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Full-Text Articles in Physical Sciences and Mathematics

Deterministic Global 3d Fractal Cloud Model For Synthetic Scene Generation, Aaron M. Schinder, Shannon R. Young, Bryan J. Steward, Michael L. Dexter, Andrew Kondrath, Stephen Hinton, Ricardo Davila May 2024

Deterministic Global 3d Fractal Cloud Model For Synthetic Scene Generation, Aaron M. Schinder, Shannon R. Young, Bryan J. Steward, Michael L. Dexter, Andrew Kondrath, Stephen Hinton, Ricardo Davila

Faculty Publications

This paper describes the creation of a fast, deterministic, 3D fractal cloud renderer for the AFIT Sensor and Scene Emulation Tool (ASSET). The renderer generates 3D clouds by ray marching through a volume and sampling the level-set of a fractal function. The fractal function is distorted by a displacement map, which is generated using horizontal wind data from a Global Forecast System (GFS) weather file. The vertical windspeed and relative humidity are used to mask the creation of clouds to match realistic large-scale weather patterns over the Earth. Small-scale detail is provided by the fractal functions which are tuned to …


Extending Active Network Length Versus Catchment Discharge Relations To Temporarily Dry Outlets, Gianluca Botter, James Mcnamara, Nicola Durighetto Jan 2024

Extending Active Network Length Versus Catchment Discharge Relations To Temporarily Dry Outlets, Gianluca Botter, James Mcnamara, Nicola Durighetto

Geosciences Faculty Publications and Presentations

River networks are not steady blue lines drawn in a map, since they continuously change their shape and extent in response to climatic drivers. Therefore, the flowing length of rivers (L) and the corresponding catchment-scale streamflow (Qsur) co-evolve dynamically. This paper analyzes the relationship between the wet channel length and the streamflow of a river basin, formulating a general analytical model that includes the case of temporarily dry outlets. In particular, the framework relaxes the common assumption that when the discharge at the outlet tends to zero the upstream flowing length approaches zero. Different analytical …


Bridging Biological Systems With Social Behavior, Conservation, Decision Making, And Well-Being Through Hybrid Mathematical Modeling, Maggie Renee Sullens Jan 2024

Bridging Biological Systems With Social Behavior, Conservation, Decision Making, And Well-Being Through Hybrid Mathematical Modeling, Maggie Renee Sullens

Faculty Publications and Other Works -- Mathematics

This dissertation defense presentation highlights the power of hybrid mathematical modeling and addresses crucial issues such as:

1️. The Impact of Industry Collapse on Community Mental Health: A Complex Contagion ODE Model.

2️. Budget Allocation and Illegal Fishing: A Game Theoretic Model.

3️. Reactive Scope Model with an Energy Budget and Multiple Mediators: An ODE Model

The overarching theme of Hybrid Mathematical Modeling beautifully captures the essence of this work, demonstrating its potential to unravel ecological issues while addressing the intricate interactions between humans and the environment.


Habitat Heterogeneity In Nebraska Streams And Distribution Prediction For Tier-1 Cyprinids Using Multi-Scale Modeling Of Fluvial And Landscape Features, Connor P. Hart Dec 2023

Habitat Heterogeneity In Nebraska Streams And Distribution Prediction For Tier-1 Cyprinids Using Multi-Scale Modeling Of Fluvial And Landscape Features, Connor P. Hart

School of Natural Resources: Dissertations, Theses, and Student Research

Multiscale environmental processes determine in-stream habitat conditions which drive species distributions. Habitat constitutes the physical template upon which ecological processes occur and species conduct life stage activities. Habitat heterogeneity promotes biodiversity of aquatic systems. Stream classification informs freshwater conservation by providing a useful framework to account for habitat heterogeneity, often based on landscape regions of similar environmental processes. A greater understanding of landscape-based classification frameworks as means to classify stream systems may improve understanding of drivers of biodiversity. Using Nebraska as a case study, on a statewide scale, objectives were 1) to characterize habitat availability for several at-risk fish species, …


Does Drought Stress Eliminate The Benefit Of Elevated Co2,/Sub> On Soybean Yield? Using An Improved Model To Link Crop And Soil Water Relations, Wenguang Sun, David Fleisher, Dennis Timlin, Chittaranjan Ray, Zhuangji Wang, Sahila Beegum, Vangimalla Reddy Oct 2023

Does Drought Stress Eliminate The Benefit Of Elevated Co2,/Sub> On Soybean Yield? Using An Improved Model To Link Crop And Soil Water Relations, Wenguang Sun, David Fleisher, Dennis Timlin, Chittaranjan Ray, Zhuangji Wang, Sahila Beegum, Vangimalla Reddy

Daugherty Water for Food Global Institute: Faculty Publications

Crop simulation models are indispensable tools that facilitate studies to assess climate impacts and adaptation responses, but have not been adequately tested in terms of accurately predicting crop growth and water stress responses to high carbon dioxide concentrations [CO2]. The soybean model, GLYCIM, previously modified with a coupled leaf-level gas exchange – energy balance model, was integrated with a two-dimensional convectivediffusive root growth module which linked soil and leaf water potentials with the regulation of stomatal conductance. We evaluated the accuracy of this modified GLYCIM using experimental data from a Free-Air CO2 Enrichment (FACE) site, SoyFACE, and …


Assessment Of Bridge Pier Response To Fire, Vehicle Impact, And Air Blast, Chen Fang, Qusai Alomari, Daniel G. Linzell May 2023

Assessment Of Bridge Pier Response To Fire, Vehicle Impact, And Air Blast, Chen Fang, Qusai Alomari, Daniel G. Linzell

Department of Civil and Environmental Engineering: Dissertations, Theses, and Student Research

Highway bridges exposed to intentional or unintentional fire followed by combined vehicle impact and air blast are at risk of significant damage and, possibly, collapse. Limited studies examining the complex effects of these extreme demands on bridge support elements and parametrizing their response and damage are found in the open literature. Research that is presented is part of an ongoing numerical investigation examining round, multi-column, reinforced concrete (RC), bridge pier behavior subject to multi-hazard scenarios involving fire, vehicle impact, and air blast. Detailed nonlinear finite element analysis models of single columns and multi-column piers supported by a pile foundation system …


Mth 125 - Modeling With Exponential Functions, Stivi Manoku Apr 2023

Mth 125 - Modeling With Exponential Functions, Stivi Manoku

Open Educational Resources

The file includes a variety of problems that emphasize the importance of modeling exponential growth and/or radioactive decay. Through different exercises and problems, the assignment goal is to improve their comprehension of exponential functions and hone their problem-solving abilities.


Modeling And Fitting Two-Way Tables Containing Outliers, David L. Farnsworth Feb 2023

Modeling And Fitting Two-Way Tables Containing Outliers, David L. Farnsworth

Articles

A model is proposed for two-way tables of measurement data containing outliers. The two independent variables are categorical and error free. Neither missing values nor replication are present. The model consists of the sum of a customary additive part that can be fit using least squares and a part that is composed of outliers. Recommendations are made for methods for identifying cells containing outliers and for fitting the model. A graph of the observations is used to determine the outliers’ locations. For all cells containing an outlier, replacement values are determined simultaneously using a classical missing-data tool. The result is …


Models For Decision-Making - Second Edition, Steven Cosares, Fred Rispoli Jan 2023

Models For Decision-Making - Second Edition, Steven Cosares, Fred Rispoli

Open Educational Resources

Decision-Making often refers to a multi-stage process that starts with some form of introspection or reflection about a situation in which a person or group of people find themselves. These ruminations usually lead to series of questions that need to be answered, or to a set of data that needs to be collected and analyzed, or to some calculations that need to be performed before someone can be in a position to make informed decisions and take appropriate actions.

We provide some simple examples of Quantitative Models, which are often found in a decision-making situation. We focus on the use …


3d Hydrostratigraphic And Hydraulic Conductivity Modeling Using Supervised Machine Learning, T. A. Tilahun, Jesse T. Korus Dr. Jan 2023

3d Hydrostratigraphic And Hydraulic Conductivity Modeling Using Supervised Machine Learning, T. A. Tilahun, Jesse T. Korus Dr.

Conservation and Survey Division

No abstract provided.


Securing The Transportation Of Tomorrow: Enabling Self-Healing Intelligent Transportation, Elanor Jackson, Sahra Sedigh Sarvestani Jan 2023

Securing The Transportation Of Tomorrow: Enabling Self-Healing Intelligent Transportation, Elanor Jackson, Sahra Sedigh Sarvestani

Electrical and Computer Engineering Faculty Research & Creative Works

The safety of autonomous vehicles relies on dependable and secure infrastructure for intelligent transportation. The doctoral research described in this paper aims to enable self-healing and survivability of the intelligent transportation systems required for autonomous vehicles (AV-ITS). The proposed approach is comprised of four major elements: qualitative and quantitative modeling of the AV-ITS, stochastic analysis to capture and quantify interdependencies, mitigation of disruptions, and validation of efficacy of the self-healing process. This paper describes the overall methodology and presents preliminary results, including an agent-based model for detection of and recovery from disruptions to the AV-ITS.


On The Relative Importance Of Offshelf/Onshelf Drivers Of Variability In Mcdw Inventory On The Amundsen Shelf, Antarctica, Pierre St-Laurent, S. E. Stammerjohn, T. Maksym, R. M. Sherrell Dec 2022

On The Relative Importance Of Offshelf/Onshelf Drivers Of Variability In Mcdw Inventory On The Amundsen Shelf, Antarctica, Pierre St-Laurent, S. E. Stammerjohn, T. Maksym, R. M. Sherrell

Presentations

Ice shelves in the Amundsen Sea (west Antarctica) are melting rapidly and may raise global sea levels substantially over the coming century through reduced buttressing. The high basal melt rates are associated with the presence of warm modified Circumpolar Deep Water (mCDW) that intrudes across the continental shelf and melts the floating portion of the ice sheet from its base near the grounding zone. How much mCDW is present on the continental shelf (its volume inventory) is thus thought to be a key proxy for the year-to-year variability in ice shelf melt rates. Over the past decade, the literature has …


Fluid-Structure Interaction Modelling Of Neighboring Tubes With Primary Cilium Analysis, Nerion Zekaj, Shawn D. Ryan, Andrew Resnick Dec 2022

Fluid-Structure Interaction Modelling Of Neighboring Tubes With Primary Cilium Analysis, Nerion Zekaj, Shawn D. Ryan, Andrew Resnick

Mathematics and Statistics Faculty Publications

We have developed a numerical model of two osculating cylindrical elastic renal tubules to investigate the impact of neighboring tubules on the stress applied to a primary cilium. We hypothesize that the stress at the base of the primary cilium will depend on the mechanical coupling of the tubules due to local constrained motion of the tubule wall. The objective of this work was to determine the in-plane stresses of a primary cilium attached to the inner wall of one renal tubule subject to the applied pulsatile flow, with a neighboring renal tube filled with stagnant fluid in close proximity …


Opportunities And Challenges In Code Search Tools, Chao Liu, Xin Xia, David Lo, Cuiying Gao, Xiaohu Yang, John Grundy Dec 2022

Opportunities And Challenges In Code Search Tools, Chao Liu, Xin Xia, David Lo, Cuiying Gao, Xiaohu Yang, John Grundy

Research Collection School Of Computing and Information Systems

Code search is a core software engineering task. Effective code search tools can help developers substantially improve their software development efficiency and effectiveness. In recent years, many code search studies have leveraged different techniques, such as deep learning and information retrieval approaches, to retrieve expected code from a large-scale codebase. However, there is a lack of a comprehensive comparative summary of existing code search approaches. To understand the research trends in existing code search studies, we systematically reviewed 81 relevant studies. We investigated the publication trends of code search studies, analyzed key components, such as codebase, query, and modeling technique …


Deep Learning For Anomaly Detection, Guansong Pang, Charu Aggarwal, Chunhua Shen, Nicu Sebe Jun 2022

Deep Learning For Anomaly Detection, Guansong Pang, Charu Aggarwal, Chunhua Shen, Nicu Sebe

Research Collection School Of Computing and Information Systems

A nomaly detection aims at identifying data points which are rare or significantly different from the majority of data points. Many techniques are explored to build highly efficient and effective anomaly detection systems, but they are confronted with many difficulties when dealing with complex data, such as failing to capture intricate feature interactions or extract good feature representations. Deep-learning techniques have shown very promising performance in tackling different types of complex data in a broad range of tasks/problems, including anomaly detection. To address this new trend, we organized this Special Issue on Deep Learning for Anomaly Detection to cover the …


Development Of A Framework To Support Informed Shipbuilding Based On Supply Chain Disruptions, Katherine Smith, Rafael Diaz, Yuzhong Shen Jan 2022

Development Of A Framework To Support Informed Shipbuilding Based On Supply Chain Disruptions, Katherine Smith, Rafael Diaz, Yuzhong Shen

VMASC Publications

In addition to stresses induced by the Covid-19 pandemic, supply chains worldwide have been growing more complex while facing a continuous onslaught of disruptions. This paper presents an analysis and extension of a graph based model for modeling and simulating the effects of such disruptions. The graph based model combines a Bayesian network approach for simulating risks with a network dependency analysis approach for simulating the propagation of disruptions through the network over time. The initial analysis provides evidence supporting extension to for using a multi-layered approach allowing for the inclusion of cyclic features in supply chain models. Initial results …


Sources Of Variability And Uncertainty In Food-Energy-Water Nexus Systems, Heydi Calderon-Ambelis, Deepak R. Keshwani Jan 2022

Sources Of Variability And Uncertainty In Food-Energy-Water Nexus Systems, Heydi Calderon-Ambelis, Deepak R. Keshwani

Department of Biological Systems Engineering: Papers and Publications

A nexus approach contributes to the strategic allocation of resources to secure food, energy, and water for the world population. Integrated models considering the complex interactions across food, energy, and water (FEW) enhance decision-making and strategic planning towards resilience. However, a significant number of the existing integrated models leave unaddressed the inherent variability and uncertainty present in the FEW sectors. Here, we review the importance of characterizing variability over spatial and temporal scales and the importance of decreasing the uncertainty present within a FEW nexus systems. The review also discusses existing modeling tools that address variability and uncertainty on single …


Exploring Blockchain Adoption Supply Chains: Opportunities And Challenges, Adrian V. Gheorghe, Omer F. Keskin, Farinaz Sabz Ali Pour Jan 2022

Exploring Blockchain Adoption Supply Chains: Opportunities And Challenges, Adrian V. Gheorghe, Omer F. Keskin, Farinaz Sabz Ali Pour

Engineering Management & Systems Engineering Faculty Publications

In modern supply chains, acquisition often occurs with the involvement of a network of organizations. The resilience, efficiency, and effectiveness of supply networks are crucial for the viability of acquisition. Disruptions in the supply chain require adequate communication infrastructure to ensure resilience. However, supply networks do not have a shared information technology infrastructure that ensures effective communication. Therefore decision-makers seek new methodologies for supply chain management resilience. Blockchain technology offers new decentralization and service delegation methods that can transform supply chains and result in a more flexible, efficient, and effective supply chain. This report presents a framework for the application …


Characterizing Students’ Engineering Design Strategies Using Energy3d, Jasmine Singh, Viranga Perera, Alejandra Magana, Brittany Newell Apr 2021

Characterizing Students’ Engineering Design Strategies Using Energy3d, Jasmine Singh, Viranga Perera, Alejandra Magana, Brittany Newell

Discovery Undergraduate Interdisciplinary Research Internship

The goals of this study are to characterize design actions that students performed when solving a design challenge, and to create a machine learning model to help future students make better engineering design choices. We analyze data from an introductory engineering course where students used Energy3D, an open source computer-aided design software, to design a zero-energy home (i.e. a home that consumes no net energy over a period of a year). Student design actions within the software were recorded into text files. Using a sample of over 300 students, we first identify patterns in the data to assess how students …


Serial Interaction Of Primitive Magmas With Felsic And Mafic Crust Recorded By Gabbroic Dikes From The Antarctic Extension Of The Karoo Large Igneous Province, Jussi S. Heinonen, Arto V. Luttinen, Frank J. Spera, Saku K. Vuori, Wendy A. Bohrson Mar 2021

Serial Interaction Of Primitive Magmas With Felsic And Mafic Crust Recorded By Gabbroic Dikes From The Antarctic Extension Of The Karoo Large Igneous Province, Jussi S. Heinonen, Arto V. Luttinen, Frank J. Spera, Saku K. Vuori, Wendy A. Bohrson

Geological Sciences Faculty Scholarship

Two subvertical gabbroic dikes with widths of ~ 350 m (East-Muren) and ≥ 500 m (West-Muren) crosscut continental flood basalts in the Antarctic extension of the ~ 180 Ma Karoo large igneous province (LIP) in Vestfjella, western Dronning Maud Land. The dikes exhibit unusual geochemical profiles; most significantly, initial (at 180 Ma) εNd values increase from the dike interiors towards the hornfelsed wallrock basalts (from − 15.3 to − 7.8 in East-Muren and more gradually from − 9.0 to − 5.5 in West-Muren). In this study, we utilize models of partial melting and energy-constrained assimilation‒fractional crystallization in deciphering the …


Simiode Expo 2021 - Minicourse M-R2 - Delay Differential Equations In Epidemiology, Nsoki Mavinga Jan 2021

Simiode Expo 2021 - Minicourse M-R2 - Delay Differential Equations In Epidemiology, Nsoki Mavinga

Mathematics & Statistics Faculty Works

Many problems in epidemiology give rise to delay differential equations (DDEs). These are differential equations in which the current rate of change of the system depends not only on the current state but also on the history of the system; i.e. the system has memory. In this minicourse, we will discuss some key tools necessary to understand the applications involving DDEs. We will go through an example that illustrates the need and implementation of DDE in certain infectious diseases.


Grappling With Covid-19 By Imposing And Lifting Nonpharmaceutical Interventions In Sri Lanka: A Modeling Perspective, Mahesh Jayaweera, Chamath Dannongoda, Dilum Dilshan, Janith Dissanayake, Hasini Perera, Jagath Manatunge, Buddhika Gunawardana Jan 2021

Grappling With Covid-19 By Imposing And Lifting Nonpharmaceutical Interventions In Sri Lanka: A Modeling Perspective, Mahesh Jayaweera, Chamath Dannongoda, Dilum Dilshan, Janith Dissanayake, Hasini Perera, Jagath Manatunge, Buddhika Gunawardana

Physics and Astronomy Faculty Publications and Presentations

The imposition and lifting of non-pharmaceutical interventions (NPIs) to avert the COVID19 pandemic have gained popularity worldwide and will continue to be enforced until herd immunity is achieved. We developed a linear regression model to ascertain the nexus between the time-varying reproduction number averaged over a time window of six days (Rts) and seven NPIs: contact tracing, quarantine efforts, social distancing and health checks, hand hygiene, wearing of facemasks, lockdown and isolation, and health-related supports. Our analysis suggests that the second wave that emerged in Sri Lanka in early October 2020 continued despite numerous NPIs. The model indicates that the …


A Model-Based Exploratory Study Of Sulfur Dioxide Dispersions From Concentrated Animal Feeding Operations In The Southeastern United States, Jesse Winchester, Rezaul Mahmood, William Rodgers, Philip J. Silva, Nanh Lovanh, Joshua D. Durkee, John Loughrin Jan 2021

A Model-Based Exploratory Study Of Sulfur Dioxide Dispersions From Concentrated Animal Feeding Operations In The Southeastern United States, Jesse Winchester, Rezaul Mahmood, William Rodgers, Philip J. Silva, Nanh Lovanh, Joshua D. Durkee, John Loughrin

High Plains Regional Climate Center: Personnel Publications

In the Southeastern U. S. there are Concentrated Animal Feeding Operations (CAFOs) that emit a variety of gases, including SO2. Sulfur is emitted as reduced sulfur compounds and can react in the atmosphere to produce SO2. It is expected that the concentra­tion and spread of SO2 emissions from these sources would differ between wet and dry periods. In this research, SO2 emissions from locations representing CAFOs and its dispersion over the south­eastern U.S. were simulated through sensitivity experiments using the Weather Research and Forecasting-Chemistry (WRF- Chem) model. Simulations were performed for dry periods and …


Modeling Holocene Peatland Carbon Accumulation In North America, Qianlai Zhuang, Sirui Wang, Bailu Zhao, Filipe Aires, Catherine Prigent, Zicheng Yu, Jason K. Keller, Scott Bridgham Nov 2020

Modeling Holocene Peatland Carbon Accumulation In North America, Qianlai Zhuang, Sirui Wang, Bailu Zhao, Filipe Aires, Catherine Prigent, Zicheng Yu, Jason K. Keller, Scott Bridgham

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

Peatlands are a large carbon reservoir. Yet the quantification of their carbon stock still has a large uncertainty due to lacking observational data and well‐tested peatland biogeochemistry models. Here, a process‐based peatland model was calibrated using long‐term peat carbon accumulation data at multiple sites in North America. The model was then applied to quantify the peat carbon accumulation rates and stocks within North America over the last 12,000 years. We estimated that 85–174 Pg carbon was accumulated in North American peatlands over the study period including 0.37–0.76 Pg carbon in subtropical peatlands. During the period from 10,000 to 8,000 years …


Mathematical Modeling: Instructor And Student Resources, Marnie Phipps, Patty Wagner Jul 2020

Mathematical Modeling: Instructor And Student Resources, Marnie Phipps, Patty Wagner

Mathematics Ancillary Materials

This collection of student and instructor materials for Mathematical Modeling contains lesson plans, lecture slides, homework, learning goals, and student notes for the following major topics:

  • Linear Functions
  • Quadratic Functions
  • Exponential Functions
  • Logarithmic Functions

This is a materials update for a collection of materials created for a Round Nine ALG Textbook Transformation Grant.


Associated Dataset: Relative Impacts Of Global Changes And Regional Watershed Changes On The Inorganic Carbon Balance Of The Chesapeake Bay, Pierre St-Laurent, Marjorie A.M. Friedrichs Jun 2020

Associated Dataset: Relative Impacts Of Global Changes And Regional Watershed Changes On The Inorganic Carbon Balance Of The Chesapeake Bay, Pierre St-Laurent, Marjorie A.M. Friedrichs

Data

The dataset is a permanent archive of the results presented in the associated publication (St-Laurent et al. 2020, Biogeosciences).

This study used a biogeochemical module embedded in the Regional Ocean Modeling System (ROMS) to examine the relative impacts of global changes and regional watershed changes on the inorganic carbon balance of the Chesapeake Bay over the past century. The numerical experiments contrast the periods 1900-1914 and 2000-2014 and the results are fully described in the associated publication.


Evaluating Moose Alces Alces Population Response To Infestation Level Of Winter Ticks Dermacentor Albipictus, Daniel D. Ellingwood, Peter J. Pekins, Henry Jones, Anthony R. Musante May 2020

Evaluating Moose Alces Alces Population Response To Infestation Level Of Winter Ticks Dermacentor Albipictus, Daniel D. Ellingwood, Peter J. Pekins, Henry Jones, Anthony R. Musante

USDA Wildlife Services: Staff Publications

Many wildlife populations are experiencing a variety of environmental pressures due to the direct and indirect consequences of a changing climate. In the northeast, USA, moose Alces alces are declining in large part because of the increasing parasitism by winter tick Dermacentor albipictus, facilitated by high host density and optimal environmental conditions. To test this hypothesis, and better understand the influence of this interaction on the stability of the regional population, we constructed a population viability model using data collected through comprehensive survival and productivity studies in 2002–2005 and 2014–2018 in northern New Hampshire. Years of heavy tick infestation (epizootics) …


Geoscience Education Research: Trends And Applications In Undergraduate Courses, Diane Lally May 2020

Geoscience Education Research: Trends And Applications In Undergraduate Courses, Diane Lally

School of Natural Resources: Dissertations, Theses, and Student Research

Water resources are progressively under pressure from anthropogenic uses. Students need to learn about water systems as they are the future decision-makers and problem solvers who will be faced with unknown challenges in the future. The overarching goals of this dissertation were: 1) to identify ways in which geoscience instructors are incorporating systems thinking and science modeling in their teaching along with the accompanying methods for improving systems thinking and modeling implementation and 2) explore how the implementation of science modeling and systems thinking increase student evaluation of models and the understanding of hydrologic content. Data for these studies came …


Dot: Gene-Set Analysis By Combining Decorrelated Association Statistics, Olga A. Vsevolozhskaya, Min Shi, Fengjiao Hu, Dmitri V. Zaykin Apr 2020

Dot: Gene-Set Analysis By Combining Decorrelated Association Statistics, Olga A. Vsevolozhskaya, Min Shi, Fengjiao Hu, Dmitri V. Zaykin

Biostatistics Faculty Publications

Historically, the majority of statistical association methods have been designed assuming availability of SNP-level information. However, modern genetic and sequencing data present new challenges to access and sharing of genotype-phenotype datasets, including cost of management, difficulties in consolidation of records across research groups, etc. These issues make methods based on SNP-level summary statistics particularly appealing. The most common form of combining statistics is a sum of SNP-level squared scores, possibly weighted, as in burden tests for rare variants. The overall significance of the resulting statistic is evaluated using its distribution under the null hypothesis. Here, we demonstrate that this basic …


Analysis Of An Ode Model For Sea Turtle Populations With Temperature-Dependent Sex Determination, Lindsey A. Ukishima Apr 2020

Analysis Of An Ode Model For Sea Turtle Populations With Temperature-Dependent Sex Determination, Lindsey A. Ukishima

Student Publications

The sex of green sea turtles is determined by the temperature at which the eggs are incubated. Recent studies have shown that the sex ratios of sea turtle populations have changed over recent years, likely due to climate change, which has produced a more female-biased population. This paper finds the nonzero equilibrium point of the novel system developed by Herrera et a. (2019) and attempts to determine the stability of the population at that point.