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Full-Text Articles in Physical Sciences and Mathematics

Qcd Equation Of State With 2+1 Flavors Of Improved Staggered Quarks, James E. Hetrick, C. Bernard May 2007

Qcd Equation Of State With 2+1 Flavors Of Improved Staggered Quarks, James E. Hetrick, C. Bernard

All Faculty Articles - School of Engineering and Computer Science

We report results for the interaction measure, pressure, and energy density for nonzero-temperature QCD with 2+1 flavors of improved staggered quarks. In our simulations, we use a Symanzik improved gauge action and the Asqtad O (a2) improved staggered quark action for lattices with temporal extent Nt = 4 and 6. The heavy quark mass ms is fixed at approximately the physical strange quark mass and the two degenerate light quarks have masses mud ≈ 0.1ms or 0.2ms. The calculation of the thermodynamic observables employs the integral method where energy density and pressure are obtained by integration over the interaction measure.


Does Spelling Count? Reflections On Writing In The Mathematics Classroom, Christopher D. Goff Mar 2007

Does Spelling Count? Reflections On Writing In The Mathematics Classroom, Christopher D. Goff

College of the Pacific Faculty Presentations

The written word is scarce in the stereotypical mathematics course, which instead emphasizes the routine solving of problems. But having students explain their solutions in writing can pave the way to more critical mathematical thinking. This talk will examine the use of writing as a tool to learn mathematics. We will reflect on: reasons to incorporate writing in a mathematics class; which courses lend themselves to writing assignments; what types of assignments to use; samples of student work; and whether using writing can actually improve student learning. Depending on the assignments, writing can also incorporate several “Basic Principles” of AMATYC’s …


Solution Conformations Of Three Small Cluster Oligosaccharide Mimetics (Scom) From D-Glucosamine, D-Altrosamine, And (-)-Quinic Acid, Q. L. Nguyen, L. Olmstead, S. Bains, Andreas H. Franz Jan 2007

Solution Conformations Of Three Small Cluster Oligosaccharide Mimetics (Scom) From D-Glucosamine, D-Altrosamine, And (-)-Quinic Acid, Q. L. Nguyen, L. Olmstead, S. Bains, Andreas H. Franz

College of the Pacific Faculty Articles

Three small cluster oligosaccharide mimetics were synthesized, and their CDCl3 solution conformations were determined with NMR experiments. In this paper, we confirmed conformational similarities in rings A and B in all three compounds, and we provide the overall solution geometries. In all cases, an unusual cyclohexane twist-boat conformation with longrange 4 J-(W)-coupling was observed. The origin of the bias towards the twist-boat was attributed primarily to the fused ring system between the cyclohexane ring and the dioxacyclopentane (acetal) including hydrogen bonding. Temperature-annealed molecular dynamics simulations complemented the NMR experiments and supported the overall assignment.


Sulfite Reduction In Mycobacteria, Rachel Pinto, Joseph S. Harrison, Tsungda Hsu, William R. Jacobs Jr., Thomas S. Leyh Jan 2007

Sulfite Reduction In Mycobacteria, Rachel Pinto, Joseph S. Harrison, Tsungda Hsu, William R. Jacobs Jr., Thomas S. Leyh

College of the Pacific Faculty Articles

Mycobacterium tuberculosis places an enormous burden on the welfare of humanity. Its ability to grow and its pathogenicity are linked to sulfur metabolism, which is considered a fertile area for the development of antibiotics, particularly because many of the sulfur acquisition steps in the bacterium are not found in the host. Sulfite reduction is one such mycobacterium-specific step and is the central focus of this paper. Sulfite reduction in Mycobacterium smegmatis was investigated using a combination of deletion mutagenesis, metabolite screening, complementation, and enzymology. The initial rate parameters for the purified sulfite reductase from M. tuberculosis were determined under strict …