Open Access. Powered by Scholars. Published by Universities.®
Physical Sciences and Mathematics Commons™
Open Access. Powered by Scholars. Published by Universities.®
- Discipline
- Institution
Articles 1 - 6 of 6
Full-Text Articles in Physical Sciences and Mathematics
Exploration Of Nucleic Acid Hydrogran Bonding Using Molecular Mechanics And Dft Calculations, Simi Kaur
Exploration Of Nucleic Acid Hydrogran Bonding Using Molecular Mechanics And Dft Calculations, Simi Kaur
Biological Sciences
Many recent theoretical and experimental techniques have been developed to probe the structurefunction relationships of complex biomolecules. The roles of RNAs are dependent upon various intricate structural motifs and interactions, including hairpins, pseudoknots, long range territory contacts, bulges and internal loops, that are not easily captured by these methods. We had previously developed an enhanced replica exchange molecular dynamics method that incorporated secondary structure information in the form of distance restraints in order to effectively overcome kinetic barriers and sample conformational space. In several structures, restrained RNA base pairs near large bulges displayed a preference for stacking over hydrogen bonding …
Computational Design And Analysis Of Molecular Ethylene Oligomerization Catalysts, Doo Hyun Kwon
Computational Design And Analysis Of Molecular Ethylene Oligomerization Catalysts, Doo Hyun Kwon
Theses and Dissertations
Linear alpha olefins (LAOs) are key petrochemical precursors for the synthesis of larger polymers, detergents, plasticizers, and lubricants. Most catalytic ethylene oligomerization processes generate a wide distribution of LAO carbon chain lengths. A major ongoing industrial challenge is to develop homogeneous catalysts that result in selective and tunable ethylene oligomerization to 1-hexene and 1-octene alkenes. Quantum mechanical calculations coupled with rapidly advancing technology have enabled the ability to calculate small molecule systems with high accuracy. Employing computational models to advance from empirical to quantitative prediction of product selectivities has become an active area of exploration. In this work, we demonstrate …
Computational Studies On Perovskite-Metallofullerene Interface And Magnetic Properties Of Mn-Based Mixed Olivines, Bethuel Omutiti Khamala
Computational Studies On Perovskite-Metallofullerene Interface And Magnetic Properties Of Mn-Based Mixed Olivines, Bethuel Omutiti Khamala
Open Access Theses & Dissertations
Methyl ammonium lead halide (MAPbX3) perovskite based solar cells have recently emerged as promising class of materials for photovoltaic applications with efficiencies reaching over 22%. Designing interfaces with strong binding is vital to developing efficient, high-performing solar cells. Fullerene-based materials are widely employed as efficient electron acceptors and can serve as electron transporting layer in perovskite based solar cells. We have studied interfaces of methyl ammonium lead iodide MAPbI3 with Sc3N@C80 fullerene and Sc3N@C80PCBM fullerene derivate within the density functional formalism. Different surface terminations and orientations of the methyl ammonium are examined for binding of the fullerene layer. Our calculated …
Electron Binding Energy Of Polar Molecules Using Fermi Löwdin Orbital Self Interaction Corrected Density Functional Scheme, Peter Obinna Ufondu
Electron Binding Energy Of Polar Molecules Using Fermi Löwdin Orbital Self Interaction Corrected Density Functional Scheme, Peter Obinna Ufondu
Open Access Theses & Dissertations
Density functional theory (DFT) has become a standard method for electronic structure calculations in physics. The standard approximate density functional usually do not bind this class of anions, due to self-interaction error (SIE). We apply the recently developed Fermi Löwdin orbitals based self-interaction correction method (FLOSIC) with long-range diffuse Gaussian functions to study dipole bound anions and negatively charged water clusters. These calculations are carried out using Perdew-Wang (1992) local spin density PW91-LDA, Perdew-Burke-Ernzerhof PBE-GGA, and the recently developed Strongly Constrained and Appropriately Normed SCAN-meta-GGA functional which satisfies all the known constraints for exchange-correlation functional. Plot from FLOSIC density difference …
Study Of D-Electron Systems With Fermi-Lowdin Orbital Self-Interaction Correction, Prakash Mishra
Study Of D-Electron Systems With Fermi-Lowdin Orbital Self-Interaction Correction, Prakash Mishra
Open Access Theses & Dissertations
Density Functional Theory (DFT) is one of the very popular and versatile methods for calculations to study electronic structure, and the accuracy of DFT depends on the approximation used in the exchange-correlation functional. One of the known problems with the approximation is that the widely used density functional approximations (DFA) suffer self-interaction errors. Systems with d-electrons such as transition metal oxides often show deviation of DFT predicted behavior from experimental result. SIE tends to unphysically lower the energies of fractionally occupied state which leads to deviation from piece-wise linear behavior of total energy between two integer occupations. This leads to …
Electronic And Geometric Structure Of Alnom And Alnom +, Albert R. Armstrong
Electronic And Geometric Structure Of Alnom And Alnom +, Albert R. Armstrong
Theses and Dissertations
Generally, the electronic stability of aluminum clusters is associated with either closed electronic shells of delocalized electrons, or aluminum in the +3 state. To explore alternative routes for electronic stability in aluminum oxide clusters, theoretical methods were used to examine the geometric and electronic structure of AlnOm (2≤n≤7; 1≤m≤10) clusters. Two types of electronically stable clusters with large HOMO-LUMO gaps were identified the first being Al2nO3m clusters with a +3 oxidation state on the aluminum, and the second being planar clusters such as Al4O4, Al5O3, Al …