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Full-Text Articles in Physical Sciences and Mathematics

El Fin, George K. Thiruvathukal Oct 2016

El Fin, George K. Thiruvathukal

Computer Science: Faculty Publications and Other Works

EIC George K. Thiruvathukal says farewell in his final "from the editors" message.


Software Engineering For Science, Jeffrey C. Carver, Neil P. Chue Hong, George K. Thiruvathukal Oct 2016

Software Engineering For Science, Jeffrey C. Carver, Neil P. Chue Hong, George K. Thiruvathukal

Computer Science: Faculty Publications and Other Works

Software Engineering for Science provides an in-depth collection of peer-reviewed chapters that describe experiences with applying software engineering practices to the development of scientific software. It provides a better understanding of how software engineering is and should be practiced, and which software engineering practices are effective for scientific software.

The book starts with a detailed overview of the Scientific Software Lifecycle, and a general overview of the scientific software development process. It highlights key issues commonly arising during scientific software development, as well as solutions to these problems.

The second part of the book provides examples of the use of …


Metrics Dashboard Services: A Framework For Analyzing Free/Open Source Team Repositories, Shilpika Shilpika, George K. Thiruvathukal, Nicholas Hayward, Konstantin Läufer Aug 2016

Metrics Dashboard Services: A Framework For Analyzing Free/Open Source Team Repositories, Shilpika Shilpika, George K. Thiruvathukal, Nicholas Hayward, Konstantin Läufer

Computer Science: Faculty Publications and Other Works

No abstract provided.


Does A Taste Of Computing Increase Computer Science Enrollment?, Steven Mcgee, Randi Mcgee-Tekula, Jennifer Duck, Taylor White, Ronald I. Greenberg, Lucia Dettori, Dale F. Reed, Brenda Wilkerson, Don Yanek, Andrew Rasmussen, Gail Chapman Aug 2016

Does A Taste Of Computing Increase Computer Science Enrollment?, Steven Mcgee, Randi Mcgee-Tekula, Jennifer Duck, Taylor White, Ronald I. Greenberg, Lucia Dettori, Dale F. Reed, Brenda Wilkerson, Don Yanek, Andrew Rasmussen, Gail Chapman

Computer Science: Faculty Publications and Other Works

This study investigated the impact of the Exploring Computer Science (ECS) program on the likelihood that students of all races and gender would pursue further computer science coursework in high school. ECS is designed to foster deep engagement through equitable inquiry around computer science concepts. If the course provides a meaningful and relevant experience, it will increase students' expectancies of success as well as increase their perceived value for the field of computer science. Using survey research, we sought to measure whether the relevance of students' course experiences influenced their expectancies and value and whether those attitudes predicted whether students …


Lack Of Attention To Singular (Or Atomic) Requirements Despite Benefits For Quality, Metrics And Management, William L. Honig, Shingo Takada, Natsuko Noda Jul 2016

Lack Of Attention To Singular (Or Atomic) Requirements Despite Benefits For Quality, Metrics And Management, William L. Honig, Shingo Takada, Natsuko Noda

Computer Science: Faculty Publications and Other Works

There are seemingly many advantages to being able to identify, document, test, and trace single or “atomic” requirements. Why then has there been little attention to the topic and no widely used definition or process on how to define atomic requirements?

Definitions of requirements and standards focus on user needs, system capabilities or functions; some definitions include making individual requirements singular or without the use of conjunctions. In a few cases there has been a description of atomic system events or requirements. This work is surveyed here although there is no well accepted and used best practice for generating atomic …


Pythagorean Combinations For Lego Robot Building., Ronald I. Greenberg Jul 2016

Pythagorean Combinations For Lego Robot Building., Ronald I. Greenberg

Computer Science: Faculty Publications and Other Works

This paper provides tips for LEGO robot construction involving bracing or gear meshing along a diagonal using standard Botball kits.


Metrics, Software Engineering, Small Systems – The Future Of Systems Development, William L. Honig Jun 2016

Metrics, Software Engineering, Small Systems – The Future Of Systems Development, William L. Honig

Computer Science: Faculty Publications and Other Works

In this talk I will introduce the importance of metrics, or measures, and the role they play in the development of high quality computer systems. I will review some key mega trends in computer science over the last three decades and then explain why I believe the trend to small networked systems, along with metrics and software engineering will define the future of high technology computer based systems.

I first learned about metrics at the Bell System where everything was measured. Metrics can be understood easily if you think of them as measures, for example of calories or salt in …


Guest Editors' Introduction: Best Of Respect, Part 2, Tiffany Barnes, Jamie Payton, George K. Thiruvathukal, Jeff Forbes, Kristy Elizabeth Boyer May 2016

Guest Editors' Introduction: Best Of Respect, Part 2, Tiffany Barnes, Jamie Payton, George K. Thiruvathukal, Jeff Forbes, Kristy Elizabeth Boyer

Computer Science: Faculty Publications and Other Works

The guest editors introduce best papers on broadening participation in computing from the RESPECT'15 conference. The five articles presented here are part two of a two-part series representing research on broadening participation in computing. These articles study participation in intersectional ways, through the perceptions and experiences of African-American middle school girls, the sense of belonging in computing for LGBTQ students, the impact of a STEM scholarship and community development program for low-income and first-generation college students, a leadership development program, and how African-American women individually take leadership to enable their success in computing.


An Example Of Atomic Requirements - Login Screen, William L. Honig May 2016

An Example Of Atomic Requirements - Login Screen, William L. Honig

Computer Science: Faculty Publications and Other Works

A simple example of what an atomic or individual or singular requirement statement should be. Using the example of the familiar login screen, shows the evolution from a low quality initial attempt at requirements to a complete atomic requirement statement. Introduces the idea of a system glossary to support the atomic requirement.


Atomic Requirements Quick Notes, William L. Honig, Shingo Takada May 2016

Atomic Requirements Quick Notes, William L. Honig, Shingo Takada

Computer Science: Faculty Publications and Other Works

Working paper on atomic requirements for systems development and the importance of singular, cohesive, individual requirements statements. Covers possible definitions of atomic requirements, and their characteristics. Atomic requirements improve many parts of the development process from requirements to testing and contracting.


Introduction To Atomic Requirements, William L. Honig Apr 2016

Introduction To Atomic Requirements, William L. Honig

Computer Science: Faculty Publications and Other Works

An introduction to requirements and the importance of making single atomic requirements statements. Atomic requirements have advantages and improve the requirements process, support requirement verification and validation, enable traceability, support testability of systems, and provide management advantages.

Why has there been so little emphasis on atomic requirements?


Guest Editors' Introduction: Research On Equity And Sustained Participation In Engineering, Computing, And Technology, Tiffany Barnes, Jamie Payton, George K. Thiruvathukal, Kristy Elizabeth Boyer, Jeff Forbes Mar 2016

Guest Editors' Introduction: Research On Equity And Sustained Participation In Engineering, Computing, And Technology, Tiffany Barnes, Jamie Payton, George K. Thiruvathukal, Kristy Elizabeth Boyer, Jeff Forbes

Computer Science: Faculty Publications and Other Works

The guest editors introduce best papers on broadening participation in computing from the RESPECT'15 conference. The five articles presented here are part one of a two-part series representing research on broadening participation in computing at all levels of education: from K-12 schools through graduate school, with a focus on diversity with regard to gender, race, and ethnicity.


Requirements Metrics - Definitions Of A Working List Of Possible Metrics For Requirements Quality, William L. Honig Mar 2016

Requirements Metrics - Definitions Of A Working List Of Possible Metrics For Requirements Quality, William L. Honig

Computer Science: Faculty Publications and Other Works

A work in progress to define a metrics set for requirements. Metrics are defined that apply to either the entire requirements set (requirements document as a whole) or individual atomic (or singular, individual) requirements statements. Requirements are identified with standard names and a identification scheme and include both subjective and objective measures.

An example metric for the full set of requirements: Rd2 - Requirements Consistency, Is the set of atomic requirements internally consistent, with no contradictions, no duplication between individual requirements? An example of a metric for a single requirement: Ra4 - Requirement Verifiability, How adequately can this requirement be …


Requirements Quick Notes, William L. Honig, Shingo Takada Mar 2016

Requirements Quick Notes, William L. Honig, Shingo Takada

Computer Science: Faculty Publications and Other Works

A short introduction to requirements and their role in system development. Includes industry definition of requirements, overview of basic requirements process including numbering of requirements, ties to testing, and traceability. An introduction to requirements quality attributes (correct, unambiguous, etc.) Includes references to requirements process, numbering, and quality papers.


The Impact Of The Exploring Computer Science Instructional Model In Chicago Public Schools, Lucia Dettori, Ronald I. Greenberg, Steven Mcgee, Dale Reed Mar 2016

The Impact Of The Exploring Computer Science Instructional Model In Chicago Public Schools, Lucia Dettori, Ronald I. Greenberg, Steven Mcgee, Dale Reed

Computer Science: Faculty Publications and Other Works

As part of the Taste of Computing project, the Exploring Computer Science (ECS) instructional model has been expanded to many high schools in the Chicago Public Schools system. We report on initial outcomes showing that students value the ECS course experience, resulting in increased awareness of and interest in the field of computer science. We compare these results by race and gender. The data provide a good basis for exploring the impact of meaningful computer science instruction on students from groups underrepresented in computing; of several hundred students surveyed, nearly half were female, and over half were Hispanic or African-American.


The Need For Research In Broadening Participation, Tiffany Barnes, George K. Thiruvathukal Mar 2016

The Need For Research In Broadening Participation, Tiffany Barnes, George K. Thiruvathukal

Computer Science: Faculty Publications and Other Works

Underrepresentation in computing is a global problem, marked by a disturbing lack of access to computing resources and education among people underrepresented by race, ethnicity, gender, income, disability, and sexual-orientation status. It is urgent that we address this divide between those with and without the knowledge to create computational artifacts or even basic functional literacy. Important alliances for broadening participation (BP) are catalyzing efforts to engage more people in computing, but they are not enough. We need solid research as well.


A Polyglot Approach To Bioinformatics Data Integration: A Phylogenetic Analysis Of Hiv-1, Steven Reisman, Thomas Hatzopoulous, Konstantin Läufer, George K. Thiruvathukal, Catherine Putonti Jan 2016

A Polyglot Approach To Bioinformatics Data Integration: A Phylogenetic Analysis Of Hiv-1, Steven Reisman, Thomas Hatzopoulous, Konstantin Läufer, George K. Thiruvathukal, Catherine Putonti

Computer Science: Faculty Publications and Other Works

As sequencing technologies continue to drop in price and increase in throughput, new challenges emerge for the management and accessibility of genomic sequence data. We have developed a pipeline for facilitating the storage, retrieval, and subsequent analysis of molecular data, integrating both sequence and metadata. Taking a polyglot approach involving multiple languages, libraries, and persistence mechanisms, sequence data can be aggregated from publicly available and local repositories. Data are exposed in the form of a RESTful web service, formatted for easy querying, and retrieved for downstream analyses. As a proof of concept, we have developed a resource for annotated HIV-1 …