Physical Sciences and Mathematics Commons^™

Clustering A Series Of Replicated Polyploid Gene Expression Experiments In Maize, Lingling An, Nicole C. Riddle, James A. Birchler, R. W. Doerge

Conference on Applied Statistics in Agriculture

Ploidy level is defined as the number of individual sets of chromosomes contained in a single cell. Many important crop plants, such as potato, soybean and wheat are polyploid. Although it is widely known that polyploidy is a frequent evolutionary event, it is not fully understand why polyploids have been so successful. In this work cluster analysis is employed to study gene expression changes in a maize inbred line (B73) across a range of polyploidy levels. The B73 ploidy series includes monoploid, diploid, triploid and tetraploid plants and consists of biological and technical replicates as measured by microarray technology. An …