Open Access. Powered by Scholars. Published by Universities.®

Physical Sciences and Mathematics Commons

Open Access. Powered by Scholars. Published by Universities.®

Articles 1 - 3 of 3

Full-Text Articles in Physical Sciences and Mathematics

Machine Learning And Graph Theory Approaches For Classification And Prediction Of Protein Structure, Gulsah Altun Apr 2008

Machine Learning And Graph Theory Approaches For Classification And Prediction Of Protein Structure, Gulsah Altun

Computer Science Dissertations

Recently, many methods have been proposed for the classification and prediction problems in bioinformatics. One of these problems is the protein structure prediction. Machine learning approaches and new algorithms have been proposed to solve this problem. Among the machine learning approaches, Support Vector Machines (SVM) have attracted a lot of attention due to their high prediction accuracy. Since protein data consists of sequence and structural information, another most widely used approach for modeling this structured data is to use graphs. In computer science, graph theory has been widely studied; however it has only been recently applied to bioinformatics. In this …


K-Means+Id3 And Dependence Tree Methods For Supervised Anomaly Detection, Kiran S. Balagani Apr 2008

K-Means+Id3 And Dependence Tree Methods For Supervised Anomaly Detection, Kiran S. Balagani

Doctoral Dissertations

In this dissertation, we present two novel methods for supervised anomaly detection. The first method "K-Means+ID3" performs supervised anomaly detection by partitioning the training data instances into k clusters using Euclidean distance similarity. Then, on each cluster representing a density region of normal or anomaly instances, an ID3 decision tree is built. The ID3 decision tree on each cluster refines the decision boundaries by learning the subgroups within a cluster. To obtain a final decision on detection, the k-Means and ID3 decision trees are combined using two rules: (1) the nearest neighbor rule; and (2) the nearest consensus rule. The …


Vegetation Identification Based On Satellite Imagery, Vamsi K.R. Mantena, Ramu Pedada, Srinivas Jakkula, Yuzhong Shen, Jiang Li, Hamid R. Arabnia (Ed.) Jan 2008

Vegetation Identification Based On Satellite Imagery, Vamsi K.R. Mantena, Ramu Pedada, Srinivas Jakkula, Yuzhong Shen, Jiang Li, Hamid R. Arabnia (Ed.)

Electrical & Computer Engineering Faculty Publications

Automatic vegetation identification plays an important role in many applications including remote sensing and high performance flight simulations. This paper presents a method to automatically identify vegetation based upon satellite imagery. First, we utilize the ISODATA algorithm to cluster pixels in the images where the number of clusters is determined by the algorithm. We then apply morphological operations to the clustered images to smooth the boundaries between clusters and to fill holes inside clusters. After that, we compute six features for each cluster. These six features then go through a feature selection algorithm and three of them are determined to …