Physical Sciences and Mathematics Commons^™

Topics In Analytic Number Theory And Consecutive Primitive Roots, Nelson Carella

Publications and Research

This monograph proves the existence of various configurations of $(k+1)$-tuples of consecutive and quasi consecutive primitive roots $n+a_0, n+a_1, n+a_2, ,,,, n+a_k$ in the finite field $\F_p$, where $a_0,a_1, \ldots, a_k$ is a fixed $(k+1)$-tuples of distinct integers.

High-Resolution Cryo-Electron Microscopy Structure Of Photosystem Ii From The Mesophilic Cyanobacterium, Synechocystis Sp. Pcc 6803, Christopher J. Gisriel, Jimin Wang, Jinchan Liu, David A. Flesher, Krystle M. Reiss, Hao-Li Huang, Ke R. Yang, William H. Armstrong, M. R. Gunner, Victor S. Batista, Richard J. Debus, Gary W. Brudvig

Publications and Research

Photosystem II (PSII) enables global-scale, light-driven water oxidation. Genetic manipulation of PSII from the mesophilic cyanobacterium Synechocystis sp. PCC 6803 has provided insights into the mechanism of water oxidation; however, the lack of a highresolution structure of oxygen-evolving PSII from this organism has limited the interpretation of biophysical data to models based on structures of thermophilic cyanobacterial PSII. Here, we report the cryo-electron microscopy structure of PSII from Synechocystis sp. PCC 6803 at 1.93-Å resolution. A number of differences are observed relative to thermophilic PSII structures, including the following: the extrinsic subunit PsbQ is maintained, the C terminus of the …

Cuny York College–Hosted Nasa Stem Outreach Program Graduates Over 30,000 Students – The Legacy Continues Amidst The Covid-19 Pandemic, Nazrul I. Khandaker

Publications and Research

The NASA MUREP (Minority University Research and Education Project) and SEMAA (Science, Engineering, Mathematics and Aerospace Academy) at York College CUNY (City University of New York), borough of Queens, New York City, recently earned a distinction by graduating over 30,000 underrepresented minority students since 1999 with the culmination of the fall 2021 session! African American students are leading the graduates, followed by Hispanic and Asian students being almost equal in proportion. The primary objective of both MAA (MUREP Aerospace Academy) and SEMAA is getting underrepresented minority students exposure to innovative STEM content and prepare many of them to enter higher …

Messiness: Automating Iot Data Streaming Spatial Analysis, Christopher White, Atilio Barreda Ii

Publications and Research

The spaces we live in go through many transformations over the course of a year, a month, or a day; My room has seen tremendous clutter and pristine order within the span of a few hours. My goal is to discover patterns within my space and formulate an understanding of the changes that occur. This insight will provide actionable direction for maintaining a cleaner environment, as well as provide some information about the optimal times for productivity and energy preservation.

Using a Raspberry Pi, I will set up automated image capture in a room in my home. These images will …

Measurement Of Speed Of Sound Using Smartphones, Omotolani Adelekan

Publications and Research

The goal of this experiment is to determine the speed of sound in air. To measure the speed of sound, I used two smartphones and an app called Phyphox This app uses the microphone of the smartphone to detect the time between two acoustic events The “acoustic stopwatch” tool on the app is used to measure the time between two sound signals These two signals are produced by hand clapping In this experiment, the speed of sound is determined using the time of flight method This method is based on measuring the time delay between the generation and the detection …

An Analysis Of Comparison-Based Sorting Algorithms, Jacob M. Gomez, Edgar Aponte, Brad Isaacson

Publications and Research

Our names are Edgar Aponte and Jacob Gomez and we are Applied Mathematics students at City Tech. Our mentor is Prof. Isaacson and we conducted an analysis of comparison-based sorting algorithms, meaning that they can sort items of any type for which a “less-than” relation is defined. We implemented 24 comparison-based sorting algorithms and elaborated on 6 for our poster. We analyzed the running times of these sorting algorithms with various sets of unsorted data and found that introspective sort and timsort were the fastest and most efficient, with introspective sort being the very fastest.

Analyze And Examine Wildfire Events In California, Aleena Hoodith, Sakim Zaman, Safoan Hossain, Jiehao Huang

Publications and Research

•A wildfire is an unplanned, unwanted, uncontrolled fire in an area of combustible vegetation starting in rural areas and urban areas. •Recent studies have shown that the effect of anthropogenic climate change has fueled the wildfire events, leading to an increase in the annual burned areas and number of events. •California is one of the places having the most deadliest and destructive wildfire seasons. With the global warming effect of 1°C since 1850, the 20 largest wildfires events that have occurred in California, 8 of them were in 2017. (Center For Climate And Energy Solutions) •Climate change is primarily caused …

Role Played By Edge-Defects In The Optical Properties Of Armchair Graphene Nanoribbons, Thi-Nga Do, Godfrey Gumbs, Danhong Huang, Bui D. Hoi, Po-Hsin Shih

Publications and Research

We explore the implementation of specific optical properties of armchair graphene nanoribbons (AGNRs) through edge-defect manipulation. This technique employs the tight-binding model in conjunction with the calculated absorption spectral function. Modification of the edge states gives rise to the diverse electronic structures with striking changes in the band gap and special flat bands at low energy. The optical-absorption spectra exhibit unique excitation peaks, and they strongly depend on the type and period of the edge extension. Remarkably, there exist the unusual transition channels associated with the flat bands for selected edge-modified systems. We discovered the special rule governing how the …

Me3al-Mediated Domino Nucleophilic Addition/Intramolecular Cyclisation Of 2-(2-Oxo-2-Phenylethyl)Benzonitriles With Amines; A Convenient Approach For The Synthesis Of Substituted 1-Aminoisoquinolines, Krishna M. S. Adusumalli, Lakshmi N.S. Konidena, Hima B. Gandham, Krishnaiah Kumari, Krishan R. Valluru, Satya K.R. Nidasanametla, Venkateswara R. Battula, Hari K. Namballa

Publications and Research

A simple and efficient protocol for the construction of 1-aminoisoquinolines was achieved by treating 2-(2-oxo-2- phenylethyl)benzonitriles with amines in the presence of Me 3 Al. The reaction proceeds via a domino nucleophilic addition with subsequent intramolecular cyclisation. This method provides a wide variety of substituted 1-aminoisoquinolines with good func- tional group tolerance. Furthermore, the synthetic utility of this protocol was demonstrated in the successful synthesis of the anti- tumor agent CWJ-a-5 in gram scale.

Treatment Selection Using Prototyping In Latent-Space With Application To Depression Treatment, Akiva Kleinerman, Ariel Rosenfeld, David Benrimoh, Robert Fratila, Caitrin Armstrong, Joseph Mehltretter, Eliyahu Shneider, Amit Yaniv-Rosenfeld, Jordan Karp, Charles F. Reynolds, Gustavo Turecki, Adam Kapelner

Publications and Research

Machine-assisted treatment selection commonly follows one of two paradigms: a fully personalized paradigm which ignores any possible clustering of patients; or a sub-grouping paradigm which ignores personal differences within the identified groups. While both paradigms have shown promising results, each of them suffers from important limitations. In this article, we propose a novel deep learning-based treatment selection approach that is shown to strike a balance between the two paradigms using latent-space prototyping. Our approach is specifically tailored for domains in which effective prototypes and sub-groups of patients are assumed to exist, but groupings relevant to the training objective are not …

The Temperature-Dependent Conformational Ensemble Of Sars-Cov-2 Main Protease (Mpro), Ali Ebrahim, Blake T. Riley, Desigan Kumaran, Babak Andi, Martin R. Fuchs, Sean Mcsweeney, Daniel A. Keedy

Publications and Research

The COVID-19 pandemic, instigated by the SARS-CoV-2 coronavirus, continues to plague the globe. The SARS-CoV-2 main protease, or M^pro, is a promising target for development of novel antiviral therapeutics. Previous X-ray crystal structures of M^pro were obtained at cryogenic temperature or room temperature only. Here we report a series of high-resolution crystal structures of unliganded M^pro across multiple temperatures from cryogenic to physiological, and another at high humidity. We interrogate these datasets with parsimonious multiconformer models, multi-copy ensemble models, and isomorphous difference density maps. Our analysis reveals a temperature-dependent conformational landscape for M^pro, including …

Late Pleistocene And Early Holocene Sea-Level History And Glacial Retreat Interpreted From Shell-Bearing Marine Deposits Of Southeastern Alaska, Usa, James F. Baichtal, Alia J. Lesnek, Risa J. Carlson, Nicholas S. Schmuck, Jane L. Smith, Dennis J. Landwehr, Jason P. Briner

Publications and Research

We leverage a data set of >720 shell-bearing marine deposits throughout southeastern Alaska (USA) to develop updated relative sea-level curves that span the past ~14,000 yr. This data set includes site location, elevation, description when avail-able, and 436 14C ages, 45 of which are published here for the first time. Our sea-level curves suggest a peripheral forebulge developed west of the retreating Cordilleran Ice Sheet (CIS) margin between ca. 17,000 and 10,800 calibrated yr B.P. By 14,870 ± 630 to 12,820 ± 340 cal. yr B.P., CIS mar-gins had retreated from all of southeastern Alaska’s fjords, channels, and passages. At …

Tailoring Plasmon Excitations In Alpha − T 3 Armchair Nanoribbons, Andrii Iurov, Liubov Zhemchuzhna, Godfrey Gumbs, Danhong Huang, Paula Fekete, Farhana Anwar, Dipendra Dahal, Nicholas Weekes

Publications and Research

We have calculated and investigated the electronic states, dynamical polarization function and the plasmon excitations for α − T ₃ nanoribbons with armchair-edge termination. The obtained plasmon dispersions are found to depend significantly on the number of atomic rows across the ribbon and the energy gap which is also determined by the nanoribbon geometry. The bandgap appears to have the strongest effect on both the plasmon dispersions and their Landau damping. We have determined the conditions when relative hopping parameter α of an α − T ₃ lattice has a strong effect on the plasmons which makes our material distinguished …

Tectonic And Geotechnical Review Of Bengal Basin For Seismic Risk Assessment In Bangladesh, Mir Fazlul Karim, Jnana Ranjan Kayal, Daya Shanker, Nazrul I. Khandaker, Arif M. Sikder, M Zillur Rahman, Muhammad Qumrul Hassan

Publications and Research

Four major geotectonic provinces of the basin are recognized: 1) the continental slope to the west of the Hinge Zone, 2) the stable shelf, 3) the deep central trough (Sylhet-Hatiya) and 4) the Chittagong-Tripura fold belt to the east. The ~300 km long Dauki Fault demarcates the elevated Shillong Plateau, part of the Indian Shield to the north and the deep basin to the south. The basin experienced three strong to major intraplate earthquakes: a) 1885 Bengal earthquake (rev. Mw 6.8) close to the Hinge Zone, b) 1918 Srimangal earthquake (rev. Mw 7.1) on the Sylhet (trough) fault and c) …

The Importance Of Monitoring To Assess The Impact Of Climate Change On Groundwater Resources In Bangladesh, Muhammad Qumrul Hassan, Anwar Zahid, Nazrul I. Khandaker

Publications and Research

Groundwater is the major source of fresh water across much of the world, but there has been very little study on the impacts of climate change on this precious and finite resource. Rising levels of greenhouse gases are likely to increase the global average surface temperature over the next 100 years, raise sea levels and reduce soil moisture. The amount of water stored in the soil is fundamentally important to agriculture and influences the rate of actual evaporation, groundwater recharge and runoff. Rising sea levels would cause the tidal saltwater wedge to intrude further upstream in rivers, with resulting changes …

Statistical Analysis Of Groundwater Level Fluctuation Of The Urban And Peri-Urban Area Of Gazipur District, Bangladesh, Nowshin Ahsan Priyanka, Atika Rahman Akji, Anwar Zahid, Muhammad Qumrul Hassan, Jowaher Raza, Nazrul I. Khandaker

Publications and Research

Groundwater is the primary source for drinking, municipal, irrigation, and industrial water supply in Bangladesh. Due to unplanned urbanization and rapidly growing industries, the degradation situation has become perilous over time. Dhaka and its peri-urban regions are having drastic changes in groundwater (GW) levels. This work reviewed GW level fluctuation in the peri-urban area, which is now severely experiencing the detrimental impact of rapid urbanization and industrialization. Detail statistical investigation and Landsat image interpretation of the study area was conducted. Analysis and prediction of water level trends were conducted using variations of Mann Kendell tests. Gazipur Sadar (an upazila or …

Multi-Faceted Geoscience Research Using Open Access Resources: The Successful Participation Of K9-16 Students, Nazrul I. Khandaker, Noshin Sharmili, Omadevi Singh, Gurwinder Sahota, Sol De Leon, Matthew Khargie, Ali Zarine, Krishna Mahabir, Adacia Teemal, Mildred M. Selby

Publications and Research

Students interested in geosciences, for the most part, missed out their traditional field- based research activities due to strict social distancing, travel restrictions and/or lacking financial support. An absence of physical laboratory opportunities forced students to choose topics deemed doable through online research. Available data from online sources on extreme weather related case studies, flooding, droughts, groundwater depletion in urban and suburban areas, coastal erosion rate, sealevel rise, landslides, earthquakes, volcanic eruptions, and atmospheric pollution became quite handy and lucrative. Readily available pertinent data sources enabled K9-16 students to conduct summer research at “stay home” situations. Selective peer mentoring was …

Determination Of Sustainable Zones For Groundwater Abstraction From The Multi-Layered Aquifer System In The Bengal Basin, Bangladesh, Anwar Zahid, Muhammad Qumrul Hassan, Nazrul I. Khandaker

Publications and Research

The use of deep groundwater (±300 m deep) is becoming an important issue in the Bengal Basin, due to both water quality problems and an acute shortage of available water in upper aquifers. In southeastern Bangladesh, multi-layered aquifer conditions exist with arsenic contamination at shallow depths, and high iron and brackish groundwater occurring mainly in the deeper layers. Many previous studies have offered explanations for the high concentrations of dissolved arsenic in groundwater - most of which proposed that the arsenic is derived from geo-genic sources and its release in groundwater is through natural processes, not the result of anthropogenic …

Leveraging The Popularity Of Virtual Conferencing Due To The Covid-19 Pandemic To Create New Opportunities For Stem Education, Andrew Singh, Nazrul I. Khandaker, Violeta Escandon Correa, Omadevi Singh, Ariel Skobelsky, Farhan Tanvir, Brian Sukhnandan, Matthew Khargie, Elton Selby, Masud Ahmed

Publications and Research

Due to the COVID-19 pandemic, virtual learning has become a necessity for K9-16 education. Virtual classwork has been administered through platforms such as Google Classroom, Clever, and iReady. During the summer of 2021, the City University of New York (C.U.N.Y) York College campus hosted its NASA MAA MUREP (Minority University Research and Education Project Aerospace Academy) program virtually using a combination of Zoom, Google Docs, and even Canva, which some students requested as a more intuitive alternative to Microsoft PowerPoint. Students were mentored to use the scientific method to explore their interests in the STEM field, with a geoscience or …

Addressing The Learning Loss During The Covid-19 Pandemic Through The Adaptation Of Virtual Platforms, Nazrul I. Khandaker, Anika Nawar Mayeesha, Violeta Escandon Correa, Toralv Munro, Andrew Singh, Matthew Khargie, Ality Aghedo, Jasmin Budhan, Krishna Mahabir, Belal A. Sayeed

Publications and Research

The York College-hosted NASA MAA (MUREP AEROSPACE ACADEMY) has always played a pivotal role in minimizing the learning loss during the summer months, which was heightened during the pandemic. Support from AT&T, Con Edison and NASA enabled the MAA program at York College to offer a virtual STEM education with an earth science concentration to 1000 plus underserved K1-12 students from the community last summer, including 160 high school students. Two factors made this endeavor fruitful: allowing additional time to engage in STEM lessons and increasing self-motivation to successfully accomplish assigned tasks. Students built partnerships and resolved technical issues with …

Assessment Of The Impacts Of Urbanization On Land-Use And Land-Cover Changes Using Remote Sensing And Python At Gazipur District, Bangladesh, Atika Rahman Akji, Nowshin Ahsan Priyanka, Anwar Zahid, Muhammad Qumrul Hassan, Jowaher Raza, Nazrul I. Khandaker

Publications and Research

Urbanization has been the central demographic trend, not only in the Asia-Pacific region, but also for the entire world. Local geo-mapping is the vital tool for analyses of land-use and land-cover. This study attempts to classify land-use in unsupervised settings and create land-cover map by using open-source Landsat data integrated with GIS technologies and other ancillary resources. This work concentrates on Gazipur Sadar (an upazila or sub-district of the Gazipur District in central Bangladesh, part of the Dhaka Division) and Kaliakair, which are rapidly growing unplanned urban and industrial zones. The usage of python coding greatly assisted accomplishing the post-classification …

Wave Function Identity: A New Symmetry For 2-Electron Systems In An Electromagnetic Field, Marlina Slamet, Viraht Sahni

Publications and Research

Stationary-state Schrödinger-Pauli theory is a description of electrons with a spin moment in an external electromagnetic field. For 2-electron systems as described by the Schrödinger-Pauli theory Hamiltonian with a symmetrical binding potential, we report a new symmetry operation of the electronic coordinates. The symmetry operation is such that it leads to the equality of the transformed wave function to the wave function. This equality is referred to as the Wave Function Identity. The symmetry operation is a two-step process: an interchange of the spatial coordinates of the electrons whilst keeping their spin moments unchanged, followed by an inversion. The Identity …

Development Of Predictive Models For Water Budget Simulations Of Closed-Basin Lakes: Case Studies Of Lakes Azuei And Enriquillo On The Island Of Hispaniola, Mahrokh Moknatian, Michael Piasecki

Publications and Research

The historical water level fluctuations of the two neighboring Caribbean lakes of Azuei (LA) and Enriquillo (LE) on Hispaniola have shown random periods of synchronous and asynchronous behaviors, with both lakes exhibiting independent dynamics despite being exposed to the same climatic forces and being directly next to each other. This paper examines their systems' main drivers and constraints, which are used to develop numerical models for these two lakes. The water balance approach was employed to conceptually model the lakes on an interannual scale and examine the assumptions of surface and subsurface processes. These assumptions were made based on field …

Globe Mosquito Habitat Mapper Citizen Science Data 2017–2020, Russanne Low, Rebecca Boger, Peder Nelson, Matteo Kimura

Publications and Research

The GLOBE Program's GLOBE Observer application is a free citizen science mobile data collection and visualization tool compatible with iOS and Android operating systems. Citizen scientists armed with the app can report the mosquito larval habitats they identify using the GLOBE Mosquito Habitat Mapper tool. This data can complement the climate, weather, and land cover data obtained from satellite measurements by scientists who develop risk models for mosquito-borne diseases. Public participation in mosquito surveillance research provides the opportunity to obtain the volume, velocity and variety of data needed to fight the threat of vector-borne diseases, especially in under-resourced communities with …

Modeling Covid-19 Spread In Small Colleges, Riti Bahl, Nicole Eikmeier, Alexandra Fraser, Matthew Junge, Felicia Keesing, Kukai Nakahata, Lily Reeves

Publications and Research

We develop an agent-based model on a network meant to capture features unique to COVID-19 spread through a small residential college. We find that a safe reopening requires strong policy from administrators combined with cautious behavior from students. Strong policy includes weekly screening tests with quick turnaround and halving the campus population. Cautious behavior from students means wearing facemasks, socializing less, and showing up for COVID-19 testing. We also find that comprehensive testing and facemasks are the most effective single interventions, building closures can lead to infection spikes in other areas depending on student behavior, and faster return of test …

Teaching Machine Learning For The Physical Sciences: A Summary Of Lessons Learned And Challenges, Viviana Acquaviva

Publications and Research

This paper summarizes some challenges encountered and best practices established in several years of teaching Machine Learning for the Physical Sciences at the undergraduate and graduate level. I discuss motivations for teaching ML to physicists, desirable properties of pedagogical materials, such as accessibility, relevance, and likeness to real-world research problems, and give examples of components of teaching units.

An Adaptive Cryptosystem On A Finite Field, Awnon Bhowmik, Unnikrishnan Menon

Publications and Research

Owing to mathematical theory and computational power evolution, modern cryptosystems demand ingenious trapdoor functions as their foundation to extend the gap between an enthusiastic interceptor and sensitive information. This paper introduces an adaptive block encryption scheme. This system is based on product, exponent, and modulo operation on a finite field. At the heart of this algorithm lies an innovative and robust trapdoor function that operates in the Galois Field and is responsible for the superior speed and security offered by it. Prime number theorem plays a fundamental role in this system, to keep unwelcome adversaries at bay. This is a …

Case 3847 – Simopithecus Oswaldi Andrews, 1916 (Currently Theropithecus Oswaldi; Mammalia, Primates, Cercopithecidae), Proposed Conservation By Reversal Of Precedence With Cynocephalus Atlanticus Thomas, 1884., Eric Delson, David M. Alba, Stephen R. Frost, Dagmawit Abebe Getahun, Christopher C. Gilbert

Publications and Research

The purpose of this application, under Articles 23.9.3 and 81.1 of the Code, is to conserve the usage of the species-group name Simopithecus oswaldi Andrews, 1916 by giving it precedence over its senior subjective synonym Cynocephalus atlanticus Thomas, 1884. Theropithecus is a common to dominant member of the extinct primate community across Africa after 4 million years ago (Jablonski & Frost, 2010) and often co-occurred with extinct humans (Hominini); fossils are also known rarely across Eurasia (Roberts et al., 2014). Most fossil samples are currently included in Theropithecus oswaldi (Andrews, 1916), which is often divided into chrono-geographic subspecies. Cynocephalus atlanticus …

Transmission Telescope Optical Dynamic Alignment, Viviana Vladutescu, Aaron J. Swank, Dzu K. Le, Calvin R. Robinson, O. Scott Sands

Publications and Research

The Integrated Radio Optical Communication System (iROC) is designed to transmit data between Mars and Earth by means of radio waves at 32.67 GHz (Ka band) and laser beam (LB) at 1550 nm, both transmitted via a combined telescope/antenna called a teletenna. The iROC terminal will provide “beaconless” operations to allow full function from the outer planets. In order to point without the aid of an uplink beacon, the proof of concept presented here is addressing the need for an accurate determination and control of the relative position of the LB with respect to a reference star.

The experiment presented …

Designing Atomic Edge Structures In 2d Transition Metal Dichalcogenides For Improved Catalytic Activity, Raymond R. Unocic, Xiahan Sang, Guoxiang Hu, Victor Fung, Jingsong Huang, Matthew G. Boebinger, Kai Xiao, Panchapakesan Ganesh

Publications and Research

Designing new materials for functional applications depends upon our ability to understand and correlate the materials structure and chemistry to functional material properties. This is even more important for two-dimensional (2D) materials where thicknesses are on the order of a single atom to a few-atomic layers; therefore, any structural or chemical modification at these length scales can have a profound effect on modifying physical and chemical properties. 2D transition metal dichalcogenides (TMDs) such as MoS2 have emerged as a promising catalyst for the hydrogen evolution reaction with defects such as vacancies and edges being linked to high catalytic active sites …