Physical Sciences and Mathematics Commons^™

Floodplains Provide Important Amphibian Habitat Despite Facing Multiple Ecological Threats, Meredith A. Holgerson, Adam Duarte, Marc P. Hayes, Michael J. Adams, Julie A. Tyson, Keith A. Douville, Angela Strecker

Environmental Sciences Faculty and Staff Publications

Floodplain ponds and wetlands are productive and biodiverse ecosystems, yet they face multiple threats including altered hydrology, land use change, and non-native species. Protecting and restoring important floodplain ecosystems requires understanding how organisms use these habitats and respond to altered environmental conditions. We developed Bayesian models to evaluate occupancy of six amphibian species across 103 off-channel aquatic habitats in the Chehalis River floodplain, Washington State, USA. The basin has been altered by changes in land use, reduced river–wetland connections, and the establishment of non-native American bullfrogs (Rana catesbeiana = Lithobates catesbeianus) and centrarchid fishes, all of which we …

Dataset For The Environmental Risk Assessment Of Chlorpyrifos To Chinook Salmon In Four Rivers Of Washington State, United States, Wayne G. Landis, Valerie R. Chu, Scarlett Graham, Meagan J. Harris, April J. Markiewicz, Chelsea J. Mitchell, Katherine E. Stackelberg, John Stark

Environmental Sciences Faculty and Staff Publications

Data files available below.

This data set is in support of Landis et al (in press) The integration of chlorpyrifos acetylcholinesterase inhibition, water temperature and dissolved oxygen concentration into a regional scale multiple stressor risk assessment estimating risk to Chinook salmon in four rivers in Washington State, USA. DOI: 10.1002/ieam.4199. In this research We estimated the risk to populations of Chinook salmon (Oncorhynchus tshawytscha) due to chlorpyrifos (CH), water temperature (WT) and dissolved oxygen concentrations (DO) in four watersheds in Washington State, USA. The watersheds included the Nooksack and Skagit Rivers in the Northern Puget Sound, the Cedar …

Integration Of Chlorpyrifos Acetylcholinesterase Inhibition, Water Temperature, And Dissolved Oxygen Concentration Into A Regional Scale Multiple Stressor Risk Assessment Estimating Risk To Chinook Salmon, Wayne G. Landis, Valerie R. Chu, Scarlett E. Graham, Meagan J. Harris, April J. Markiewicz, Chelsea J. Mitchell, Katherine E. Von Stackelberg, John D. Stark

IETC Publications

We estimated the risk to populations of Chinook salmon (Oncorhynchus tshawytscha) due to chlorpyrifos (CH), water temperature (WT), and dissolved oxygen concentration (DO) in 4 watersheds in Washington State, USA. The watersheds included the Nooksack and Skagit Rivers in the Northern Puget Sound, the Cedar River in the Seattle–Tacoma corridor, and the Yakima River, a tributary of the Columbia River. The Bayesian network relative risk model (BN‐RRM) was used to conduct this ecological risk assessment and was modified to contain an acetylcholinesterase (AChE) inhibition pathway parameterized using data from CH toxicity data sets. The completed BN‐RRM estimated risk at a …

Building Arc Crust: Plutonic To Volcanic Connections In An Extensional Oceanic Arc, The Southern Alisitos Arc, Baja California, Rebecca A. Morris, Susan M. Debari, Cathy Busby, Sarah Medynski, Brian R. Jicha

Geology Faculty Publications

The ~50 km long Rosario segment of the Cretaceous Alisitos oceanic arc terrane provides undeformed three-dimensional exposures of the upper 7 km of an oceanic extensional arc, where crustal generation processes are recorded in both the volcanic and underlying plutonic rocks. These exceptional exposures allow for the study of the physical and chemical links between the rock units and help constrain the differentiation processes active during the growth and evolution of arc crust. This study focuses on the southern third of the Rosario segment, previously referred to as the southern volcano-bounded basin, and its plutonic underpinnings. Upper crustal rocks in …

Isolating And Quantifying The Role Of Developmental Noise In Generating Phenotypic Variation, Maria Kiskowski, Tilmann Glimm, Nickolas Moreno, Tony Gamble, Ylenia Chiari

Mathematics Faculty Publications

Genotypic variation, environmental variation, and their interaction may produce variation in the developmental process and cause phenotypic differences among individuals. Developmental noise, which arises during development from stochasticity in cellular and molecular processes when genotype and environment are fixed, also contributes to phenotypic variation. While evolutionary biology has long focused on teasing apart the relative contribution of genes and environment to phenotypic variation, our understanding of the role of developmental noise has lagged due to technical difficulties in directly measuring the contribution of developmental noise. The influence of developmental noise is likely underestimated in studies of phenotypic variation due to …

Quick Guide To Plant Families Of Western Washington, Maggie Hayward, John D. Tuxill, James M. Helfield

WWU Honors College Senior Projects

This guide is an expanded version of a booklet designed to help students identify native plants in western Washington. It has been expanded to include invasive and ruderal taxa commonly found in riparian areas. The purpose of this guide is to provide practical help for identifying plant families, and to facilitate a basic understanding of plant morphology. By observing morphological characteristics such as leaf arrangement and structure, the user can narrow an unidentified species down to the family level. Because this book does not go to the species level, it is meant to be used as a companion to other …

Do Men Matter? In Statistics, Probably, Michael Kelly

WWU Honors College Senior Projects

In statistical genetics, there are several parameters of a dataset which a researcher might, but which are difficult to estimate in practice. In this paper, we will be focusing on allele frequencies, null alleles, inbreeding coefficients and, to a certain extent, beta values. A common technique for obtaining these values, developed by Amy Anderson and her co-workers, is to jointly estimate all of them using an EM-algorithm and the method of maximum likelihood. Despite this technique being effective in general, it is currently unable to deal with males at X-linked markers. The purpose of this project is to modify the …

Preliminary Impacts Of Constructed Log Jams On Streambed Topography And Bed Temperature On The South Fork Nooksack River, Sam Kaiser

WWU Honors College Senior Projects

Salmon are an essential part of the culture, ecology and economy of the Pacific Northwest region of North America, but populations of some ecotypes are declining. One specific population, the Puget Sound chinook (Oncorhynchus tshawytscha), is listed as threatened under terms of the U.S. Endangered Species Act (ESA). The decline of this ecotype has implications not only for humans but also for all links of the ecosystem such as the populations of southern resident killer whales (Orcinus orca) which prey predominately on chinook salmon. Major threats to these fish include overharvest and habitat degradation due to …

Equity In Stem: Utilizing Student Experience To Better Inform Policy And Practice, Natasha Hessami

WWU Honors College Senior Projects

As women and people of color continue to pursue higher education and other advanced degrees, the STEM field consistently lags behind in diverse representation and leadership. There is a critical need to address the structural barriers marginalized groups face to accessing and succeeding in STEM and invest both time and money into innovative student-centered solutions. This project outlines the development of the CSE Student Ambassador program and implementation recommendations, the development and presentation of seminars focused on equity in the Biology and Chemistry departments, and general recommendations for faculty to make classroom and lab spaces more inclusive.

Lake Whatcom Monitoring Project 2017/2018 Report, Robin A. Matthews, Michael Hilles, Joan Pickens, Robert J. Mitchell, Geoffrey B. Matthews

Lake Whatcom Annual Reports

This report describes the results from the 2017/2018 Lake Whatcom monitoring program conducted by the Institute for Watershed Studies at Western Washington University (www.wwu.edu/iws). The major objectives in 2017/2018 were to continue long-term baseline water quality monitoring in Lake Whatcom and its major tributaries; collect storm runoff water quality data from representative streams in the watershed; and continue collection of hydrologic data from Austin and Smith Creeks.

Subduction Initiation And Early Evolution Of The Easton Metamorphic Suite, Northwest Cascades, Washington, Jeremy L. Cordova, Sean R. Mulcahy, Elizabeth R. Schermer, Laura E. Webb

Geology Faculty Publications

The Easton metamorphic suite, in the northwest Cascades of Washington State, preserves an inverted metamorphic sequence with ultramafic rocks underlain by amphibolite and high-temperature blueschist juxtaposed above low-temperature blueschists. The sequence is interpreted as a metamorphic sole and younger accreted rocks that formed during and after the initiation of Farallon plate subduction beneath North America in Jurassic time. Two high-temperature deformation events are recorded in the metamorphic sole at ∼10 kbar and ∼760 °C to 590 °C between >167 and 164 Ma. High-temperature blueschist partly overprints the amphibolite but may have accreted separately at ∼530 °C between ca. 165 and …

Particle Size Specific Magnetic Properties Across The Norwegian‐Greenland Seas: Insights Into The Influence Of Sediment Source And Texture On Bulk Magnetic Records, Robert G. Hatfield, Benjamin H. Wheeler, Brendan T. Reilly, Joseph S. Stoner, Bernard A. Housen

Geology Faculty Publications

We make fundamental observations of the particle size variability of magnetic properties from 71 core tops that span the southern Greenland and Norwegian Seas. These data provide the first detailed regional characterization of how bulk magnetic properties vary with sediment texture, sediment source, and sediment transport. Magnetic susceptibility (MS) and hysteresis parameters were measured on the bulk sediment and the five constituent sediment particle size fractions (clay, fine silt, medium silt, coarse silt, and sand). The median MS value of the medium silt size fraction is ~3–5 times higher than that of the sand and clay size fractions and results …

Moses Lake Algae Monitoring Project 2018 Final Report, Robin A. Matthews, Joan Pickens, Eric J. Lawrence

Moses Lake

Moses Lake is a shallow, hypereutrophic lake in Grant County, Washington (Carroll and Cusimano, 2001), with a surface area of 6,800 acres (27.5 km2 ), total volume of 130,000 acre-ft (160.4 × 106 m3), average depth of 19 ft. (5.8 m), and maximum depth of 38 ft. (11.6 m; Dion, et al., 1976). The lake is situated adjacent to the city of Moses Lake and drains into Crab Creek, a tributary of Columbia River. The lake is a popular recreational destination for fishing, boating, swimming, and camping.

Moses Lake develops nuisance blooms of cyanobacteria during the summer and fall. The …

Heart Lake Monitoring Project 2018 Final Report, Michael P. Lawlor, Robin A. Matthews, Joan Pickens

Heart Lake

Heart Lake is a 61.4 acre lake (0.248 km2

) located about 2 miles (3.2 km) south of Anacortes off of Heart Lake Road (Table 1; Figure 1). Heart Lake is separated into two basins and has a total shoreline length of 1.64 miles (2.645 km). The western basin is slightly larger and deeper that the eastern basin, but the maximum depth and average depth of the lake is only 5.8 and 2.7 meters, respectively. There are six seasonal sources of water flowing into the lake, including streams, wetlands, and runoff. The lake is situated at the headwaters for the …

Using Bayesian Networks To Predict Risk To Estuary Water Quality And Patterns Of Benthic Environmental Dna In Queensland, Scarlett E. Graham, Anthony A. Chariton, Wayne G. Landis

Institute of Environmental Toxicology & Chemistry Publications

Predictive modeling can inform natural resource management by representing stressor-response pathways in a logical way and quantifying the effects on selected endpoints. This study demonstrates a risk assessment model using the Bayesian network-relative risk model (BNRRM) approach to predict water quality and; for the first time, eukaryote environmental DNA (eDNA) data as a measure of benthic community structure. Environmental DNA sampling is a technique for biodiversity measurements that involves extracting DNA from environmental samples, amplicon sequencing a targeted gene, in this case the 18s rDNA gene which targets eukaryotes, and matching the sequences to organisms. Using a network of probability …

Temporal And Spatial Variability Of Carbonate Chemistry In A Tillamook Bay Tributary: Tracing Acidification From The River To The Bay, Abigail Ernest-Beck

WWU Honors College Senior Projects

Coastal acidification from rising atmospheric carbon dioxide can be exacerbated by local factors such as land inputs of inorganic carbon and nutrients. In Tillamook Bay, OR, the possibility of local factors enhancing acidification and impacting oyster aquaculture in the bay is a concern due to extensive agriculture in the watershed. The US EPA has been monitoring water conditions in Tillamook Bay tributaries since the summer of 2016, and preliminary findings showed increased dissolved inorganic carbon (DIC) downstream of agricultural areas. To determine the causes of elevated DIC, changes attributed to land-based inputs must be distinguished from natural temporal variability and …