Open Access. Powered by Scholars. Published by Universities.®

Physical Sciences and Mathematics Commons

Open Access. Powered by Scholars. Published by Universities.®

Articles 1 - 3 of 3

Full-Text Articles in Physical Sciences and Mathematics

An Autoencoder-Based Deep Learning Method For Genotype Imputation, Meng Song, Jonathan Greenbaum, Joseph Luttrell, Weihua Zhou, Chong Wu, Zhe Luo, Chuan Qiu, Lan Juan Zhao, Kuan Jui Su, Qing Tian, Hui Shen, Huixiao Hong, Ping Gong, Xinghua Shi, Hong Wen Deng, Chaoyang Zhang Nov 2022

An Autoencoder-Based Deep Learning Method For Genotype Imputation, Meng Song, Jonathan Greenbaum, Joseph Luttrell, Weihua Zhou, Chong Wu, Zhe Luo, Chuan Qiu, Lan Juan Zhao, Kuan Jui Su, Qing Tian, Hui Shen, Huixiao Hong, Ping Gong, Xinghua Shi, Hong Wen Deng, Chaoyang Zhang

Michigan Tech Publications

Genotype imputation has a wide range of applications in genome-wide association study (GWAS), including increasing the statistical power of association tests, discovering trait-associated loci in meta-analyses, and prioritizing causal variants with fine-mapping. In recent years, deep learning (DL) based methods, such as sparse convolutional denoising autoencoder (SCDA), have been developed for genotype imputation. However, it remains a challenging task to optimize the learning process in DL-based methods to achieve high imputation accuracy. To address this challenge, we have developed a convolutional autoencoder (AE) model for genotype imputation and implemented a customized training loop by modifying the training process with a …


Integrating Deep Learning And Hydrodynamic Modeling To Improve The Great Lakes Forecast, Pengfei Xue, Aditya Wagh, Gangfeng Ma, Yilin Wang, Yongchao Yang, Tao Liu, Chenfu Huang May 2022

Integrating Deep Learning And Hydrodynamic Modeling To Improve The Great Lakes Forecast, Pengfei Xue, Aditya Wagh, Gangfeng Ma, Yilin Wang, Yongchao Yang, Tao Liu, Chenfu Huang

Michigan Tech Publications

The Laurentian Great Lakes, one of the world’s largest surface freshwater systems, pose a modeling challenge in seasonal forecast and climate projection. While physics-based hydrodynamic modeling is a fundamental approach, improving the forecast accuracy remains critical. In recent years, machine learning (ML) has quickly emerged in geoscience applications, but its application to the Great Lakes hydrodynamic prediction is still in its early stages. This work is the first one to explore a deep learning approach to predicting spatiotemporal distributions of the lake surface temperature (LST) in the Great Lakes. Our study shows that the Long Short-Term Memory (LSTM) neural network, …


Jamming Detection And Classification In Ofdm-Based Uavs Via Feature- And Spectrogram-Tailored Machine Learning, Y. Li, J. Pawlak, J. Price, K. Al Shamaileh, Q. Niyaz, S. Paheding, V. Devabhaktuni Feb 2022

Jamming Detection And Classification In Ofdm-Based Uavs Via Feature- And Spectrogram-Tailored Machine Learning, Y. Li, J. Pawlak, J. Price, K. Al Shamaileh, Q. Niyaz, S. Paheding, V. Devabhaktuni

Michigan Tech Publications

In this paper, a machine learning (ML) approach is proposed to detect and classify jamming attacks against orthogonal frequency division multiplexing (OFDM) receivers with applications to unmanned aerial vehicles (UAVs). Using software-defined radio (SDR), four types of jamming attacks; namely, barrage, protocol-aware, single-tone, and successive-pulse are launched and investigated. Each type is qualitatively evaluated considering jamming range, launch complexity, and attack severity. Then, a systematic testing procedure is established by placing an SDR in the vicinity of a UAV (i.e., drone) to extract radiometric features before and after a jamming attack is launched. Numeric features that include signal-to-noise ratio (SNR), …