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Full-Text Articles in Physical Sciences and Mathematics
An Ontology-Driven Semantic Mash-Up Of Gene And Biological Pathway Information: Application To The Domain Of Nicotine Dependence, Satya S. Sahoo, Olivier Bodenreider, Joni L. Rutter, Karen J. Skinner, Amit P. Sheth
An Ontology-Driven Semantic Mash-Up Of Gene And Biological Pathway Information: Application To The Domain Of Nicotine Dependence, Satya S. Sahoo, Olivier Bodenreider, Joni L. Rutter, Karen J. Skinner, Amit P. Sheth
Kno.e.sis Publications
Objectives: This paper illustrates how Semantic Web technologies (especially RDF, OWL, and SPARQL) can support information integration and make it easy to create semantic mashups (semantically integrated resources). In the context of understanding the genetic basis of nicotine dependence, we integrate gene and pathway information and show how three complex biological queries can be answered by the integrated knowledge base.
Methods: We use an ontology-driven approach to integrate two gene resources (Entrez Gene and HomoloGene) and three pathway resources (KEGG, Reactome and BioCyc), for five organisms, including humans. We created the Entrez Knowledge Model (EKoM), an information model in OWL …
Semantic Web: Promising Technologies, Current Applications & Future Directions, Amit P. Sheth
Semantic Web: Promising Technologies, Current Applications & Future Directions, Amit P. Sheth
Kno.e.sis Publications
No abstract provided.
Rdb2rdf: Incorporating Domain Semantics In Structured Data, Satya S. Sahoo
Rdb2rdf: Incorporating Domain Semantics In Structured Data, Satya S. Sahoo
Kno.e.sis Publications
No abstract provided.
At Issue, Bill Feireisen, George K. Thiruvathukal
At Issue, Bill Feireisen, George K. Thiruvathukal
Computer Science: Faculty Publications and Other Works
In this installment of At Issue, two of CiSE's editorial board members describe the magazine's current and future Web presence. We start with Bill Feiereisen's discussion of science on the Web and what it could mean for CiSE ("Are We There Yet?") and end with George Thiruvathukal's discussion of the challenges therein ("If We Build It, Will They Come?"). CiSE's official homepage is www.computer.org/cise; we gladly welcome comments with suggestions or feedback. You can contact lead editor (Jenny Stout; jstout@computer.org) or write to either Bill or George (their email addresses appear at the end of their respective essays).
Traveling The Semantic Web Through Space, Theme And Time, Amit P. Sheth, Matthew Perry
Traveling The Semantic Web Through Space, Theme And Time, Amit P. Sheth, Matthew Perry
Kno.e.sis Publications
In this installment of Semantics and Services, we further develop the idea of spatial, temporal, and thematic (STT) processing of semantic Web data and describe the Web infrastructure needed to support it. Starting from Ramesh Jain's vision of the EventWeb as a view of what's possible with a Web that better accommodates all three dimensions of event-related information (thematic, spatial, and temporal), we outline the architecture needed to support it and current research that aims to realize it.