Open Access. Powered by Scholars. Published by Universities.®
Physical Sciences and Mathematics Commons™
Open Access. Powered by Scholars. Published by Universities.®
Articles 1 - 2 of 2
Full-Text Articles in Physical Sciences and Mathematics
Universal Hypergraphs., Michael Deren
Universal Hypergraphs., Michael Deren
Electronic Theses and Dissertations
In this thesis, we study universal hypergraphs. What are these? Let us start with defining a universal graph as a graph on n vertices that contains each of the many possible graphs of a smaller size k < n as an induced subgraph. A hypergraph is a discrete structure on n vertices in which edges can be of any size, unlike graphs, where the edge size is always two. If all edges are of size three, then the hypergraph is said to be 3-uniform. If a 3-uniform hypergraph can have edges colored one of a colors, then it is called a …
A Predictive Model Which Uses Descriptors Of Rna Secondary Structures Derived From Graph Theory., Alissa Ann Rockney
A Predictive Model Which Uses Descriptors Of Rna Secondary Structures Derived From Graph Theory., Alissa Ann Rockney
Electronic Theses and Dissertations
The secondary structures of ribonucleic acid (RNA) have been successfully modeled with graph-theoretic structures. Often, simple graphs are used to represent secondary RNA structures; however, in this research, a multigraph representation of RNA is used, in which vertices represent stems and edges represent the internal motifs. Any type of RNA secondary structure may be represented by a graph in this manner. We define novel graphical invariants to quantify the multigraphs and obtain characteristic descriptors of the secondary structures. These descriptors are used to train an artificial neural network (ANN) to recognize the characteristics of secondary RNA structure. Using the ANN, …