Physical Sciences and Mathematics Commons^™

Improving Structural Features Prediction In Protein Structure Modeling, Ashraf Yaseen

Computer Science Theses & Dissertations

Proteins play a vital role in the biological activities of all living species. In nature, a protein folds into a specific and energetically favorable three-dimensional structure which is critical to its biological function. Hence, there has been a great effort by researchers in both experimentally determining and computationally predicting the structures of proteins.

The current experimental methods of protein structure determination are complicated, time-consuming, and expensive. On the other hand, the sequencing of proteins is fast, simple, and relatively less expensive. Thus, the gap between the number of known sequences and the determined structures is growing, and is expected to …

A Longitudinal Metric Study Of Postgresql Software Archeology In Open Source, Terry Franklin Byrum

Computer Science Theses & Dissertations

Open source software development is credited as the basic fuel powering much of the Internet, especially the Web. While many organizations rely heavily on open source, few studies have focused on the dynamics of development methodology. This document contains the results of a longitudinal metric study of the open source database PostgreSQL representing an 8 year period of community development. This study is software archeology, excavating bits of an Internet community, a cultural group, for understanding. Longitudinally, McCabe's cyclomatic complexity and Halstead's software science change tempo in accordance with PostgreSQL's maturity, though meritocracy practices of open source might suggest greater …

A Semantic-Based Middleware For Multimedia Collaborative Applications, Agustin Jose Gonzalez

Computer Science Theses & Dissertations

The Internet growth and the performance increase of desktop computers have enabled large-scale distributed multimedia applications. They are expected to grow in demand and services and their traffic volume will dominate. Real-time delivery, scalability, heterogeneity are some requirements of these applications that have motivated a revision of the traditional Internet services, the operating systems structures, and the software systems for supporting application development. This work proposes a Java-based lightweight middleware for the development of large-scale multimedia applications. The middleware offers four services for multimedia applications. First, it provides two scalable lightweight protocols for floor control. One follows a centralized model …

A Family Of Hierarchical Encoding Techniques For Image And Video Communications, Samah A. Senbel

Computer Science Theses & Dissertations

As the demand for image and video transmission and interactive multimedia applications continues to grow, scalable image and video compression that has robust behavior over unreliable channels are of increasing interest. These desktop applications require scalability as a main feature due to its heterogeneous nature, since participants in an interactive multimedia application have different needs and processing power. Also, the encoding and decoding algorithm complexity must be low due to the practical considerations of low-cost low-power receiver terminals. This requires image and video encoding techniques that jointly considers compression, scalability, robustness, and simplicity.

In this dissertation, we present a family …

Multiple Streams Synchronization In Collaborative Multimedia Systems, Emilia Stoica

Computer Science Theses & Dissertations

With the recent increase of the communication bandwidth and processor power, new types of applications have emerged. Among them, there are multimedia application, in which users are able to control, combine, and manipulate different types of media, such as text, sound, video, computer graphics, and animation. A key requirement in any multimedia application is to synchronize the delivery of various media streams to the user. To achieve this, the sender has to provide the temporal relations between the streams as they are captured. Since the receiver uses this information in streams presentation, its accuracy is very important.

Our main contribution …

An Investigation Of Software Reliability Models, Pamela Elaine Bowman

Computer Science Theses & Dissertations

Many software reliability models have been promoted in the literature in an attempt to provide a meaningful response to the growing need to know the reliability of software during and after the development process. However, there are well-founded concerns as to the accuracy of the individual model, as well as to the choice of which model to use for a particular program. A recent experiment based on the debugging history of a partially debugged program used a gold version to label a debugging graph from replicated data. This experiment concluded that presenting the replicated data to the models in a …

A System For Structured Management Of Hypermedia Resources For The World Wide Web, Kevin L. Marlowe

Computer Science Theses & Dissertations

The World Wide Web (WWW) is arguably the preferred method for disseminating information across the Internet. Most of the work to support the advancement of WWW technology has focused on servers used in storing and retrieving information, browsers for viewing this information, and editors or filters for creating the information.

One area which has received little attention is that of actually managing this information at the local host. This thesis describes the development of a means for organizing local data prior to its publishing on the WWW, a method for gathering local pages together and preparing them for distribution, and …

Software Reliability Issues: An Experimental Approach, Mary Ann Hoppa

Computer Science Theses & Dissertations

In this thesis, we present methodologies involving a data structure called the debugging graph whereby the predictive performance of software reliability models can be analyzed and improved under laboratory conditions. This procedure substitutes the averages of large sample sets for the single point samples normally used as inputs to these models and thus supports scrutiny of their performances with less random input data.

Initially, we describe the construction of an extensive database of empirical reliability data which we derived by testing each partially debugged version of subject software represented by complete or partial debugging graphs. We demonstrate how these data …

Single Object Detection Using Multiple Sensors With Unknown Noise Distributions, Shaofen Chen

Computer Science Theses & Dissertations

We consider the design of an object classification system that identifies single objects using a system of sensors; each sensor outputs a random vector, according to an unknown (noise) probability distribution, in response to a sensed object. We consider a special class of systems, called the linearly separable systems, where the error-free sensor outputs corresponding to distinct objects can be mapped into disjoint intervals on real line. Given a set of sensor outputs corresponding to known objects, we show that a detection rule α_emp that approaches the correct rule with a high probability can be computed. We show …

A Case Study In Software Reuse: The Rntds Architecture, Barry J. Stevens

Computer Science Theses & Dissertations

It has been asserted that the most significant gains in software productivity will come from increased levels of software reuse. Some economic models for predicting savings through software reuse exist, but none are based on actual project experience. This paper surveys those models and presents the results of a case study, the Restructured Naval Tactical Data Systems (RNTDS) architecture, in the light of those models. According to the models, software reuse via the RNTDS architecture has enabled the production of fourteen major computer programs at five to twenty-one percent of the cost to create them without software reuse. Organizational characteristics …

Generic Specifications In Lil And In Ada Via Analogies, George Chester Harrison

Computer Science Theses & Dissertations

We address the problem of .making verifiable specifications in generic program units in the Ada Programming Language*. We illustrate the methodologies of LIL proposed by Joseph Goguen and Justify the use of such a specification languages using analogy programming originally proposed by Nachum Dershowitz. The work in these areas is new and noticeably incomplete. We address our concern about the reusability of Ada software in a programming environment that includes a specification language like LIL. * Ada is a registered trademark of the U.S. Government (Ada Joint Program Office)