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Full-Text Articles in Physical Sciences and Mathematics

Retention Of Rising Oil Droplets In Density Stratification, Tracy L. Mandel, De Zhen Zhou, Lindsay Waldrop, Maxime Theillard, Dustin Kleckner, Shilpa Khatri Dec 2020

Retention Of Rising Oil Droplets In Density Stratification, Tracy L. Mandel, De Zhen Zhou, Lindsay Waldrop, Maxime Theillard, Dustin Kleckner, Shilpa Khatri

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

In this study, we present results from experiments on the retention of single oil droplets rising through a two-layer density stratification, with the goal of quantifying and parametrizing the impact of stratification on timescales that describe the delay in rising. These experiments confirm the significant slowdown observed in past literature of settling and rising particles and droplets in stratification, and these are the first experiments to study single liquid droplets as opposed to solid particles or bubbles. By tracking the motion of the droplets as they rise through a stratified fluid, we identify two new timescales which quantitatively describe this …


Effect Of Lockdown On Hcho And Trace Gases Over India During March 2020, Akshansha Chauhan, Ramesh P. Singh Nov 2020

Effect Of Lockdown On Hcho And Trace Gases Over India During March 2020, Akshansha Chauhan, Ramesh P. Singh

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

COVID-19 is one of the deadly Epidemics that has impacted people living in more than 200 countries. In order to mitigate the impact of COVID-19, India observed total lockdown in the first phase for a period of 21 days (24 March–13 May 2020), so that social distancing is maintained. However, this sudden decision severely affected the normal life of people. The air quality improved due to lockdown, some relaxation was given in different cities and within some areas in the city where the people were not affected by COVID-19. In this paper, we discuss results of detailed analysis of trace …


Modeling Holocene Peatland Carbon Accumulation In North America, Qianlai Zhuang, Sirui Wang, Bailu Zhao, Filipe Aires, Catherine Prigent, Zicheng Yu, Jason K. Keller, Scott Bridgham Nov 2020

Modeling Holocene Peatland Carbon Accumulation In North America, Qianlai Zhuang, Sirui Wang, Bailu Zhao, Filipe Aires, Catherine Prigent, Zicheng Yu, Jason K. Keller, Scott Bridgham

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

Peatlands are a large carbon reservoir. Yet the quantification of their carbon stock still has a large uncertainty due to lacking observational data and well‐tested peatland biogeochemistry models. Here, a process‐based peatland model was calibrated using long‐term peat carbon accumulation data at multiple sites in North America. The model was then applied to quantify the peat carbon accumulation rates and stocks within North America over the last 12,000 years. We estimated that 85–174 Pg carbon was accumulated in North American peatlands over the study period including 0.37–0.76 Pg carbon in subtropical peatlands. During the period from 10,000 to 8,000 years …


Mechanism And Chemoselectivity For Hocl-Mediated Oxidation Of Zinc-Bound Thiolates, Lindsay Zumwalt, Arden Perkins, O. Maduka Ogba Sep 2020

Mechanism And Chemoselectivity For Hocl-Mediated Oxidation Of Zinc-Bound Thiolates, Lindsay Zumwalt, Arden Perkins, O. Maduka Ogba

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

Quantum mechanical calculations reveal the preferred mechanism and origins of chemoselectivity for HOCl‐mediated oxidation of zinc‐bound thiolates implicated in bacterial redox sensing. Distortion/interaction models show that minimizing geometric distortion at the zinc complex during the rate‐limiting nucleophilic substitution step controls the mechanistic preference for OH over Cl transfer with HOCl and the chemoselectivity for HOCl over H2O2.


Mechanism And Chemoselectivity For Hocl-Mediated Oxidation Of Zinc-Bound Thiolates, Lindsay Zumwalt, Arden Perkins, O. Maduka Ogba Sep 2020

Mechanism And Chemoselectivity For Hocl-Mediated Oxidation Of Zinc-Bound Thiolates, Lindsay Zumwalt, Arden Perkins, O. Maduka Ogba

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

Quantum mechanical calculations reveal the preferred mechanism and origins of chemoselectivity for HOCl‐mediated oxidation of zinc‐bound thiolates implicated in bacterial redox sensing. Distortion/interaction models show that minimizing geometric distortion at the zinc complex during the rate‐limiting nucleophilic substitution step controls the mechanistic preference for OH over Cl transfer with HOCl and the chemoselectivity for HOCl over H2O2.


Functional Morphology Of Gliding Flight Ii. Morphology Follows Predictions Of Gliding Performance, Jonathan Rader, Tyson L. Hedrick, Yanyan He, Lindsay D. Waldrop Sep 2020

Functional Morphology Of Gliding Flight Ii. Morphology Follows Predictions Of Gliding Performance, Jonathan Rader, Tyson L. Hedrick, Yanyan He, Lindsay D. Waldrop

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

The evolution of wing morphology among birds, and its functional consequences, remains an open question, despite much attention. This is in part because the connection between form and function is difficult to test directly. To address this deficit, in prior work we used computational modeling and sensitivity analysis to interrogate the impact of altering wing aspect ratio, camber, and Reynolds number on aerodynamic performance, revealing the performance landscapes that avian evolution has explored. In the present work, we used a dataset of three-dimensionally scanned bird wings coupled with the performance landscapes to test two hypotheses regarding the evolutionary diversification of …


Design And Synthesis Of Core–Shell Microgels With One‐Step Clickable Crosslinked Cores And Ultralow Crosslinked Shells, Molla R. Islam, Chelsea Nguy, Sanika Pandit, L. Andrew Lyon Sep 2020

Design And Synthesis Of Core–Shell Microgels With One‐Step Clickable Crosslinked Cores And Ultralow Crosslinked Shells, Molla R. Islam, Chelsea Nguy, Sanika Pandit, L. Andrew Lyon

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

The present study is conducted to explore the engineering of core–shell microgels such that the core can be rapidly labeled with a variety of fluorophores, while the shell retains the softness needed in specific biomedical applications. Azide containing crosslinked core particles based on a crosslinked poly(N‐isopropylacrylamide) particle, using a one‐pot, multistep polymerization is synthesized. A core–shell microgel is then synthesized by growing a crosslinker‐free poly(N‐isopropylacrylamide)‐co‐acrylic acid (ULC10AAc) shell through a two‐step seed and feed polymerization. A simple “click” reaction between the azide present on the core and dibenzocyclooctyne containing fluorophores to make dyed core–shell …


Spatiotemporal Variations Of City-Level Carbon Emissions In China During 2000–2017 Using Nighttime Light Data, Yu Sun, Sheng Zheng, Yuzhe Wu, Uwe Schlink, Ramesh P. Singh Sep 2020

Spatiotemporal Variations Of City-Level Carbon Emissions In China During 2000–2017 Using Nighttime Light Data, Yu Sun, Sheng Zheng, Yuzhe Wu, Uwe Schlink, Ramesh P. Singh

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

China is one of the largest carbon emitting countries in the world. Numerous strategies have been considered by the Chinese government to mitigate carbon emissions in recent years. Accurate and timely estimation of spatiotemporal variations of city-level carbon emissions is of vital importance for planning of low-carbon strategies. For an assessment of the spatiotemporal variations of city-level carbon emissions in China during the periods 2000–2017, we used nighttime light data as a proxy from two sources: Defense Meteorological Satellite Program’s Operational Linescan System (DMSP-OLS) data and the Suomi National Polar-orbiting Partnership satellite’s Visible Infrared Imaging Radiometer Suite (NPP-VIIRS). The results …


Capsaicin Is A Negative Allosteric Modulator Of The 5-Ht3 Receptor, Eslam El Nebrisi, Tatiana Prytkova, Dietrich Ernst Lorke, Luke Howarth, Asma Hassan Alzaabi, Keun-Hang Susan Yang, Frank Christopher Howarth, Murat Oz Aug 2020

Capsaicin Is A Negative Allosteric Modulator Of The 5-Ht3 Receptor, Eslam El Nebrisi, Tatiana Prytkova, Dietrich Ernst Lorke, Luke Howarth, Asma Hassan Alzaabi, Keun-Hang Susan Yang, Frank Christopher Howarth, Murat Oz

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

In this study, effects of capsaicin, an active ingredient of the capsicum plant, were investigated on human 5-hydroxytryptamine type 3 (5-HT3) receptors. Capsaicin reversibly inhibited serotonin (5-HT)-induced currents recorded by two-electrode voltage clamp method in Xenopus oocytes. The inhibition was time- and concentration-dependent with an IC50 = 62 μM. The effect of capsaicin was not altered in the presence of capsazepine, and by intracellular BAPTA injections or trans-membrane potential changes. In radio-ligand binding studies, capsaicin did not change the specific binding of the 5-HT3 antagonist [3H]GR65630, indicating that it is a noncompetitive inhibitor of …


Long Term Air Quality Analysis In Reference To Thermal Power Plants Using Satellite Data In Singrauli Region, India, H. K. Romana, Ramesh P. Singh, D. P. Shukla Aug 2020

Long Term Air Quality Analysis In Reference To Thermal Power Plants Using Satellite Data In Singrauli Region, India, H. K. Romana, Ramesh P. Singh, D. P. Shukla

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

The exponentially growing population and related anthropogenic activities have led to modifications in local environment. The change in local environment, evolving pattern of land use, concentrations of greenhouse gases and aerosols alter the energy balance of our climate system. This alteration in climate is leading to pre-mature deaths worldwide. This study analyses the air quality of Singrauli region, Madhya Pradesh, India for the past 15 years. Otherwise known as Urjanchal “the energy capital” of India has been declared as critically polluted by CPCB. The study provides an updated list of thermal power plants in the study area and their emission …


Functional Morphology Of Gliding Flight I. Modeling Reveals Distinct Performance Landscapes Based On Soaring Strategies, Lindsay D. Waldrop, Yanyan He, Tyson L. Hedrick, Jonathan Rader Aug 2020

Functional Morphology Of Gliding Flight I. Modeling Reveals Distinct Performance Landscapes Based On Soaring Strategies, Lindsay D. Waldrop, Yanyan He, Tyson L. Hedrick, Jonathan Rader

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

The physics of flight influences the morphology of bird wings through natural selection on flight performance. The connection between wing morphology and performance is unclear due to the complex relationships between various parameters of flight. In order to better understand this connection, we present a holistic analysis of gliding flight that preserves complex relationships between parameters. We use a computational model of gliding flight, along with analysis by uncertainty quantification, to 1) create performance landscapes of gliding based on output metrics (maximum lift-to-drag ratio, minimum gliding angle, minimum sinking speed, lift coefficient at minimum sinking speed); and 2) predict what …


Global Atmospheric Budget Of Acetone: Air-Sea Exchange And The Contribution To Hydroxyl Radicals, Siyuan Wang, Eric C. Apel, Rebecca H. Schwantes, Kelvin H. Bates, Daniel J. Jacob, Emily V. Fischer, Rebecca S. Hornbrook, Alan J. Hills, Louisa K. Emmons, Laura L. Pan, Shawn Honomichl, Simone Tilmes, Jean‐François Lamarque, Mingxi Yang, Christa A. Marandino, E. S. Saltzman, Warren J. De Bruyn, Sohiko Kameyama, Hiroshi Tanimoto, Yuko Omori, Samuel R. Hall, Kirk Ullmann, Thomas B. Ryerson, Chelsea R. Thompson, Jeff Peischl, Bruce C. Daube, Róisín Commane, Kathryn Mckain, Colm Sweeney, Alexander B. Thames, David O. Miller, William H. Brune, Glenn S. Diskin, Joshua P. Digangi, Steven C. Wofsy Jul 2020

Global Atmospheric Budget Of Acetone: Air-Sea Exchange And The Contribution To Hydroxyl Radicals, Siyuan Wang, Eric C. Apel, Rebecca H. Schwantes, Kelvin H. Bates, Daniel J. Jacob, Emily V. Fischer, Rebecca S. Hornbrook, Alan J. Hills, Louisa K. Emmons, Laura L. Pan, Shawn Honomichl, Simone Tilmes, Jean‐François Lamarque, Mingxi Yang, Christa A. Marandino, E. S. Saltzman, Warren J. De Bruyn, Sohiko Kameyama, Hiroshi Tanimoto, Yuko Omori, Samuel R. Hall, Kirk Ullmann, Thomas B. Ryerson, Chelsea R. Thompson, Jeff Peischl, Bruce C. Daube, Róisín Commane, Kathryn Mckain, Colm Sweeney, Alexander B. Thames, David O. Miller, William H. Brune, Glenn S. Diskin, Joshua P. Digangi, Steven C. Wofsy

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

Acetone is one of the most abundant oxygenated volatile organic compounds (VOCs) in the atmosphere. The oceans impose a strong control on atmospheric acetone, yet the oceanic fluxes of acetone remain poorly constrained. In this work, the global budget of acetone is evaluated using two global models: CAM‐chem and GEOS‐Chem. CAM‐chem uses an online air‐sea exchange framework to calculate the bidirectional oceanic acetone fluxes, which is coupled to a data‐oriented machine‐learning approach. The machine‐learning algorithm is trained using a global suite of seawater acetone measurements. GEOS‐Chem uses a fixed surface seawater concentration of acetone to calculate the oceanic fluxes. Both …


Earth Observation And Sustainable Development Goals, Ramesh P. Singh Jun 2020

Earth Observation And Sustainable Development Goals, Ramesh P. Singh

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

"Planet Earth is a dynamic body, which is home to 7.8 billion people, and strong interactions exist between the human population and the Earth’s different components (land, ocean, biosphere, cryosphere and atmosphere). The impacts of such interactions are observed from the day-to-day changes in weather, solar radiation, cloudy conditions, poor visibility, rainfall and frequency of natural hazards around the globe. The dynamic nature of the Earth is evident at the ocean coast through the ocean waves, the nature of these waves varies from day-to-day and also morning to evening. For example, the heights of waves can now be predicted through …


Leaf Traits Can Be Used To Predict Rates Of Litter Decomposition, Marc Rosenfield, Jennifer L. Funk, Jason K. Keller, Catrina Clausen, Kimberlee Cyphers Jun 2020

Leaf Traits Can Be Used To Predict Rates Of Litter Decomposition, Marc Rosenfield, Jennifer L. Funk, Jason K. Keller, Catrina Clausen, Kimberlee Cyphers

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

Strong relationships exist between litter chemistry traits and rates of litter decomposition. However, leaf traits are more commonly found in online trait databases than litter traits and fewer studies have examined how well leaf traits predict litter decomposition rates. Furthermore, while bulk leaf nitrogen (N) content is known to regulate litter decomposition, few studies have explored the importance of N biochemistry fractions, such as protein and amino acid concentration. Here, we decomposed green leaves and naturally senesced leaf litter of nine species representing a wide range of leaf functional traits. We evaluated the ability of traits associated with leaf and …


Massive Peatland Carbon Banks Vulnerable To Rising Temperatures, A. M. Hopple, R. M. Wilson, M. Kolton, Cassandra A. Zalman, J. P. Chanton, J. Kostka, P. J. Hanson, Jason K. Keller, S. D. Bridgham May 2020

Massive Peatland Carbon Banks Vulnerable To Rising Temperatures, A. M. Hopple, R. M. Wilson, M. Kolton, Cassandra A. Zalman, J. P. Chanton, J. Kostka, P. J. Hanson, Jason K. Keller, S. D. Bridgham

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

Peatlands contain one-third of the world’s soil carbon (C). If destabilized, decomposition of this vast C bank could accelerate climate warming; however, the likelihood of this outcome remains unknown. Here, we examine peatland C stability through five years of whole-ecosystem warming and two years of elevated atmospheric carbon dioxide concentrations (eCO2). Warming exponentially increased methane (CH4) emissions and enhanced CH4 production rates throughout the entire soil profile; although surface CH4 production rates remain much greater than those at depth. Additionally, older deeper C sources played a larger role in decomposition following prolonged warming. Most …


De Novo Sequencing And Analysis Of Salvia Hispanica Tissue-Specific Transcriptome And Identification Of Genes Involved In Terpenoid Biosynthesis, James Wimberley, Joseph Cahill, Hagop S. Atamian Mar 2020

De Novo Sequencing And Analysis Of Salvia Hispanica Tissue-Specific Transcriptome And Identification Of Genes Involved In Terpenoid Biosynthesis, James Wimberley, Joseph Cahill, Hagop S. Atamian

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

Salvia hispanica (commonly known as chia) is gaining popularity worldwide as a healthy food supplement due to its low saturated fatty acid and high polyunsaturated fatty acid content, in addition to being rich in protein, fiber, and antioxidants. Chia leaves contain plethora of secondary metabolites with medicinal properties. In this study, we sequenced chia leaf and root transcriptomes using the Illumina platform. The short reads were assembled into contigs using the Trinity software and annotated against the Uniprot database. The reads were de novo assembled into 103,367 contigs, which represented 92.8% transcriptome completeness and a diverse set of Gene Ontology …


Changes In Atmospheric, Meteorological, And Ocean Parameters Associated With The 12 January 2020 Taal Volcanic Eruption, Feng Jing, Akshansa Chauhan, Ramesh P. Singh, Prasanjit Dash Mar 2020

Changes In Atmospheric, Meteorological, And Ocean Parameters Associated With The 12 January 2020 Taal Volcanic Eruption, Feng Jing, Akshansa Chauhan, Ramesh P. Singh, Prasanjit Dash

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

The Taal volcano erupted on 12 January 2020, the first time since 1977. About 35 mild earthquakes (magnitude greater than 4.0) were observed on 12 January 2020 induced from the eruption. In the present paper, we analyzed optical properties of volcanic aerosols, volcanic gas emission, ocean parameters using multi-satellite sensors, namely, MODIS (Moderate Resolution Imaging Spectroradiometer), AIRS (Atmospheric Infrared Sounder), OMI (Ozone Monitoring Instrument), TROPOMI (TROPOspheric Monitoring Instrument) and ground observations, namely, Argo, and AERONET (AErosol RObotic NETwork) data. Our detailed analysis shows pronounced changes in all the parameters, which mainly occurred in the western and south-western regions because the …


Methanethiol, Dimethyl Sulfide And Acetone Over Biologically Productive Waters In The Southwest Pacific Ocean, Sarah J. Lawson, Cliff S. Law, Mike J. Harvey, Thomas G. Bell, Carolyn F. Walker, Warren J. De Bruyn, Eric S. Saltzman Mar 2020

Methanethiol, Dimethyl Sulfide And Acetone Over Biologically Productive Waters In The Southwest Pacific Ocean, Sarah J. Lawson, Cliff S. Law, Mike J. Harvey, Thomas G. Bell, Carolyn F. Walker, Warren J. De Bruyn, Eric S. Saltzman

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

Atmospheric methanethiol (MeSHa), dimethyl sulfide (DMSa) and acetone (acetonea) were measured over biologically productive frontal waters in the remote southwest Pacific Ocean in summertime 2012 during the Surface Ocean Aerosol Production (SOAP) voyage. MeSHa mixing ratios varied from below the detection limit (< 10 ppt) up to 65 ppt and were 3 %–36 % of parallel DMSa mixing ratios. MeSHa and DMSa were correlated over the voyage (R2=0.3, slope = 0.07) with a stronger correlation over a coccolithophore-dominated phytoplankton bloom (R2=0.5, slope 0.13). The diurnal cycle for MeSHa shows similar behaviour to DMSa with mixing ratios …


Microwave Brightness Temperature Characteristics Of Three Strong Earthquakes In Sichuan Province, China, Feng Jing, Ramesh P. Singh, Yueju Cui, Ke Sun Jan 2020

Microwave Brightness Temperature Characteristics Of Three Strong Earthquakes In Sichuan Province, China, Feng Jing, Ramesh P. Singh, Yueju Cui, Ke Sun

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

Passive microwave remote sensing technology is an effective means to identify the thermal anomalies associated with earthquakes due to its penetrating capability through clouds compared with infrared sensors. However, observed microwave brightness temperature is strongly influenced by soil moisture and other surface parameters. In the present article, the segmented threshold method has been proposed to detect anomalous microwave brightness temperature associated with the strong earthquakes occurred in Sichuan province, China, an earthquake-prone area with high soil moisture. The index of microwave radiation anomaly (IMRA) computed by the proposed method is found to enhance prior to the three strong earthquakes, 2008 …


Air/Sea Transfer Of Highly Soluble Gases Over Coastal Waters, J. G. Porter, Warren J. De Bruyn, S. D. Miller, E. S. Saltzman Jan 2020

Air/Sea Transfer Of Highly Soluble Gases Over Coastal Waters, J. G. Porter, Warren J. De Bruyn, S. D. Miller, E. S. Saltzman

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

The deposition of soluble trace gases to the sea surface is not well studied due to a lack of flux measurements over the ocean. Here we report simultaneous air/sea eddy covariance flux measurements of water vapor, sulfur dioxide (SO2), and momentum from a coastal North Atlantic pier. Gas transfer velocities were on average about 20% lower for SO2 than for H2O. This difference is attributed to the difference in molecular diffusivity between the two molecules (D SO 2/D H 2O = 0.5), in reasonable agreement with bulk parameterizations in air/sea gas …