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Physical Sciences and Mathematics Commons

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Marquette University

Neuroscience

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Computational Modeling Of Biological Neural Networks On Gpus: Strategies And Performance, Byron Galbraith Jul 2010

Computational Modeling Of Biological Neural Networks On Gpus: Strategies And Performance, Byron Galbraith

Master's Theses (2009 -)

Simulating biological neural networks is an important task for computational neuroscientists attempting to model and analyze brain activity and function. As these networks become larger and more complex, the computational power required grows significantly, often requiring the use of supercomputers or compute clusters. An emerging low-cost, highly accessible alternative to many of these resources is the Graphics Processing Unit (GPU) - specialized massively-parallel graphics hardware that has seen increasing use as a general purpose computational accelerator thanks largely due to NVIDIA's CUDA programming interface. We evaluated the relative benefits and limitations of GPU-based tools for large-scale neural network simulation and …