness of about 40 nm. Also described is a method for creating thin (300 nm) conductive freestanding nanotube/polymer composite films by infiltrating sprayed nanotube films with polyimide.


Comparing Theory And Experiment For Analyte Transport In The First Vacuum Stage Of The Inductively Coupled Plasma Mass Spectrometer, Matthew R. Zachreson Dec 2012

Comparing Theory And Experiment For Analyte Transport In The First Vacuum Stage Of The Inductively Coupled Plasma Mass Spectrometer, Matthew R. Zachreson

Theses and Dissertations

The Direct Simulation Monte Carlo algorithm as coded in FENIX is used to model the transport of trace ions in the first vacuum stage of the inductively coupled plasma mass spectrometer. Haibin Ma of the Farnsworth group at Brigham Young University measured two radial trace density profiles: one 0.7 mm upstream of the sampling cone and the other 10 mm downstream. We compare simulation results from FENIX with the experimental results. We find that gas dynamic convection and diffusion are unable to account for the experimentally-measured profile changes from upstream to downstream. Including discharge quenching and ambipolar electric fields, however, …


Modeling Radial Bernstein Modes In A Finite-Length Axisymmetric Non-Neutral Plasma, Mark Andrew Hutchison Dec 2012

Modeling Radial Bernstein Modes In A Finite-Length Axisymmetric Non-Neutral Plasma, Mark Andrew Hutchison

Theses and Dissertations

Axisymmetric radial Bernstein modes are known to exist in non-neutral plasmas and have been studied theoretically and computationally in 1D, but detection of these modes has still proven to be difficult due to self-shielding. To help advance the work on this front we created a 2D particle-in-cell (PIC) code that simulates a non-neutral plasma in a Malmberg-Penning trap. A detailed description of the PIC code itself has been included that highlights the benefits of using an $r^2$--$z$ grid and how it can be tested. The focus of the PIC simulation was to discover how best to drive and detect these …


Advanced Numerical Methods In General Relativistic Magnetohydrodynamics, Michael J. Besselman Dec 2012

Advanced Numerical Methods In General Relativistic Magnetohydrodynamics, Michael J. Besselman

Theses and Dissertations

We show our work to refine the process of evolutions in general relativistic magnetohydrodynamics. We investigate several areas in order to improve the overall accuracy of our results. We test several versions of conversion methodologies between different sets of variables. We compare both single equation and two equations solvers to do the conversion. We find no significant improvement for multiple equation conversion solvers when compared to single equation solvers. We also investigate the construction of initial data and the conversion of coordinate systems between initial data code and evolution code. In addition to the conversion work, we have improved some …


Website Adaptive Navigation Effects On User Experiences, James C. Speirs Dec 2012

Website Adaptive Navigation Effects On User Experiences, James C. Speirs

Theses and Dissertations

The information search process within a website can often be frustrating and confusing for website visitors. Navigational structures are often complex and multitiered, hiding links with several layers of navigation that user's might be interested in. Poor navigation causes user frustration. Adaptive navigation can be used to improve the user's navigational experience by flattening the navigational structure and reducing the number of accessible links to only those that the user would be interested in. This examines the effects on a user's navigational experience, of using adaptive navigation as the main navigational structure on a website. This study measured these effects …


Researching Effective Methods For Teaching The Phases Of The Moon, Heather Patti Jones Dec 2012

Researching Effective Methods For Teaching The Phases Of The Moon, Heather Patti Jones

Theses and Dissertations

This study investigated the effectiveness of commonly used instructional methods for teaching the phases of the Moon to fifth and sixth grade students. The instructional methods investigated were the use of diagrams, animations, and models. The effectiveness of each method was tested by measuring students' understanding of Moon phases with a pre and post-assessment after receiving instruction with a specific method or combination of methods. These methods were then evaluated for their ability to help students learn essential concepts, reinforce relevant vocabulary and discourage misconceptions. Results showed that students had better scores with less prevalence of misconception when they were …


Microfluidic Devices With Integrated Sample Preparation For Improved Analysis Of Protein Biomarkers, Pamela Nsang Nge Dec 2012

Microfluidic Devices With Integrated Sample Preparation For Improved Analysis Of Protein Biomarkers, Pamela Nsang Nge

Theses and Dissertations

Biomarkers present a non-invasive means of detecting cancer because they can be obtained from body fluids. They can also be used for prognosis and assessing response to treatment. To limit interferences it is essential to pretreat biological samples before analysis. Sample preparation methods include extraction of analyte from an unsuitable matrix, purification, concentration or dilution and labeling. The many advantages offered by microfluidics include portability, speed, automation and integration. Because of the difficulties encountered in integrating this step in microfluidic devices most sample preparation methods are often carried out off-chip. In the fabrication of micro-total analysis systems it is important …


Necessary And Sufficient Informativity Conditions For Robust Network Reconstruction Using Dynamical Structure Functions, Vasu Nephi Chetty Dec 2012

Necessary And Sufficient Informativity Conditions For Robust Network Reconstruction Using Dynamical Structure Functions, Vasu Nephi Chetty

Theses and Dissertations

Dynamical structure functions were developed as a partial structure representation of linear time-invariant systems to be used in the reconstruction of biological networks. Dynamical structure functions contain more information about structure than a system's transfer function, while requiring less a priori information for reconstruction than the complete computational structure associated with the state space realization. Early sufficient conditions for network reconstruction with dynamical structure functions severely restricted the possible applications of the reconstruction process to networks where each input independently controls a measured state. The first contribution of this thesis is to extend the previously established sufficient conditions to incorporate …


Data Acquisition From Cemetery Headstones, Cameron Smith Christiansen Nov 2012

Data Acquisition From Cemetery Headstones, Cameron Smith Christiansen

Theses and Dissertations

Data extraction from engraved text is discussed rarely, and nothing in the open literature discusses data extraction from cemetery headstones. Headstone images present unique challenges such as engraved or embossed characters (causing inner-character shadows), low contrast with the background, and significant noise due to inconsistent stone texture and weathering. Current systems for extracting text from outdoor environments (billboards, signs, etc.) make assumptions (i.e. clean and/or consistently-textured background and text) that fail when applied to the domain of engraved text. Additionally, the ability to extract the data found on headstones is of great historical value. This thesis describes a novel and …


Microfabrication, Characterization, And Application Of Carbon Nanotube Templated Thin Layer Chromatography Plates, And Functionalization Of Porous Graphitic Carbon, David S. Jensen Nov 2012

Microfabrication, Characterization, And Application Of Carbon Nanotube Templated Thin Layer Chromatography Plates, And Functionalization Of Porous Graphitic Carbon, David S. Jensen

Theses and Dissertations

This dissertation contains the following sections. Chapter 1 contains a detailed description of the theory of thin layer chromatography (TLC). Chapter 2 describes the benefits and practical considerations of elevated temperatures in liquid chromatography (LC). The porous graphitic carbon (PGC) I modified as part of my work is often used in elevated temperature LC. Chapter 3 shows a thermodynamic analysis of chromatographic retention at elevated temperature, and Chapter 4 contains a closer look at the van 't Hoff equation in LC and how it can be used in retention modeling. In Chapter 5, I describe a new procedure for microfabricating …


Algorithmically Flexible Style Composition Through Multi-Objective Fitness Functions, Skyler James Murray Nov 2012

Algorithmically Flexible Style Composition Through Multi-Objective Fitness Functions, Skyler James Murray

Theses and Dissertations

Creating a fitness function for music is largely subjective and dependent on a programmer's personal tastes or goals. Previous attempts to create musical fitness functions for use in genetic algorithms lack scope or are prejudiced to a certain genre of music. They also suffer the limitation of producing music only in the strict style determined by the programmer. We show in this paper that musical feature extractors that avoid the challenges of qualitative judgment enable creation of a multi-objective function for direct music production. Multi-objective fitness functions enable creation of music with varying identifiable styles. With this system we produced …


A Cps-Like Transformation Of Continuation Marks, Kimball Richard Germane Nov 2012

A Cps-Like Transformation Of Continuation Marks, Kimball Richard Germane

Theses and Dissertations

Continuation marks are a programming language feature which generalize stack inspection. Despite its usefulness, this feature has not been adopted by languages which rely on stack inspection, e.g., for dynamic security checks. One reason for this neglect may be that continuation marks do not yet enjoy a transformation to the plain λ-calculus which would allow higher-order languages to provide continuation marks at little cost. We present a CPS-like transformation from the call-by-value λ-calculus augmented with continuation marks to the pure call-by-value λ-calculus. We discuss how this transformation simplifies the construction of compilers which treat continuation marks correctly. We document an …


Deposition And Characterization Of Hydrophobic Coatings, Vipul Gupta Nov 2012

Deposition And Characterization Of Hydrophobic Coatings, Vipul Gupta

Theses and Dissertations

Hydrophobic coatings find application in various sectors of the economy including to electronics, textiles, optical devices, and in scientific and commercial equipment. These different applications demand that different hydrophobic coatings posses a range of properties that may include smoothness or roughness, thicknesses on the order of a monolayer or a micron, robustness or the ability to dissolve quickly, transparency or opacity, water resistance or water permeability, electrical conductivity, oleophobicity, etc. However, whatever the final/desired properties, deposition via dry-deposition processes offers significant advantages, including greater reproducibility, increased environmental friendliness, and cost effectiveness on an industrial scale. Herein I explore the chemical …


Bayesian Test Analytics For Document Collections, Daniel David Walker Nov 2012

Bayesian Test Analytics For Document Collections, Daniel David Walker

Theses and Dissertations

Modern document collections are too large to annotate and curate manually. As increasingly large amounts of data become available, historians, librarians and other scholars increasingly need to rely on automated systems to efficiently and accurately analyze the contents of their collections and to find new and interesting patterns therein. Modern techniques in Bayesian text analytics are becoming wide spread and have the potential to revolutionize the way that research is conducted. Much work has been done in the document modeling community towards this end,though most of it is focused on modern, relatively clean text data. We present research for improved …


Javalite - An Operational Semantics For Modeling Java Programs, Saint Oming'o Wesonga Nov 2012

Javalite - An Operational Semantics For Modeling Java Programs, Saint Oming'o Wesonga

Theses and Dissertations

Java is currently a widely used programming language. However, there is no formal definition of Java's semantics. Consequently, Java code does not have a universal meaning. This work discusses recent attempts to formalize Java and presents a new formalism of Java called Javalite. In contrast to common approaches to formalization, Javalite is purely syntactic in its definition. Syntactic operational semantics use the structure of the language to define its behavior. Javalite models most Java features with notable exceptions being threads, reflection, and interfaces. This work presents an executable semi-formal model of Javalite in PLT Redex. Being executable means that Javalite …


Mechanism Of Action Studies On A New Class Of Anticancer Nucleosides, Megan E. Browning Nov 2012

Mechanism Of Action Studies On A New Class Of Anticancer Nucleosides, Megan E. Browning

Theses and Dissertations

We have completed mechanism of action studies on a new class of anticancer nucleosides typified by a novel nucleoside discovered in our lab, MAP-870. In order to study the mechanism of MAP-870, several experiments were completed on a colorectal adenocarcinoma cell line, HT-29, including trypan blue cell count, sulforhodamine B assays, flow cytometry of cell cycle, propidium iodide incorporation, and phosphatidylserine externalization, Caspase-Glo3/7 assays, DNA fragmentation gel, cyclophilin A release gel, PAMPA, and confocal imaging. Sulforhodamine B assays show that MAP-870 does indeed cause growth inhibition and cell death in the model tested. PAMPA assays show that MAP-870 does not …


Insights Into The Early Transgressive History Of Lake Bonneville From Stratigraphic Investigation Of Pilot Valley Playa, Ut/Nv, Usa, Kevin A. Rey Oct 2012

Insights Into The Early Transgressive History Of Lake Bonneville From Stratigraphic Investigation Of Pilot Valley Playa, Ut/Nv, Usa, Kevin A. Rey

Theses and Dissertations

Multiple shallow sediment cores were obtained from Pilot Valley playa, a sub-basin located in the northwestern Bonneville basin. Analysis of stratigraphy, ostracodes, mineralogy, chemistry, total inorganic carbon (TIC), total organic carbon (TOC), and stable isotopes were performed to better place these sediments into proper context with respect to the Lake Bonneville cycle. Results showed Pilot Valley playa contains a nearly full sequence of Lake Bonneville deep-water marl in addition to sediments deposited before and after the Lake Bonneville cycle. Within the marl is a sequence of organic rich algal laminated marl correlated with the Stansbury oscillation. Four 14C ages ranging …


The Role Of Case-Hardening In The Development And Preservation Of Narrow, Vertical-Walled Canyons In Adršpach-Teplice, Czech Republic, Shawn Austin Wiggins Oct 2012

The Role Of Case-Hardening In The Development And Preservation Of Narrow, Vertical-Walled Canyons In Adršpach-Teplice, Czech Republic, Shawn Austin Wiggins

Theses and Dissertations

The geomorphology at Adršpach-Teplice, Czech Republic is dominated by vertical-walled, fracture-controlled features including slot canyons, gorges and pillars. Surfaces of canyon walls in Adršpach are case-hardened and more resistant to erosion than the bulk of the sandstone, which appears to be fundamental to the formation and preservation of canyons. Core and whole rock samples from Adršpach-Teplice were analyzed in thin section, including SEM analysis with cathodo luminescence. XRF and XRD analyses indicated that silica case-hardened surfaces are chemically and mineralogically similar to the rock interior, while iron case-hardened surfaces have an increase in iron present at the surface as the …


Motion Capture Of Character Interactions With A Rope, Bryce Zachary Porter Oct 2012

Motion Capture Of Character Interactions With A Rope, Bryce Zachary Porter

Theses and Dissertations

We present a solution to animating interactions between characters and thin, non-rigid bodies using a passive optical motion capture system. Prior work in human body motion capture can accurately recreate human motion but this work is not adequate because it does not allow for interactions with a non-rigid body. Prior work in face and cloth motion capture handles non-rigid planes but rope is better handled with a curved spline rather than a curved plane. The segmented motion is in the form of un-indexed motion capture data. After segmenting the motion of the thin, non-rigid body and the human character the …


Discriminant Analysis Of Xrf Data From Sandstones Of Like Facies And Appearance: A Method For Identifying A Regional Unconformity, Paleotopography,And Diagenetic Histories, Stephen Paul Phillips Sep 2012

Discriminant Analysis Of Xrf Data From Sandstones Of Like Facies And Appearance: A Method For Identifying A Regional Unconformity, Paleotopography,And Diagenetic Histories, Stephen Paul Phillips

Theses and Dissertations

The placement of an unconformable surface within a stratal succession affects the interpreted thickness of units and sequences in contact with that surface. Unit thickness influences the interpretation of basin subsidence, paleotopography, diagenesis, and depositional style. Accurate placement of an unconformity results in true formational thicknesses for formations associated with that unconformity. True thicknesses aid in producing more precise surface to subsurface correlations, isopach maps, and paleogeographic maps. An unconformity may be difficult to identify in the stratal succession due to similar rocks above and below the unconformity and the presence of multiple candidate surfaces. Using statistical discriminant analysis of …


Secure Browser-Based Instant Messaging, Christopher Douglas Robison Sep 2012

Secure Browser-Based Instant Messaging, Christopher Douglas Robison

Theses and Dissertations

Instant messaging is a popular form of communication over the Internet. Statistics show that instant messaging has overtaken email in popularity. Traditionally, instant messaging has consisted of a desktop client communicating with other clients via an instant messaging service provider. However, instant messaging solutions are starting to become available in the web browser–services like Google Talk, Live Messenger and Facebook. Despite the work done by researchers to secure instant messaging networks, little work has been done to secure instant messaging in the browser. We present secure browser-based instant messaging overlays as a means to enable convenient, secure communication in existing …


Automatic Content-Based Temporal Alignment Of Image Sequences With Varying Spatio-Temporal Resolution, Samuel R. Ogden Sep 2012

Automatic Content-Based Temporal Alignment Of Image Sequences With Varying Spatio-Temporal Resolution, Samuel R. Ogden

Theses and Dissertations

Many applications use multiple cameras to simultaneously capture imagery of a scene from different vantage points on a rigid, moving camera system over time. Multiple cameras often provide unique viewing angles but also additional levels of detail of a scene at different spatio-temporal resolutions. However, in order to benefit from this added information the sources must be temporally aligned. As a result of cost and physical limitations it is often impractical to synchronize these sources via an external clock device. Most methods attempt synchronization through the recovery of a constant scale factor and offset with respect to time. This limits …


Nanoscale Surface Patterning And Applications: Using Top-Down Patterning Methods To Aid Bottom-Up Fabrication, Anthony Craig Pearson Aug 2012

Nanoscale Surface Patterning And Applications: Using Top-Down Patterning Methods To Aid Bottom-Up Fabrication, Anthony Craig Pearson

Theses and Dissertations

Bottom-up self-assembly can be used to create structures with sub-20 nm feature sizes or materials with advanced electrical properties. Here I demonstrate processes to enable such self-assembling systems including block copolymers and DNA origami, to be integrated into nanoelectronic devices. Additionally, I present a method which utilizes the high stability and electrical conductivity of graphene, which is a material formed using a bottom-up growth process, to create archival data storage devices. Specifically, I show a technique using block copolymer micelle lithography to fabricate arrays of 5 nm gold nanoparticles, which are chemically modified with a single-stranded DNA molecule and used …


Automatic Generation Of Music For Inducing Emotive And Physiological Responses, Kristine Perry Monteith Aug 2012

Automatic Generation Of Music For Inducing Emotive And Physiological Responses, Kristine Perry Monteith

Theses and Dissertations

Music and emotion are two realms traditionally considered to be unique to human intelligence. This dissertation focuses on furthering artificial intelligence research, specifically in the area of computational creativity, by investigating methods of composing music that elicits desired emotional and physiological responses. It includes the following: an algorithm for generating original musical selections that effectively elicit targeted emotional and physiological responses; a description of some of the musical features that contribute to the conveyance of a given emotion or the elicitation of a given physiological response; and an account of how this algorithm can be used effectively in two different …


Curious Growth Of A Buried Sio2 Layer, Thomas O. Mcconkie Aug 2012

Curious Growth Of A Buried Sio2 Layer, Thomas O. Mcconkie

Theses and Dissertations

Initial investigation of Moxtek wire grid polarizers composed of Al and coated with SiO2 - SiX - SiO2 (where SiX is used to indicate a Si rich layer whose complete composition is not to be disclosed for proprietary reasons) showed a growth of 3x in the inner (closest to Al) SiO2 layer after baking. Upon removing the X and varying rib composition and layering composition and geometries in 12 sets of before and after samples, no obvious growth was observed. Even baking the original unbaked sample yielded no growth. Our data suggest that the initial conclusion of buried oxide growth …


A Confidence-Prioritization Approach To Data Processing In Noisy Data Sets And Resulting Estimation Models For Predicting Streamflow Diel Signals In The Pacific Northwest, Nathaniel Lee Gustafson Aug 2012

A Confidence-Prioritization Approach To Data Processing In Noisy Data Sets And Resulting Estimation Models For Predicting Streamflow Diel Signals In The Pacific Northwest, Nathaniel Lee Gustafson

Theses and Dissertations

Streams in small watersheds are often known to exhibit diel fluctuations, in which streamflow oscillates on a 24-hour cycle. Streamflow diel fluctuations, which we investigate in this study, are an informative indicator of environmental processes. However, in Environmental Data sets, as well as many others, there is a range of noise associated with individual data points. Some points are extracted under relatively clear and defined conditions, while others may include a range of known or unknown confounding factors, which may decrease those points' validity. These points may or may not remain useful for training, depending on how much uncertainty they …


Gas Phase Characterization Of Supramolecules Using Cross-Sectional Areas By Fticr And Sustained Off-Resonance Irradiation Collision Induced Dissociation Techniques In A Fourier Transform Ion Cyclotron Resonance Mass Spectrometer, Fan Yang Aug 2012

Gas Phase Characterization Of Supramolecules Using Cross-Sectional Areas By Fticr And Sustained Off-Resonance Irradiation Collision Induced Dissociation Techniques In A Fourier Transform Ion Cyclotron Resonance Mass Spectrometer, Fan Yang

Theses and Dissertations

In my dissertation, I use a Fourier Transform Ion Cyclotron Resonance Mass Spectrometer (FTICR-MS) to investigate supramolecules. Cross-sectional areas by Fourier transform ICR (CRAFTI), a novel technique for measurements of collision cross sections by FTICR, is demonstrated for the first time. The CRAFTI method measures the total "dephasing cross section" for removal of the ions from the coherent packet in the FTICR cell, including contributions not only from momentum transfer but also from reactive collisions including those leading to collisional dissociation. Experimental CRAFTI collision cross sections correlate linearly with theoretically computed results and with results obtained using ion mobility measurements. …


Multiple Recoding Mechanisms Produce Cyclooxygenase And Cyclooxygenase-Related Proteins From Frameshift-Containing Cox-3/Cox-1b Transcripts In Rat And Human, John Cameron Hunter Aug 2012

Multiple Recoding Mechanisms Produce Cyclooxygenase And Cyclooxygenase-Related Proteins From Frameshift-Containing Cox-3/Cox-1b Transcripts In Rat And Human, John Cameron Hunter

Theses and Dissertations

To increase diversity of enzymes and proteins, cells mix and match exonic and intronic regions retained in mature mRNAs by alternative splicing. An estimated 94% of all multi-exon genes express one or more alternatively spliced transcripts generating proteins with similar or modified functions. Cyclooxygenase is a signaling enzyme that catalyzes the rate-limiting step in the synthesis of diverse bioactive lipids termed prostaglandins. Prostaglandins are involved in myriad physiological and pathopysiological processes including vasoregulation, stomach mucosal maintenance, parturition, pain, fever, inflammation, neoplasia and angiogenesis and are inhibited by aspirin-like drugs known as NSAIDs. In 2002 an alternatively spliced, intron-1 retaining variant …


Flow Valve Diagnostics For Label-Free, Quantitative Biomarker Detection: Device Fabrication, Surface Modification, And Testing, Danielle Scarlet Mansfield Aug 2012

Flow Valve Diagnostics For Label-Free, Quantitative Biomarker Detection: Device Fabrication, Surface Modification, And Testing, Danielle Scarlet Mansfield

Theses and Dissertations

Diseases are often diagnosed by detection of disease-specific biomarkers in fluid samples. However, many state-of-the-art detection methods require a lab with complex machinery, trained operators, and/or lengthy analysis time. In contrast, point-of-care (POC) devices are brought to the patient's location, they are easy to use, and results are obtained almost immediately. Many current POC devices are too difficult to be used without a skilled assistant, and although many are able to detect analytes above a threshold value, they give little or no quantitative information. This work presents the development of polymer-based microfluidic devices capable of sensing and quantifying biomarkers in …